EY711135

Overview
NameEY711135
Unique NameEY711135
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length729
Libraries
Library NameType
Sweet orange fruit, development stadium (3 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig10509 contig Csv1_Contig10509:1..729. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of EY711135 vs. ExPASy Swiss-Prot
Match: TM9S3_MOUSE (Transmembrane 9 superfamily member 3 OS=Mus musculus GN=Tm9sf3 PE=1 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 2.523e-13
Identity = 32/53 (60.38%), Postives = 41/53 (77.36%), Query Frame = 2 
Query:   53 YYVIPKMSGFFQTSFYFGYTLMFSLGLGILCGAVGYLGSNLFVRRIYRNIKCD 211
            Y+   KM G FQTSFYFGY  +FS  LGI+CGA+GY+G++ FVR+IY N+K D
Sbjct:  535 YFFKTKMYGLFQTSFYFGYMAVFSTALGIMCGAIGYMGTSAFVRKIYTNVKID 587
[Close]
BLAST of EY711135 vs. ExPASy Swiss-Prot
Match: TM9S3_HUMAN (Transmembrane 9 superfamily member 3 OS=Homo sapiens GN=TM9SF3 PE=1 SV=2)

HSP 1 Score: 75.8702 bits (185), Expect = 2.523e-13
Identity = 32/53 (60.38%), Postives = 41/53 (77.36%), Query Frame = 2 
Query:   53 YYVIPKMSGFFQTSFYFGYTLMFSLGLGILCGAVGYLGSNLFVRRIYRNIKCD 211
            Y+   KM G FQTSFYFGY  +FS  LGI+CGA+GY+G++ FVR+IY N+K D
Sbjct:  537 YFFKTKMYGLFQTSFYFGYMAVFSTALGIMCGAIGYMGTSAFVRKIYTNVKID 589
The following BLAST results are available for this feature:
BLAST of EY711135 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
TM9S3_MOUSE2.523e-1360.38Transmembrane 9 superfamily member 3 OS=Mus muscul... [more]
TM9S3_HUMAN2.523e-1360.38Transmembrane 9 superfamily member 3 OS=Homo sapie... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C3-702-004-B11-CT.F Sweet orange fruit, development stadium (3 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY711135 ID=EY711135; Name=EY711135; organism=Citrus sinensis; type=EST; length=729bp
ACTTGTCACTCTTTGTCACTATTCCGGAATTCTTACTCGACCCACGCGTC
CGTACTATGTTATTCCTAAGATGTCAGGCTTCTTCCAGACTAGCTTCTAT
TTTGGCTACACTTTGATGTTTTCTCTTGGTTTAGGAATCCTCTGTGGAGC
TGTTGGTTATCTCGGCTCTAATTTGTTTGTGAGGAGGATTTATAGAAACA
TCAAGTGTGACTAGAACGTTACCAAGGAAAAACCGACCTGAGTGTGCTTA
CCTGAGAATTTTTGGCTGAGGCAATAAAATTTAGAGAGGAAGCCTTGGGT
CAGTATATGGGGGACCTTCCAGTATCTGCAGATGAAAATCACAGGGATAG
AGGATATTATGAGGAGCCCTGAAATTTTTCTAATATTTTCCCCGGCTGGG
AGTGAAAGCCTAAGCCTTAAGGTAGAAGTCAGAGATTGTTTTTATAATAT
GGGAAGCTTACATAATATTAGGAACAGCAATCTTTTTATTTTTATTTTTA
TCTTTATTTTTATTTTTTTCCCATTTTCTTCTTTCCCTTCACATATAGTT
GCCCCGTGTAAGGACCGGTGTCTAATTTCCCCTTGAATTTGTCTTGTTTG
CATATTTCTGGAGAATGAACTTATGAGGGGAAAGGACTCCAAGAAATGAA
TTTTGTGTTAAAAAATTATGGGGATACTGATTGTCTCCATGATTTCATCT
ATAATTTGCGTAAAAAAAAAAAAAAGGCC
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