EY711154

Overview
NameEY711154
Unique NameEY711154
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length933
Libraries
Library NameType
Sweet orange fruit, development stadium (3 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY711154 vs. ExPASy Swiss-Prot
Match: HAT5_ARATH (Homeobox-leucine zipper protein HAT5 OS=Arabidopsis thaliana GN=HAT5 PE=1 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 1.470e-25
Identity = 65/160 (40.62%), Postives = 98/160 (61.25%), Query Frame = 3
Query:   18 PRKEIHLAKDLGLQPRQVAIWFQNRRARWKTKQLEKDYDVLQNSYNSLKADYDNLFKEKEKLKAEVLTLTDKLQVKEKEGKNTELPVVNKTLSQEPPQISEPVADSAASEGEVCKASVVACKQED---ISSAKSDIFDSDSPNYTDGVHSSLLETCDSSY 488
            P ++  LAK LGLQPRQVA+WFQNRRARWKTKQLE+DYD+L+++Y+ L ++YD++  + +KL++EV +LT+KLQ K+            +T ++ P Q+ EP      ++ +    +  A K ED     S  S + D D+P         LL++CDS +
Sbjct:   92 PERKTQLAKKLGLQPRQVAVWFQNRRARWKTKQLERDYDLLKSTYDQLLSNYDSIVMDNDKLRSEVTSLTEKLQGKQ------------ETANEPPGQVPEP------NQLDPVYINAAAIKTEDRLSSGSVGSAVLDDDAP--------QLLDSCDSYF 225          
BLAST of EY711154 vs. ExPASy Swiss-Prot
Match: HOX16_ORYSJ (Homeobox-leucine zipper protein HOX16 OS=Oryza sativa subsp. japonica GN=HOX16 PE=2 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 4.426e-22
Identity = 58/146 (39.73%), Postives = 89/146 (60.96%), Query Frame = 3
Query:   18 PRKEIHLAKDLGLQPRQVAIWFQNRRARWKTKQLEKDYDVLQNSYNSLKADYDNLFKEKEKLKAEVLTLTDKLQVKE-----KEGKNTELPVVNKT--LSQEPPQISEPVADSAASEGEVCKASVVACKQE-DISSAKSDIFDSDS 431
            P ++  LA+ LGLQPRQVA+WFQNRRARWKTKQLE+D+D L+ S+++L+AD+D L ++  +L ++V++LT+KLQ KE       G   ++P +     +    P   EP  + AA+  E  +   V  +      S  S + D+D+
Sbjct:  101 PERKTELARKLGLQPRQVAVWFQNRRARWKTKQLERDFDRLKASFDALRADHDALLQDNHRLHSQVMSLTEKLQEKETTTEGSAGAAVDVPGLPAAADVKVAVPDAEEPALEEAAAAFEEQQEQQVKAEDRLSTGSGGSAVVDTDA 246          
BLAST of EY711154 vs. ExPASy Swiss-Prot
Match: HOX16_ORYSI (Homeobox-leucine zipper protein HOX16 OS=Oryza sativa subsp. indica GN=HOX16 PE=2 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 4.426e-22
Identity = 58/146 (39.73%), Postives = 89/146 (60.96%), Query Frame = 3
Query:   18 PRKEIHLAKDLGLQPRQVAIWFQNRRARWKTKQLEKDYDVLQNSYNSLKADYDNLFKEKEKLKAEVLTLTDKLQVKE-----KEGKNTELPVVNKT--LSQEPPQISEPVADSAASEGEVCKASVVACKQE-DISSAKSDIFDSDS 431
            P ++  LA+ LGLQPRQVA+WFQNRRARWKTKQLE+D+D L+ S+++L+AD+D L ++  +L ++V++LT+KLQ KE       G   ++P +     +    P   EP  + AA+  E  +   V  +      S  S + D+D+
Sbjct:  103 PERKTELARKLGLQPRQVAVWFQNRRARWKTKQLERDFDRLKASFDALRADHDALLQDNHRLHSQVMSLTEKLQEKETTTEGSAGAAVDVPGLPAAADVKVAVPDAEEPALEEAAAAFEEQQEQQVKAEDRLSTGSGGSAVVDTDA 248          
BLAST of EY711154 vs. ExPASy Swiss-Prot
Match: HOX4_ORYSJ (Homeobox-leucine zipper protein HOX4 OS=Oryza sativa subsp. japonica GN=HOX4 PE=1 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 1.424e-20
Identity = 53/109 (48.62%), Postives = 71/109 (65.14%), Query Frame = 3
Query:   18 PRKEIHLAKDLGLQPRQVAIWFQNRRARWKTKQLEKDYDVLQNSYNSLKADYDNLFKEKEKLKAEVLTLTDKLQVKEKEGKNTELPVVNKTLSQEPPQISEPVADSAAS 344
            P ++  LA+DLGLQPRQVA+WFQNRRARWKTKQLE+DY  L++SY+SL+ D+D L ++K+ L AE+  L  KL  +E     T +       S  PP      +DS +S
Sbjct:   75 PERKARLARDLGLQPRQVAVWFQNRRARWKTKQLERDYAALRHSYDSLRLDHDALRRDKDALLAEIKELKAKLGDEEAAASFTSVK-EEPAASDGPPAAGFGSSDSDSS 182          
BLAST of EY711154 vs. ExPASy Swiss-Prot
Match: HOX4_ORYSI (Homeobox-leucine zipper protein HOX4 OS=Oryza sativa subsp. indica GN=HOX4 PE=1 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 1.424e-20
Identity = 53/109 (48.62%), Postives = 71/109 (65.14%), Query Frame = 3
Query:   18 PRKEIHLAKDLGLQPRQVAIWFQNRRARWKTKQLEKDYDVLQNSYNSLKADYDNLFKEKEKLKAEVLTLTDKLQVKEKEGKNTELPVVNKTLSQEPPQISEPVADSAAS 344
            P ++  LA+DLGLQPRQVA+WFQNRRARWKTKQLE+DY  L++SY+SL+ D+D L ++K+ L AE+  L  KL  +E     T +       S  PP      +DS +S
Sbjct:   75 PERKARLARDLGLQPRQVAVWFQNRRARWKTKQLERDYAALRHSYDSLRLDHDALRRDKDALLAEIKELKAKLGDEEAAASFTSVK-EEPAASDGPPAAGFGSSDSDSS 182          
BLAST of EY711154 vs. ExPASy Swiss-Prot
Match: HOX20_ORYSJ (Homeobox-leucine zipper protein HOX20 OS=Oryza sativa subsp. japonica GN=HOX20 PE=2 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.860e-20
Identity = 53/118 (44.92%), Postives = 72/118 (61.02%), Query Frame = 3
Query:   18 PRKEIHLAKDLGLQPRQVAIWFQNRRARWKTKQLEKDYDVLQNSYNSLKADYDNLFKEKEKLKAEVLTLTDKLQVKEKEG-----KNTELPVVNKTLSQEPPQISEPVADSAASEGEV 356
            P ++  LA+DLGLQPRQVA+WFQNRRARWKTKQLE+DY  L+ SY++L+AD+D L ++K+ L AE+  L  KL  ++        K  E P  +     +PP    P   S +    V
Sbjct:   67 PERKARLARDLGLQPRQVAVWFQNRRARWKTKQLERDYAALRQSYDALRADHDALRRDKDALLAEIKELKGKLGDEDAAASFSSVKEEEDPAAS---DADPPATGAPQGSSESDSSAV 181          
BLAST of EY711154 vs. ExPASy Swiss-Prot
Match: HOX20_ORYSI (Homeobox-leucine zipper protein HOX20 OS=Oryza sativa subsp. indica GN=HOX20 PE=2 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.860e-20
Identity = 53/118 (44.92%), Postives = 72/118 (61.02%), Query Frame = 3
Query:   18 PRKEIHLAKDLGLQPRQVAIWFQNRRARWKTKQLEKDYDVLQNSYNSLKADYDNLFKEKEKLKAEVLTLTDKLQVKEKEG-----KNTELPVVNKTLSQEPPQISEPVADSAASEGEV 356
            P ++  LA+DLGLQPRQVA+WFQNRRARWKTKQLE+DY  L+ SY++L+AD+D L ++K+ L AE+  L  KL  ++        K  E P  +     +PP    P   S +    V
Sbjct:   67 PERKARLARDLGLQPRQVAVWFQNRRARWKTKQLERDYAALRQSYDALRADHDALRRDKDALLAEIKELKGKLGDEDAAASFSSVKEEEDPAAS---DADPPATGAPQGSSESDSSAV 181          
BLAST of EY711154 vs. ExPASy Swiss-Prot
Match: ATHB6_ARATH (Homeobox-leucine zipper protein ATHB-6 OS=Arabidopsis thaliana GN=ATHB-6 PE=1 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.860e-20
Identity = 49/105 (46.67%), Postives = 71/105 (67.62%), Query Frame = 3
Query:   18 PRKEIHLAKDLGLQPRQVAIWFQNRRARWKTKQLEKDYDVLQNSYNSLKADYDNLFKEKEKLKAEVLTLTDKLQ---VKEKEGKNTELPVVNKTLSQEPPQISEP 323
            P +++ LA++LGLQPRQVA+WFQNRRARWKTKQLEKDY VL+  Y+SL+ ++D+L ++ E L  E+  L  KL     +E+E +N         +S +  ++S P
Sbjct:   86 PERKVKLAQELGLQPRQVAVWFQNRRARWKTKQLEKDYGVLKTQYDSLRHNFDSLRRDNESLLQEISKLKTKLNGGGGEEEEEENNAAVTTESDISVKEEEVSLP 190          
BLAST of EY711154 vs. ExPASy Swiss-Prot
Match: ATB12_ARATH (Homeobox-leucine zipper protein ATHB-12 OS=Arabidopsis thaliana GN=ATHB-12 PE=2 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 3.172e-20
Identity = 62/162 (38.27%), Postives = 99/162 (61.11%), Query Frame = 3
Query:   18 PRKEIHLAKDLGLQPRQVAIWFQNRRARWKTKQLEKDYDVLQNSYNSLKADYDNLFKEKEKLKAEVLTLTDKLQVKEKEGKNTE------LPVVNKTLSQEPPQISEPVADSAASEGEVCKASVVACKQEDISSAKSDIFDSDSPNYTDGVHSSLLETCDSS 485
            PRK++ +A++LGLQPRQVAIWFQN+RARWKTKQLEK+Y+ L+ +YN+L + ++ + KEK+ L +E+  L +++Q + KE K+ E      L + + T S      SEP       EG + + SV+    +  ++ K++ F  +    TD    +++E  D S
Sbjct:   54 PRKKVQVARELGLQPRQVAIWFQNKRARWKTKQLEKEYNTLRANYNNLASQFEIMKKEKQSLVSELQRLNEEMQ-RPKEEKHHECCGDQGLALSSSTESHNGK--SEP-------EGRLDQGSVLCNDGDYNNNIKTEYFGFEEE--TDHELMNIVEKADDS 203          
BLAST of EY711154 vs. ExPASy Swiss-Prot
Match: HOX5_ORYSJ (Homeobox-leucine zipper protein HOX5 OS=Oryza sativa subsp. japonica GN=HOX5 PE=1 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 5.410e-20
Identity = 61/172 (35.47%), Postives = 98/172 (56.98%), Query Frame = 3
Query:   18 PRKEIHLAKDLGLQPRQVAIWFQNRRARWKTKQLEKDYDVLQNSYNSLKADYDNLFKEKEKLKAEVLTLTDKLQVKEKEGKNTELPVVNKTLSQEPPQISEPVADSAASEGEVCKASVVAC---------KQEDISSAKSDIFDSDSP------NYTDGVHSSLLETCDSSY 488
            P ++  LA+ LG+ PRQVA+WFQNRRARWKTKQLE D+D L+ +Y++L AD+  L  + ++L+A+V++LT+KLQ KE    +  +     T +QE  Q  E   ++A++ G       +A           ++D+ S+     D D        + T+G +  L  +C+S+Y
Sbjct:  110 PERKTELARRLGMAPRQVAVWFQNRRARWKTKQLEHDFDRLKAAYDALAADHHALLSDNDRLRAQVISLTEKLQDKETSPSSATI----TTAAQEVDQPDEH-TEAASTTGFATVDGALAAPPPGHQQPPHKDDLVSSGGTNDDGDGGAAVVVFDVTEGANDRL--SCESAY 274          
The following BLAST results are available for this feature:
BLAST of EY711154 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 40
Match NameE-valueIdentityDescription
HAT5_ARATH1.470e-2540.63Homeobox-leucine zipper protein HAT5 OS=Arabidopsi... [more]
HOX16_ORYSJ4.426e-2239.73Homeobox-leucine zipper protein HOX16 OS=Oryza sat... [more]
HOX16_ORYSI4.426e-2239.73Homeobox-leucine zipper protein HOX16 OS=Oryza sat... [more]
HOX4_ORYSJ1.424e-2048.62Homeobox-leucine zipper protein HOX4 OS=Oryza sati... [more]
HOX4_ORYSI1.424e-2048.62Homeobox-leucine zipper protein HOX4 OS=Oryza sati... [more]
HOX20_ORYSJ1.860e-2044.92Homeobox-leucine zipper protein HOX20 OS=Oryza sat... [more]
HOX20_ORYSI1.860e-2044.92Homeobox-leucine zipper protein HOX20 OS=Oryza sat... [more]
ATHB6_ARATH1.860e-2046.67Homeobox-leucine zipper protein ATHB-6 OS=Arabidop... [more]
ATB12_ARATH3.172e-2038.27Homeobox-leucine zipper protein ATHB-12 OS=Arabido... [more]
HOX5_ORYSJ5.410e-2035.47Homeobox-leucine zipper protein HOX5 OS=Oryza sati... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-702-004-D10-CT.F Sweet orange fruit, development stadium (3 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY711154 ID=EY711154; Name=EY711154; organism=Citrus sinensis; type=EST; length=933bp
TTGCCCGACCCACGCGTCCGCGAAAGGAAATTCACCTGGCAAAAGACCTT
GGCTTGCAGCCTAGACAGGTTGCGATTTGGTTCCAAAACCGCCGGGCTCG
TTGGAAGACTAAACAGCTCGAGAAGGATTACGATGTATTGCAAAACAGCT
ATAATAGCCTTAAGGCCGATTATGACAATCTCTTCAAGGAGAAAGAAAAG
CTAAAAGCTGAGGTTCTTACGCTCACAGACAAGCTGCAGGTCAAAGAGAA
AGAGGGTAAAAACACAGAATTGCCTGTAGTAAACAAGACATTGTCACAAG
AACCACCACAAATTTCAGAACCTGTTGCTGATTCTGCTGCCTCAGAGGGT
GAAGTATGCAAAGCCTCAGTTGTGGCTTGTAAGCAAGAAGATATAAGTTC
AGCCAAAAGTGATATATTTGATTCGGATAGCCCAAATTACACGGATGGGG
TTCACTCTTCACTCCTAGAAACTTGTGATTCATCTTATGTGTTTGAACCT
GAACAGTCCGATTTATCACAAGATGAAGATGATAGCTTGAGCAAGAATGT
CCTGTTGCCTCCATACGTCTTCCCAAAGCTTGAAGAAACTGAATACTCGG
AACCGCCCACGAATTCCTGTAACTTCGGATTCCCCCATTGAAGATCACGC
CTTTTGGTCATGGGCCTTCTGATCATGAAATCCTGGGATATAAGTTTATA
CTGCCTGGGGCCTTCCTTGGTTTTTTAAAAAGCATGTAAAATTGTAAGTT
AGGAAATAGAAATAATTCCATCAATGGCACCTTATGCAAAATGGGGGGTG
ATTTTGATTGCTGTTGAAAACAAAAAGGTGGGTTTCGCCCGCCTGAATTT
CTGTTCTTGGAGGAGTTCCTGAGGGGGGAAAGCACTTCTGGTTCAAAGGG
AACTAAAAAAACCTTTATTTGAAAAAGAACTTT
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