EY711178
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of EY711178 vs. ExPASy Swiss-Prot
Match: RS8_MAIZE (40S ribosomal protein S8 OS=Zea mays GN=RPS8 PE=2 SV=2) HSP 1 Score: 307.76 bits (787), Expect = 6.024e-83 Identity = 159/213 (74.65%), Postives = 164/213 (77.00%), Query Frame = 3 Query: 114 MGISRDSMHXXXXXXXXXXXXXXXXXYELGRQPANTKLSSNKTVRRIRVRGGNVKWRALRLDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGVDIGRXXXXXXXXXXXXXXXXXXXXXXXXXXSNHVVRKLEKRQKDRTLDPHIEEQFGAGRLLACISSRPGQCGRADGYILEX*ELGFYMKELQR 752 MGISRDSMH YELGRQPANTKLSSNKTVRR+RVRGGNVKWRALRLDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYL HYGVDIGR SNHV RKLEKR++ RTLDPHIEEQFG+GRLLACISSRPGQCGRADGYILE EL FYMK+LQR Sbjct: 1 MGISRDSMHKRRATGGKQKAWRKKRKYELGRQPANTKLSSNKTVRRVRVRGGNVKWRALRLDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLTHYGVDIGRKKKTPAAKKDNAEGQEVEAAAEETKKSNHVTRKLEKRKEGRTLDPHIEEQFGSGRLLACISSRPGQCGRADGYILEGKELEFYMKKLQR 213
BLAST of EY711178 vs. ExPASy Swiss-Prot
Match: RS8_ORYSJ (40S ribosomal protein S8 OS=Oryza sativa subsp. japonica GN=RPS8 PE=2 SV=2) HSP 1 Score: 303.523 bits (776), Expect = 1.136e-81 Identity = 160/213 (75.12%), Postives = 164/213 (77.00%), Query Frame = 3 Query: 114 MGISRDSMHXXXXXXXXXXXXXXXXXYELGRQPANTKLSSNKTVRRIRVRGGNVKWRALRLDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGVDIGRXXXXXXXXXXXXXXXXXXXXXXXXXXSNHVVRKLEKRQKDRTLDPHIEEQFGAGRLLACISSRPGQCGRADGYILEX*ELGFYMKELQR 752 MGISRDSMH YELGRQPANTKLSSNKTVRR+RVRGGNVKWRALRLDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYL HYGVDIGR SNHVVRKLEKRQ+ RTLD HIEEQFG+GRLLACISSRPGQCGRADGYILE EL FYMK+LQR Sbjct: 1 MGISRDSMHKRRATGGKQKAWRKKRKYELGRQPANTKLSSNKTVRRVRVRGGNVKWRALRLDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLTHYGVDIGR-KKKAPAAKKDAEGQDAEATTEEAKKSNHVVRKLEKRQQGRTLDAHIEEQFGSGRLLACISSRPGQCGRADGYILEGKELEFYMKKLQR 212
BLAST of EY711178 vs. ExPASy Swiss-Prot
Match: RS8_PRUAR (40S ribosomal protein S8 OS=Prunus armeniaca GN=RPS8 PE=2 SV=1) HSP 1 Score: 291.197 bits (744), Expect = 5.835e-78 Identity = 154/213 (72.30%), Postives = 161/213 (75.59%), Query Frame = 3 Query: 114 MGISRDSMHXXXXXXXXXXXXXXXXXYELGRQPANTKLSSNKTVRRIRVRGGNVKWRALRLDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGVDIGRXXXXXXXXXXXXXXXXXXXXXXXXXXSNHVVRKLEKRQKDRTLDPHIEEQFGAGRLLACISSRPGQCGRADGYILEX*ELGFYMKELQR 752 MGISRDSMH YELGRQPANTKLSSNKTVRRIRVRGGNVKWRALRLDTGN+SWGSEAVTRKTR+LDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV+IGR SNHV KLEKRQ+ RTLD HIEEQFG G+LLACISSRPGQCG+ADG ILE EL FYMK+LQR Sbjct: 1 MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKLSSNKTVRRIRVRGGNVKWRALRLDTGNFSWGSEAVTRKTRLLDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGVEIGR--KKKTAAAKKDTPEEGEATTEEAKKSNHVAIKLEKRQQGRTLDAHIEEQFGGGKLLACISSRPGQCGKADGDILEGKELEFYMKKLQR 211
BLAST of EY711178 vs. ExPASy Swiss-Prot
Match: RS82_ARATH (40S ribosomal protein S8-2 OS=Arabidopsis thaliana GN=RPS8B PE=2 SV=1) HSP 1 Score: 284.648 bits (727), Expect = 5.461e-76 Identity = 151/213 (70.89%), Postives = 159/213 (74.65%), Query Frame = 3 Query: 114 MGISRDSMHXXXXXXXXXXXXXXXXXYELGRQPANTKLSSNKTVRRIRVRGGNVKWRALRLDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGVDIGRXXXXXXXXXXXXXXXXXXXXXXXXXXSNHVVRKLEKRQKDRTLDPHIEEQFGAGRLLACISSRPGQCGRADGYILEX*ELGFYMKELQR 752 MGISRDS+H YELGRQPANTKLSSNKTVRRIRVRGGNVKWRALRLDTGN+SWGSEAVTRKTRILDV YNASNNELVRTQTLVKSAIVQVDAAPFKQ YLQHYGVDIGR SNHV RKLE RQ+ R LD H+EEQF +GRLLACI+SRPGQCGRADGYILE EL FYMK+LQ+ Sbjct: 1 MGISRDSIHKRRATGGKQKMWRKKRKYELGRQPANTKLSSNKTVRRIRVRGGNVKWRALRLDTGNFSWGSEAVTRKTRILDVAYNASNNELVRTQTLVKSAIVQVDAAPFKQGYLQHYGVDIGR------------KKKGEAVTTEEVKKSNHVQRKLEMRQEGRALDSHLEEQFSSGRLLACIASRPGQCGRADGYILEGKELEFYMKKLQK 201
BLAST of EY711178 vs. ExPASy Swiss-Prot
Match: RS81_ARATH (40S ribosomal protein S8-1 OS=Arabidopsis thaliana GN=RPS8A PE=2 SV=1) HSP 1 Score: 281.182 bits (718), Expect = 6.038e-75 Identity = 144/215 (66.98%), Postives = 160/215 (74.42%), Query Frame = 3 Query: 114 MGISRDSMHXXXXXXXXXXXXXXXXXYELGRQPANTKLSSNKTVRRIRVRGGNVKWRALRLDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGVDIGRXXXXXXXXXXXXXXXXXXXXXXXXXX--SNHVVRKLEKRQKDRTLDPHIEEQFGAGRLLACISSRPGQCGRADGYILEX*ELGFYMKELQR 752 MGISRDS+H YE+GRQPANTKLSSNKTVRRIRVRGGNVKWRALRLDTGNYSWGSEA TRKTR+LDVVYNASNNELVRT+TLVKSAIVQVDAAPFKQWYL HYGV++GR SNH++RK+ RQ+ R+LD HIE+QF +GRLLACISSRPGQCGRADGYILE EL FYMK++Q+ Sbjct: 1 MGISRDSIHKRRATGGKQKQWRKKRKYEMGRQPANTKLSSNKTVRRIRVRGGNVKWRALRLDTGNYSWGSEATTRKTRVLDVVYNASNNELVRTKTLVKSAIVQVDAAPFKQWYLSHYGVELGRKKKSASSTKKDGEEGEEAAVAAPEEVKKSNHLLRKIASRQEGRSLDSHIEDQFASGRLLACISSRPGQCGRADGYILEGKELEFYMKKIQK 215
BLAST of EY711178 vs. ExPASy Swiss-Prot
Match: RS8_ICTPU (40S ribosomal protein S8 OS=Ictalurus punctatus GN=rps8 PE=2 SV=3) HSP 1 Score: 212.616 bits (540), Expect = 2.637e-54 Identity = 109/212 (51.42%), Postives = 138/212 (65.09%), Query Frame = 3 Query: 114 MGISRDSMHXXXXXXXXXXXXXXXXXYELGRQPANTKLSSNKTVRRIRVRGGNVKWRALRLDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGVDIGRXXXXXXXXXXXXXXXXXXXXXXXXXXSNHVVRKLEKRQKDRTLDPHIEEQFGAGRLLACISSRPGQCGRADGYILEX*ELGFYMKELQ 749 MGISRD+ H YELGR P+NTKL K + +RVRGGN K+RALRLD GN+SWGSE TRKTRI+DVVYNASNNELVRT+TLVK+ ++ VD+APF+QWY HY + +GR S V +K +KR+K+ + P ++EQF G+LLACISSRPGQCGRADGY+LE EL FY+++++ Sbjct: 1 MGISRDNWHKRRKTGGKRKPVHKKRKYELGRPPSNTKLGP-KRIHTVRVRGGNKKYRALRLDVGNFSWGSECCTRKTRIIDVVYNASNNELVRTKTLVKNCVILVDSAPFRQWYESHYALPLGR--------KKGAKLTPEEEDILNKKRSKKVQKKFDKRRKNSKISPLLDEQFQQGKLLACISSRPGQCGRADGYVLEGKELEFYLRKIK 203
BLAST of EY711178 vs. ExPASy Swiss-Prot
Match: RS8_APIME (40S ribosomal protein S8 OS=Apis mellifera GN=RpS8 PE=2 SV=2) HSP 1 Score: 203.756 bits (517), Expect = 1.225e-51 Identity = 109/212 (51.42%), Postives = 131/212 (61.79%), Query Frame = 3 Query: 114 MGISRDSMHXXXXXXXXXXXXXXXXXYELGRQPANTKLSSNKTVRRIRVRGGNVKWRALRLDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGVDIGRXXXXXXXXXXXXXXXXXXXXXXXXXXSNHVVRKLEKRQKDRTLDPHIEEQFGAGRLLACISSRPGQCGRADGYILEX*ELGFYMKELQ 749 MGISRD H +ELGR ANTKL + + +R RGGN K+RALRLDTGN+SWGSE TRKTRI+DVVYNASNNELVRT+TLVK+AIV +DA PF+QWY HY + +GR S K + RQ+ ++P +EEQF GR+LACISSRPGQCGR DGYILE EL FYM+ ++ Sbjct: 1 MGISRDHWHKRRATGGKRKPIRKKRKFELGRPAANTKLGPQR-IHTVRTRGGNKKYRALRLDTGNFSWGSECTTRKTRIIDVVYNASNNELVRTKTLVKNAIVTIDATPFRQWYEGHYVLPLGR--------KRGAKLTEAEEEVLNKKRSKKAEAKYKARQRFAKVEPALEEQFATGRVLACISSRPGQCGREDGYILEGKELEFYMRRIK 203
BLAST of EY711178 vs. ExPASy Swiss-Prot
Match: RS8_DANRE (40S ribosomal protein S8 OS=Danio rerio GN=rps8 PE=2 SV=2) HSP 1 Score: 202.986 bits (515), Expect = 2.090e-51 Identity = 107/212 (50.47%), Postives = 133/212 (62.74%), Query Frame = 3 Query: 114 MGISRDSMHXXXXXXXXXXXXXXXXXYELGRQPANTKLSSNKTVRRIRVRGGNVKWRALRLDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGVDIGRXXXXXXXXXXXXXXXXXXXXXXXXXXSNHVVRKLEKRQKDRTLDPHIEEQFGAGRLLACISSRPGQCGRADGYILEX*ELGFYMKELQ 749 MGISRD+ H YELGR ANTK+ + + IRVRGGN K+RALRLD GN+SWGSE TRKTRI+DVVYNASNNELVRT+TLVK+ +V VD+ P++QWY HY + +GR S V +K R+K + P +EEQF G+LLACISSRPGQCGRADGY+LE EL FY+++++ Sbjct: 1 MGISRDNWHKRRRTGGKRKPVHKKRKYELGRPAANTKIGPRR-IHTIRVRGGNKKYRALRLDVGNFSWGSECCTRKTRIIDVVYNASNNELVRTKTLVKNCVVLVDSTPYRQWYESHYALPLGR--------KKGAKLTPEEEEILNKKRSKKVQKKFTLRRKTAKISPLLEEQFLQGKLLACISSRPGQCGRADGYVLEGKELEFYLRKIK 203
BLAST of EY711178 vs. ExPASy Swiss-Prot
Match: RS8_RAT (40S ribosomal protein S8 OS=Rattus norvegicus GN=Rps8 PE=1 SV=2) HSP 1 Score: 201.445 bits (511), Expect = 6.080e-51 Identity = 103/212 (48.58%), Postives = 135/212 (63.68%), Query Frame = 3 Query: 114 MGISRDSMHXXXXXXXXXXXXXXXXXYELGRQPANTKLSSNKTVRRIRVRGGNVKWRALRLDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGVDIGRXXXXXXXXXXXXXXXXXXXXXXXXXXSNHVVRKLEKRQKDRTLDPHIEEQFGAGRLLACISSRPGQCGRADGYILEX*ELGFYMKELQ 749 MGISRD+ H YELGR ANTK+ + + +RVRGGN K+RALRLD GN+SWGSE TRKTRI+DVVYNASNNELVRT+TLVK+ IV +D+ P++QWY HY + +GR S + +K ++R+K+ + +EEQF G+LLACI+SRPGQCGRADGY+LE EL FY+++++ Sbjct: 1 MGISRDNWHKRRKTGGKRKPYHKKRKYELGRPAANTKIGPRR-IHTVRVRGGNKKYRALRLDVGNFSWGSECCTRKTRIIDVVYNASNNELVRTKTLVKNCIVLIDSTPYRQWYESHYALPLGR--------KKGAKLTPEEEEILNKKRSKKIQKKYDERKKNAKISSLLEEQFQQGKLLACIASRPGQCGRADGYVLEGKELEFYLRKIK 203
BLAST of EY711178 vs. ExPASy Swiss-Prot
Match: RS8_MOUSE (40S ribosomal protein S8 OS=Mus musculus GN=Rps8 PE=1 SV=2) HSP 1 Score: 201.445 bits (511), Expect = 6.080e-51 Identity = 103/212 (48.58%), Postives = 135/212 (63.68%), Query Frame = 3 Query: 114 MGISRDSMHXXXXXXXXXXXXXXXXXYELGRQPANTKLSSNKTVRRIRVRGGNVKWRALRLDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGVDIGRXXXXXXXXXXXXXXXXXXXXXXXXXXSNHVVRKLEKRQKDRTLDPHIEEQFGAGRLLACISSRPGQCGRADGYILEX*ELGFYMKELQ 749 MGISRD+ H YELGR ANTK+ + + +RVRGGN K+RALRLD GN+SWGSE TRKTRI+DVVYNASNNELVRT+TLVK+ IV +D+ P++QWY HY + +GR S + +K ++R+K+ + +EEQF G+LLACI+SRPGQCGRADGY+LE EL FY+++++ Sbjct: 1 MGISRDNWHKRRKTGGKRKPYHKKRKYELGRPAANTKIGPRR-IHTVRVRGGNKKYRALRLDVGNFSWGSECCTRKTRIIDVVYNASNNELVRTKTLVKNCIVLIDSTPYRQWYESHYALPLGR--------KKGAKLTPEEEEILNKKRSKKIQKKYDERKKNAKISSLLEEQFQQGKLLACIASRPGQCGRADGYVLEGKELEFYLRKIK 203 The following BLAST results are available for this feature:
BLAST of EY711178 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 25
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Sequences
The
following sequences are available for this feature:
EST sequence >EY711178 ID=EY711178; Name=EY711178; organism=Citrus sinensis; type=EST; length=947bpback to top |