EY711231

Overview
NameEY711231
Unique NameEY711231
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length568
Libraries
Library NameType
Sweet orange fruit, development stadium (3 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY711231 vs. ExPASy Swiss-Prot
Match: LEUD_THEYD (3-isopropylmalate dehydratase small subunit OS=Thermodesulfovibrio yellowstonii (strain ATCC 51303 / DSM 11347 / YP87) GN=leuD PE=3 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 7.353e-11
Identity = 38/91 (41.76%), Postives = 56/91 (61.54%), Query Frame = 2 
Query:    2 VALGAAGCSAVVAESYARIFFRNSVATGEIYPLESEARLCEECSTGDVVTIEMAERRLINHTTGKEYKVKPIGD-LGPVIDAGGIFAYARK 271
            +A+ A+G  AV+A+SYARIFFRN+   G   P+     L +E + GD V I+M   ++IN T GK+Y  KPI   +  +I AGG+  + +K
Sbjct:   72 IAIKASGIRAVIAKSYARIFFRNAFNIG--LPIFEVPELIDETNEGDEVEIDMNSGQIINLTKGKKYNTKPIPPFMQELIKAGGLVEWTKK 160
The following BLAST results are available for this feature:
BLAST of EY711231 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
LEUD_THEYD7.353e-1141.763-isopropylmalate dehydratase small subunit OS=The... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C3-702-005-D03-CT.F Sweet orange fruit, development stadium (3 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY711231 ID=EY711231; Name=EY711231; organism=Citrus sinensis; type=EST; length=568bp
GGTGGCGCTGGGAGCGGCGGGCTGTTCGGCGGTGGTTGCAGAGAGTTACG
CGAGGATATTCTTTAGGAATTCAGTTGCGACGGGGGAAATATATCCGTTG
GAGTCGGAGGCAAGGCTTTGTGAGGAGTGCAGTACGGGAGATGTGGTAAC
TATTGAAATGGCTGAGAGGCGTTTGATCAATCACACTACTGGGAAGGAGT
ATAAAGTGAAGCCCATTGGTGATTTGGGGCCCGTTATTGATGCTGGTGGT
ATCTTCGCCTACGCGCGAAAGACCGGAAATGATGCCAGCCGCAACTGAGA
TAGCTCTCATAGCTTCTTTTGCAGGNTGTGCCTGCAGCATCATATGCNAG
TTCATACACTATTGGNTAGTTAGAATAGAACTCTGCTTTTCATATGCTCG
GCCTTTGAGGACTAGNTCTGNTGCCCTTGTATCAGAAGATTAAGTTTCTC
TGCTGGAGTGCTGAATCGTCGACCACTGGCTTNATAAAATGTTCCATGCC
TTCCCTGGGGAAGTTTGACCACCGGGGTGGGGTAAATTTGGTGAATGGGA
TTTTGACTTGGGGTTCAT
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