EY686995

Overview
NameEY686995
Unique NameEY686995
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length840
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EY686995 vs. ExPASy Swiss-Prot
Match: CDI8_ARATH (Cadmium-induced protein AS8 OS=Arabidopsis thaliana GN=At4g19070 PE=2 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 2.986e-27
Identity = 58/131 (44.27%), Postives = 78/131 (59.54%), Query Frame = 1 
Query:   13 RRYQRWNPVHPTSGAXXXXXXXXXXXXXXXXXXXXDVIGYVGAGCGVGFSVGITFAGFGIGFPANFLLQLPYRAIKATRSGELEIALSNARSFAGDGWNNIAPRVSGFQREATERFSSFKQKQFLDKGVSL 405
            RRY++WNPVHPT GA                    +VIGYVGAGCGVGFSVGIT AG GIG P NFLL  PY  ++ATR G         ++ + +GW+++ P+++G QR+ +E  S F +K  L+  + L
Sbjct:   11 RRYEKWNPVHPTYGAFWGMGIGIGCGVGWGPGFGPEVIGYVGAGCGVGFSVGITLAGLGIGLPTNFLLAAPYNTVEATRKGAFNFF---GKNLSTNGWSDLMPQIAGLQRQVSEICSGFNKKPHLNNAIDL 138
The following BLAST results are available for this feature:
BLAST of EY686995 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
CDI8_ARATH2.986e-2744.27Cadmium-induced protein AS8 OS=Arabidopsis thalian... [more]
back to top
Properties
Property NameValue
Genbank descriptionCS00-C2-003-031-G06-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY686995 ID=EY686995; Name=EY686995; organism=Citrus sinensis; type=EST; length=840bp
CCACGCGTCCGCAGGAGATACCAGAGATGGAATCCAGTGCATCCGACCTC
AGGTGCATTCTGGGGAATGGGTGTTGGGATCGGTTGTGGTGTTGGTTGGG
GTCCTGGTTTCGGCCCTGATGTTATTGGCTATGTGGGTGCTGGCTGTGGT
GTTGGTTTCAGTGTTGGCATCACTTTTGCTGGTTTTGGCATTGGCTTTCC
TGCTAATTTCCTCTTGCAACTTCCTTACAGAGCAATTAAAGCTACAAGAA
GTGGTGAATTGGAGATTGCGCTGTCAAATGCTAGAAGTTTTGCTGGTGAT
GGCTGGAATAATATTGCACCTCGTGTTTCTGGCTTCCAAAGAGAAGCAAC
TGAAAGATTCTCTAGCTTCAAGCAAAAACAATTCTTGGATAAAGGGGTTT
CTTTATGCAACGATGTGAAGAGTATGATGCCTGTGAAGTCTATTCCGAAA
CGTTTACGGAGATTTAGGCCACCCTTTCCTCCACCCTGACAAAGATTTGA
AGGATTAACGCCATGCAGTAGCCTCCGGAGCTGGCGCTATACGCGTTCTT
TGACATTTGCAAAAACTCCCGCCCCCTCCCTCCTTAATCTTGAGCTGGAT
ATCCCGACTTAGGGTAGTCCGCTCTCCCGGAACTTTCCTCCCCACCGCAC
CAGACGCACCGCCCCCGCGCCCCGCCCCCAGCGACCACGCTCATGTCTAG
AAAAGCGTGCTGCGCCCCAAACACTCCCCAAGGGCCGCCGTGGGACAAAT
TCCCTGGGCGCCCCGGGCCCCGCGCCCTATCCACGCGCGAGCACCCGTCG
GTGGGCGTGGGCGGCGCGCCGTAAAACCCCAACCCGACCT
back to top