EY711056

Overview
NameEY711056
Unique NameEY711056
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length706
Libraries
Library NameType
Sweet orange fruit, development stadium (3 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
EY711056_ssr627 microsatellite EY711056_ssr627:627..638. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig9507 contig Csv1_Contig9507:778..1484. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY711056 vs. ExPASy Swiss-Prot
Match: MO25N_ARATH (Putative MO25-like protein At5g47540 OS=Arabidopsis thaliana GN=At5g47540 PE=2 SV=1)

HSP 1 Score: 261.922 bits (668), Expect = 2.375e-69
Identity = 133/152 (87.50%), Postives = 144/152 (94.74%), Query Frame = 1
Query:   13 ATFMELLTRHKSTVAEFLSKNYNWFFAEYNSKLLESSNYITRRQAVKLLGDILLDRSNSVVMTRYVSSRENLRILMNLLRESSKSIQIEAFHVFKLFAANQNKPPDIVSILVANRSKLLRLFADFKTDKEDEQFEADKAQVVKEIAGLEPRD 468
            ATF ELLTRHKSTVAEFL+KN +WFFA+YNSKLLESSNYITRRQA+KLLGDILLDRSNS VMT+YVSSR+NLRILMNLLRESSKSIQIEAFHVFKLFAANQNKP DIV+ILVANRSKLLRL AD K DKEDE+FEADK+QV++EIA LEPRD
Sbjct:  190 ATFKELLTRHKSTVAEFLTKNEDWFFADYNSKLLESSNYITRRQAIKLLGDILLDRSNSAVMTKYVSSRDNLRILMNLLRESSKSIQIEAFHVFKLFAANQNKPADIVNILVANRSKLLRLLADLKPDKEDERFEADKSQVLREIAALEPRD 341          
BLAST of EY711056 vs. ExPASy Swiss-Prot
Match: MO25M_ARATH (Putative MO25-like protein At4g17270 OS=Arabidopsis thaliana GN=At4g17270 PE=2 SV=1)

HSP 1 Score: 246.128 bits (627), Expect = 1.349e-64
Identity = 125/152 (82.24%), Postives = 139/152 (91.45%), Query Frame = 1
Query:   13 ATFMELLTRHKSTVAEFLSKNYNWFFAEYNSKLLESSNYITRRQAVKLLGDILLDRSNSVVMTRYVSSRENLRILMNLLRESSKSIQIEAFHVFKLFAANQNKPPDIVSILVANRSKLLRLFADFKTDKEDEQFEADKAQVVKEIAGLEPRD 468
            ATF ELLTRHKSTVAEFL KN +WFFA+YNSKLLES+NYITRRQA+KLLGDILLDRSNS VMT+YVSS +NLRILMNLLRESSK+IQIEAFHVFKLF ANQNKP DI +ILVANR+KLLRL AD K DKEDE+F+ADKAQVV+EIA L+ R+
Sbjct:  190 ATFKELLTRHKSTVAEFLIKNEDWFFADYNSKLLESTNYITRRQAIKLLGDILLDRSNSAVMTKYVSSMDNLRILMNLLRESSKTIQIEAFHVFKLFVANQNKPSDIANILVANRNKLLRLLADIKPDKEDERFDADKAQVVREIANLKLRE 341          
BLAST of EY711056 vs. ExPASy Swiss-Prot
Match: MO25L_ARATH (MO25-like protein At2g03410 OS=Arabidopsis thaliana GN=At2g03410 PE=2 SV=1)

HSP 1 Score: 216.853 bits (551), Expect = 8.764e-56
Identity = 107/150 (71.33%), Postives = 127/150 (84.67%), Query Frame = 1
Query:   19 FMELLTRHKSTVAEFLSKNYNWFFAEYNSKLLESSNYITRRQAVKLLGDILLDRSNSVVMTRYVSSRENLRILMNLLRESSKSIQIEAFHVFKLFAANQNKPPDIVSILVANRSKLLRLFADFKTDKEDEQFEADKAQVVKEIAGLEPRD 468
            F ELLTRHKSTVAE+L+KNY WFFAEYN+KLLE  +Y T+RQA KLLGD+L+DRSNS VM +YVSS +NLRI+MNLLRE +K+IQ+EAFH+FKLF AN+NKP DIV+ILVANR+K+LRLFAD K +KED  FE DKA V+ EIA L   D
Sbjct:  193 FRELLTRHKSTVAEYLAKNYEWFFAEYNTKLLEKGSYFTKRQASKLLGDVLMDRSNSGVMVKYVSSLDNLRIMMNLLREPTKNIQLEAFHIFKLFVANENKPEDIVAILVANRTKILRLFADLKPEKEDVGFETDKALVMNEIATLSLLD 342          
BLAST of EY711056 vs. ExPASy Swiss-Prot
Match: MO25_DROME (Protein Mo25 OS=Drosophila melanogaster GN=Mo25 PE=2 SV=2)

HSP 1 Score: 174.481 bits (441), Expect = 4.988e-43
Identity = 84/151 (55.63%), Postives = 116/151 (76.82%), Query Frame = 1
Query:   13 ATFMELLTRHKSTVAEFLSKNYNWFFAEYNSKLLESSNYITRRQAVKLLGDILLDRSNSVVMTRYVSSRENLRILMNLLRESSKSIQIEAFHVFKLFAANQNKPPDIVSILVANRSKLLRLFADFKTDK-EDEQFEADKAQVVKEIAGLEP 462
            +TF ELLTRHK   AEFL  NY+ FF+++  +LL S NY+TRRQ++KLLG++LLDR N  VMTRY+S  ENL+++MN+L+E S++IQ EAFHVFK+F AN NKP  I+ IL+ N++KL+    +F TD+ EDEQF  +KA ++K+I  L+P
Sbjct:  185 STFKELLTRHKLLCAEFLDANYDKFFSQHYQRLLNSENYVTRRQSLKLLGELLLDRHNFTVMTRYISEPENLKLMMNMLKEKSRNIQFEAFHVFKVFVANPNKPKPILDILLRNQTKLVDFLTNFHTDRSEDEQFNDEKAYLIKQIKELKP 335          
BLAST of EY711056 vs. ExPASy Swiss-Prot
Match: DEE76_CHLPR (Degreening-related gene dee76 protein OS=Chlorella protothecoides GN=DEE76 PE=2 SV=1)

HSP 1 Score: 164.851 bits (416), Expect = 3.952e-40
Identity = 82/146 (56.16%), Postives = 110/146 (75.34%), Query Frame = 1
Query:   13 ATFMELLTRHKSTVAEFLSKNYNWFFAEYNSKLLESSNYITRRQAVKLLGDILLDRSNSVVMTRYVSSRENLRILMNLLRESSKSIQIEAFHVFKLFAANQNKPPDIVSILVANRSKLLRLFADFKTDKEDEQFEADKAQVVKEIA 450
            ATF +LLTRHK  VA FL +NY  FF++ + KLL S NY+TRRQ++KLLG++LLDR N  +M +YVS   NL ++MNLL++SS+SIQ EAFHVFK+F AN NK   +  ILV N++KLL    DF  D++DEQF+ +KA ++KEI+
Sbjct:  173 ATFKDLLTRHKQLVAAFLQENYEDFFSQLD-KLLTSDNYVTRRQSLKLLGELLLDRVNVKIMMQYVSDVNNLILMMNLLKDSSRSIQFEAFHVFKVFVANPNKTKPVADILVNNKNKLLTYLEDFHNDRDDEQFKEEKAVIIKEIS 317          
BLAST of EY711056 vs. ExPASy Swiss-Prot
Match: CAB39_MOUSE (Calcium-binding protein 39 OS=Mus musculus GN=Cab39 PE=1 SV=1)

HSP 1 Score: 164.851 bits (416), Expect = 3.952e-40
Identity = 81/150 (54.00%), Postives = 114/150 (76.00%), Query Frame = 1
Query:   13 ATFMELLTRHKSTVAEFLSKNYNWFFAEYNSKLLESSNYITRRQAVKLLGDILLDRSNSVVMTRYVSSRENLRILMNLLRESSKSIQIEAFHVFKLFAANQNKPPDIVSILVANRSKLLRLFADFKTDK-EDEQFEADKAQVVKEIAGLE 459
            ATF +LLTRHK   AEFL ++Y+ FF+EY  KLL S NY+T+RQ++KLLG++LLDR N  +MT+Y+S  ENL+++MNLLR+ S++IQ EAFHVFK+F AN NK   I+ IL+ N++KL+   + F+ D+ EDEQF  +K  +VK+I  L+
Sbjct:  186 ATFKDLLTRHKLLSAEFLEQHYDRFFSEYE-KLLHSENYVTKRQSLKLLGELLLDRHNFTIMTKYISKPENLKLMMNLLRDKSRNIQFEAFHVFKVFVANPNKTQPILDILLKNQTKLIEFLSKFQNDRTEDEQFNDEKTYLVKQIRNLK 334          
BLAST of EY711056 vs. ExPASy Swiss-Prot
Match: CAB39_HUMAN (Calcium-binding protein 39 OS=Homo sapiens GN=CAB39 PE=1 SV=1)

HSP 1 Score: 164.466 bits (415), Expect = 5.162e-40
Identity = 81/150 (54.00%), Postives = 114/150 (76.00%), Query Frame = 1
Query:   13 ATFMELLTRHKSTVAEFLSKNYNWFFAEYNSKLLESSNYITRRQAVKLLGDILLDRSNSVVMTRYVSSRENLRILMNLLRESSKSIQIEAFHVFKLFAANQNKPPDIVSILVANRSKLLRLFADFKTDK-EDEQFEADKAQVVKEIAGLE 459
            ATF +LLTRHK   AEFL ++Y+ FF+EY  KLL S NY+T+RQ++KLLG++LLDR N  +MT+Y+S  ENL+++MNLLR+ S++IQ EAFHVFK+F AN NK   I+ IL+ N++KL+   + F+ D+ EDEQF  +K  +VK+I  L+
Sbjct:  186 ATFKDLLTRHKLLSAEFLEQHYDRFFSEYE-KLLHSENYVTKRQSLKLLGELLLDRHNFTIMTKYISKPENLKLMMNLLRDKSRNIQFEAFHVFKVFVANPNKTQPILDILLKNQAKLIEFLSKFQNDRTEDEQFNDEKTYLVKQIRDLK 334          
BLAST of EY711056 vs. ExPASy Swiss-Prot
Match: CAB39_BOVIN (Calcium-binding protein 39 OS=Bos taurus GN=CAB39 PE=2 SV=1)

HSP 1 Score: 164.466 bits (415), Expect = 5.162e-40
Identity = 81/150 (54.00%), Postives = 114/150 (76.00%), Query Frame = 1
Query:   13 ATFMELLTRHKSTVAEFLSKNYNWFFAEYNSKLLESSNYITRRQAVKLLGDILLDRSNSVVMTRYVSSRENLRILMNLLRESSKSIQIEAFHVFKLFAANQNKPPDIVSILVANRSKLLRLFADFKTDK-EDEQFEADKAQVVKEIAGLE 459
            ATF +LLTRHK   AEFL ++Y+ FF+EY  KLL S NY+T+RQ++KLLG++LLDR N  +MT+Y+S  ENL+++MNLLR+ S++IQ EAFHVFK+F AN NK   I+ IL+ N++KL+   + F+ D+ EDEQF  +K  +VK+I  L+
Sbjct:  186 ATFKDLLTRHKLLSAEFLEQHYDRFFSEYE-KLLHSENYVTKRQSLKLLGELLLDRHNFTIMTKYISKPENLKLMMNLLRDKSRNIQFEAFHVFKVFVANPNKTQPILDILLKNQAKLIEFLSKFQNDRTEDEQFNDEKTYLVKQIRDLK 334          
BLAST of EY711056 vs. ExPASy Swiss-Prot
Match: PMO25_SCHPO (Mo25-like protein OS=Schizosaccharomyces pombe GN=pmo25 PE=2 SV=1)

HSP 1 Score: 155.992 bits (393), Expect = 1.836e-37
Identity = 80/149 (53.69%), Postives = 112/149 (75.17%), Query Frame = 1
Query:   13 ATFMELLTRHKSTVAEFLSKNYNWFFAEYNSKLLESSNYITRRQAVKLLGDILLDRSNSVVMTRYVSSRENLRILMNLLRESSKSIQIEAFHVFKLFAANQNKPPDIVSILVANRSKLLRLFADFKTD-KEDEQFEADKAQVVKEIAGL 456
            +TF  +L  HKS VAEF+S +++ FF +Y + LL+S NY+T+RQ++KLLG+ILL+R+N  VMTRY+SS ENL+++M LLR+ SK+IQ EAFHVFKLF AN  K  +++ IL  N+SKL+   + F TD K DEQF  ++A V+K+I  L
Sbjct:  182 STFKSILLNHKSQVAEFISYHFDEFFKQY-TVLLKSENYVTKRQSLKLLGEILLNRANRSVMTRYISSAENLKLMMILLRDKSKNIQFEAFHVFKLFVANPEKSEEVIEILRRNKSKLISYLSAFHTDRKNDEQFNDERAFVIKQIERL 329          
BLAST of EY711056 vs. ExPASy Swiss-Prot
Match: CB39L_MOUSE (Calcium-binding protein 39-like OS=Mus musculus GN=Cab39l PE=1 SV=3)

HSP 1 Score: 154.836 bits (390), Expect = 4.090e-37
Identity = 75/150 (50.00%), Postives = 112/150 (74.67%), Query Frame = 1
Query:   13 ATFMELLTRHKSTVAEFLSKNYNWFFAEYNSKLLESSNYITRRQAVKLLGDILLDRSNSVVMTRYVSSRENLRILMNLLRESSKSIQIEAFHVFKLFAANQNKPPDIVSILVANRSKLLRLFADFKTDK-EDEQFEADKAQVVKEIAGLE 459
            ATF +LLTRHK  VA+FL +NY+  F +Y  KLL+S NY+T+RQ++KLLG+++LDR N  +MT+Y+S  ENL+++MNLLR+ S +IQ EAFHVFK+F A+ +K   IV IL+ N+ KL+   + F+ ++ +DEQF  +K  ++K+I  L+
Sbjct:  185 ATFKDLLTRHKVLVADFLEQNYDTIFEDYE-KLLQSENYVTKRQSLKLLGELILDRHNFTIMTKYISKPENLKLMMNLLRDKSPNIQFEAFHVFKVFVASPHKTQPIVEILLKNQPKLIEFLSSFQKERTDDEQFADEKNYLIKQIRDLK 333          
The following BLAST results are available for this feature:
BLAST of EY711056 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 14
Match NameE-valueIdentityDescription
MO25N_ARATH2.375e-6987.50Putative MO25-like protein At5g47540 OS=Arabidopsi... [more]
MO25M_ARATH1.349e-6482.24Putative MO25-like protein At4g17270 OS=Arabidopsi... [more]
MO25L_ARATH8.764e-5671.33MO25-like protein At2g03410 OS=Arabidopsis thalian... [more]
MO25_DROME4.988e-4355.63Protein Mo25 OS=Drosophila melanogaster GN=Mo25 PE... [more]
DEE76_CHLPR3.952e-4056.16Degreening-related gene dee76 protein OS=Chlorella... [more]
CAB39_MOUSE3.952e-4054.00Calcium-binding protein 39 OS=Mus musculus GN=Cab3... [more]
CAB39_HUMAN5.162e-4054.00Calcium-binding protein 39 OS=Homo sapiens GN=CAB3... [more]
CAB39_BOVIN5.162e-4054.00Calcium-binding protein 39 OS=Bos taurus GN=CAB39 ... [more]
PMO25_SCHPO1.836e-3753.69Mo25-like protein OS=Schizosaccharomyces pombe GN=... [more]
CB39L_MOUSE4.090e-3750.00Calcium-binding protein 39-like OS=Mus musculus GN... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-702-003-C04-CT.F Sweet orange fruit, development stadium (3 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY711056 ID=EY711056; Name=EY711056; organism=Citrus sinensis; type=EST; length=706bp
CCACGCGTCCGTGCAACTTTTATGGAACTGTTGACAAGGCACAAATCCAC
TGTGGCCGAATTTCTTTCTAAGAATTATAACTGGTTTTTTGCAGAATATA
ACTCAAAACTGTTGGAATCTTCCAATTACATTACCAGACGACAAGCTGTC
AAGCTGTTGGGAGACATATTACTGGATCGGTCAAATTCAGTAGTGATGAC
AAGATATGTGAGCTCAAGGGAAAATTTGAGGATACTCATGAATCTTCTTA
GAGAATCCAGCAAGAGTATCCAGATAGAAGCATTTCATGTTTTCAAGCTG
TTTGCTGCGAATCAAAACAAACCTCCTGACATAGTAAGCATACTCGTTGC
CAACAGAAGCAAGCTTCTACGGTTGTTTGCTGATTTCAAAACTGATAAAG
AGGATGAACAGTTTGAGGCAGACAAAGCTCAGGTTGTGAAGGAAATTGCT
GGTCTTGAGCCAAGAGACCGCCCATGAGCAAGCTTGCTGTATCACTCACG
TGGCAATCTTCTTGTGTTATTTGACATCATTTAAATGTGAATCATATAGC
GGTCATAGTAGTCAAATAATTGGCTAAGTAAGATGTTTATTTTCTAAGTA
CTCAGTATTCCCACCTTTTCTGTAGTTATATATATATAAACTTTGTGTGG
AAAAAGGGAAAAAAAATGAAGAACAAAAATTCATATAAAAAAAAAAAAAA
AAAAAA
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