EY710888

Overview
NameEY710888
Unique NameEY710888
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length933
Libraries
Library NameType
Sweet orange fruit, development stadium (3 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY710888 vs. ExPASy Swiss-Prot
Match: IDI1_CAMAC (Isopentenyl-diphosphate Delta-isomerase I OS=Camptotheca acuminata GN=IPI1 PE=2 SV=1)

HSP 1 Score: 373.629 bits (958), Expect = 8.714e-103
Identity = 179/207 (86.47%), Postives = 190/207 (91.79%), Query Frame = 3
Query:   24 ENDRVVGHENKYNCHLMEKIESLNLLHRAFSVFLFNSKYELLLQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAEDVPVDEFTPLGRILYKAPSDGKWGEHELDYLLFIVRDVSVNPNPDEVAEYKYVNREQLKELLRKADAGEEGLKLSPWVRLGVDNFLFKWWDHLEKGTLTKSLT*RPFHKL 644
            END VVGH+ KYNCHLMEKIES NLLHRAFSVFLFNSKYELLLQQRS TKVTFPLVWTNTCCSHPLYRESELI+ENALG RNAAQRKLLDELGI AEDVPVD+F PLGRILYKAPSDGKWGEHELDYLLFIVRDV+VNPNPDEVA+ KYV R+QLKELLRKADAGEEGLKLSPW RL VDNFLFKWWDH+EKGT+ ++   +  HKL
Sbjct:   28 ENDNVVGHDTKYNCHLMEKIESENLLHRAFSVFLFNSKYELLLQQRSATKVTFPLVWTNTCCSHPLYRESELIKENALGARNAAQRKLLDELGIPAEDVPVDQFIPLGRILYKAPSDGKWGEHELDYLLFIVRDVNVNPNPDEVADIKYVTRDQLKELLRKADAGEEGLKLSPWFRLVVDNFLFKWWDHVEKGTMHEAADMKSIHKL 234          
BLAST of EY710888 vs. ExPASy Swiss-Prot
Match: IDI2_ARATH (Isopentenyl-diphosphate Delta-isomerase II OS=Arabidopsis thaliana GN=IPP2 PE=2 SV=1)

HSP 1 Score: 371.703 bits (953), Expect = 3.311e-102
Identity = 176/207 (85.02%), Postives = 191/207 (92.27%), Query Frame = 3
Query:   24 ENDRVVGHENKYNCHLMEKIESLNLLHRAFSVFLFNSKYELLLQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAEDVPVDEFTPLGRILYKAPSDGKWGEHELDYLLFIVRDVSVNPNPDEVAEYKYVNREQLKELLRKADAGEEGLKLSPWVRLGVDNFLFKWWDHLEKGTLTKSLT*RPFHKL 644
            E DRVVGH++KYNCHLME IE+ NLLHRAFSVFLFNSKYELLLQQRS TKVTFPLVWTNTCCSHPLYRESELI++NALGVRNAAQRKLLDELGI AEDVPVDEFTPLGR+LYKAPSDGKWGEHELDYLLFIVRDV V PNPDEVAE KYV+RE+LKEL++KADAGEEGLKLSPW RL VDNFL KWWDH+EKGTL +++  +  HKL
Sbjct:   78 ETDRVVGHDSKYNCHLMENIEAKNLLHRAFSVFLFNSKYELLLQQRSNTKVTFPLVWTNTCCSHPLYRESELIQDNALGVRNAAQRKLLDELGIVAEDVPVDEFTPLGRMLYKAPSDGKWGEHELDYLLFIVRDVKVQPNPDEVAEIKYVSREELKELVKKADAGEEGLKLSPWFRLVVDNFLMKWWDHVEKGTLVEAIDMKTIHKL 284          
BLAST of EY710888 vs. ExPASy Swiss-Prot
Match: IDI2_CLABR (Isopentenyl-diphosphate Delta-isomerase II OS=Clarkia breweri GN=IPI2 PE=3 SV=2)

HSP 1 Score: 367.851 bits (943), Expect = 4.781e-101
Identity = 177/207 (85.51%), Postives = 192/207 (92.75%), Query Frame = 3
Query:   24 ENDRVVGHENKYNCHLMEKIESLNLLHRAFSVFLFNSKYELLLQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAEDVPVDEFTPLGRILYKAPSDGKWGEHELDYLLFIVRDVSVNPNPDEVAEYKYVNREQLKELLRKADAGEEGLKLSPWVRLGVDNFLFKWWDHLEKGTLTKSLT*RPFHKL 644
            E DRVVGHE+KYNCH+ EKIES N+LHRAFSVFLFNSK+ELLLQQRS TKVTFPLVWTNTCCSHPLYRESELI+EN LGVRNAAQRKLLDELGI AEDVPVDEFTPL R+LYKAPSDGKWGEHELDYLLFIVRDV+V+PNPDEVAE KYVNREQLKELL+KADAGEEGLKLSPW RL VDNFL KWWDH+EKGTL++++  +  HKL
Sbjct:   80 EVDRVVGHESKYNCHMWEKIESGNMLHRAFSVFLFNSKFELLLQQRSATKVTFPLVWTNTCCSHPLYRESELIDENNLGVRNAAQRKLLDELGIPAEDVPVDEFTPLSRMLYKAPSDGKWGEHELDYLLFIVRDVAVHPNPDEVAEIKYVNREQLKELLKKADAGEEGLKLSPWFRLVVDNFLPKWWDHVEKGTLSEAVDMKSIHKL 286          
BLAST of EY710888 vs. ExPASy Swiss-Prot
Match: IDI2_CAMAC (Isopentenyl-diphosphate Delta-isomerase II OS=Camptotheca acuminata GN=IPI2 PE=2 SV=1)

HSP 1 Score: 367.851 bits (943), Expect = 4.781e-101
Identity = 174/208 (83.65%), Postives = 190/208 (91.35%), Query Frame = 3
Query:   24 ENDRVVGHENKYNCHLMEKIESLNLLHRAFSVFLFNSKYELLLQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAEDVPVDEFTPLGRILYKAPSDGKWGEHELDYLLFIVRDVSVNPNPDEVAEYKYVNREQLKELLRKADAGEEGLKLSPWVRLGVDNFLFKWWDHLEKGTLTKSLT*RPFHKLT 647
            END VVGH+ KYNCHLMEKIES NLLHRAFSVFLFNSKYELLLQQRS TKVTFPLVWTNTCCSHP YRESEL++ENALGVRNAAQRKLLDELGI AEDVPVD+F PLGR+LYKAPSDGKWGEHELDYLLFI+RDV+V+PNPDEVA+ KYVN++QLK+LLRK DAGEEGLKLSPW RL V+NFLFKWWDH+EKGTL  +   +  HKLT
Sbjct:  102 ENDHVVGHDTKYNCHLMEKIESDNLLHRAFSVFLFNSKYELLLQQRSATKVTFPLVWTNTCCSHPRYRESELVDENALGVRNAAQRKLLDELGIPAEDVPVDQFIPLGRMLYKAPSDGKWGEHELDYLLFIIRDVNVHPNPDEVADVKYVNQDQLKDLLRKVDAGEEGLKLSPWFRLVVENFLFKWWDHVEKGTLQDATDMKTIHKLT 309          
BLAST of EY710888 vs. ExPASy Swiss-Prot
Match: IDI1_ARATH (Isopentenyl-diphosphate Delta-isomerase I OS=Arabidopsis thaliana GN=IPP1 PE=2 SV=2)

HSP 1 Score: 366.696 bits (940), Expect = 1.065e-100
Identity = 173/207 (83.57%), Postives = 189/207 (91.30%), Query Frame = 3
Query:   24 ENDRVVGHENKYNCHLMEKIESLNLLHRAFSVFLFNSKYELLLQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAEDVPVDEFTPLGRILYKAPSDGKWGEHELDYLLFIVRDVSVNPNPDEVAEYKYVNREQLKELLRKADAGEEGLKLSPWVRLGVDNFLFKWWDHLEKGTLTKSLT*RPFHKL 644
            ENDRVVGH+ KYNCHLMEKIE+ NLLHRAFSVFLFNSKYELLLQQRS TKVTFPLVWTNTCCSHPLYRESELIEEN LGVRNAAQRKL DELGI AEDVPVDEFTPLGR+LYKAPSDGKWGEHE+DYLLFIVRDV + PNPDEVAE KYV+RE+LKEL++KADAG+E +KLSPW RL VDNFL KWWDH+EKGT+T++   +  HKL
Sbjct:   27 ENDRVVGHDTKYNCHLMEKIEAENLLHRAFSVFLFNSKYELLLQQRSKTKVTFPLVWTNTCCSHPLYRESELIEENVLGVRNAAQRKLFDELGIVAEDVPVDEFTPLGRMLYKAPSDGKWGEHEVDYLLFIVRDVKLQPNPDEVAEIKYVSREELKELVKKADAGDEAVKLSPWFRLVVDNFLMKWWDHVEKGTITEAADMKTIHKL 233          
BLAST of EY710888 vs. ExPASy Swiss-Prot
Match: IDI1_CLABR (Isopentenyl-diphosphate Delta-isomerase I OS=Clarkia breweri GN=IPI1 PE=2 SV=2)

HSP 1 Score: 364.385 bits (934), Expect = 5.286e-100
Identity = 173/207 (83.57%), Postives = 189/207 (91.30%), Query Frame = 3
Query:   24 ENDRVVGHENKYNCHLMEKIESLNLLHRAFSVFLFNSKYELLLQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAEDVPVDEFTPLGRILYKAPSDGKWGEHELDYLLFIVRDVSVNPNPDEVAEYKYVNREQLKELLRKADAGEEGLKLSPWVRLGVDNFLFKWWDHLEKGTLTKSLT*RPFHKL 644
            END+VVGHE+KYNCHLMEKIES NLLHRAFSVFLFNSKYELLLQQRS TKVTFPLVWTNTCCSHPLYRESELI+EN LGVRNAAQRKLLDELGI AED+PVD+F PL RILYKAPSDGKWGEHELDYLLFI+RDV+++PNPDEVAE KY+NR+ LKELLRKADA EEG+KLSPW RL VDNFLFKWWDH+EKG+L  +   +  HKL
Sbjct:   81 ENDKVVGHESKYNCHLMEKIESENLLHRAFSVFLFNSKYELLLQQRSATKVTFPLVWTNTCCSHPLYRESELIDENCLGVRNAAQRKLLDELGIPAEDLPVDQFIPLSRILYKAPSDGKWGEHELDYLLFIIRDVNLDPNPDEVAEVKYMNRDDLKELLRKADAEEEGVKLSPWFRLVVDNFLFKWWDHVEKGSLKDAADMKTIHKL 287          
BLAST of EY710888 vs. ExPASy Swiss-Prot
Match: IDI2_CLAXA (Isopentenyl-diphosphate Delta-isomerase II OS=Clarkia xantiana GN=IPI2 PE=3 SV=1)

HSP 1 Score: 360.533 bits (924), Expect = 7.633e-99
Identity = 173/207 (83.57%), Postives = 189/207 (91.30%), Query Frame = 3
Query:   24 ENDRVVGHENKYNCHLMEKIESLNLLHRAFSVFLFNSKYELLLQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAEDVPVDEFTPLGRILYKAPSDGKWGEHELDYLLFIVRDVSVNPNPDEVAEYKYVNREQLKELLRKADAGEEGLKLSPWVRLGVDNFLFKWWDHLEKGTLTKSLT*RPFHKL 644
            E D VVGHE+KYNCHL EKIES N+LHRAF+VFLFNSK+ELLLQQRS TKVTFPLVWTNTCCSHPLYRESELI+EN LGVRNAAQRKLLDELGI AEDVPVDEFTP+ R+LYKAPSDGKWGEHELDYLLFIVRDV ++PNPDEVA+ KYVNREQLKELLRKADAGEEGLKLSPW RL VDNFL KWWDH+EKGTL++++  +  H L
Sbjct:   84 EVDCVVGHESKYNCHLWEKIESGNMLHRAFTVFLFNSKFELLLQQRSATKVTFPLVWTNTCCSHPLYRESELIDENNLGVRNAAQRKLLDELGIPAEDVPVDEFTPVSRMLYKAPSDGKWGEHELDYLLFIVRDVGIHPNPDEVADIKYVNREQLKELLRKADAGEEGLKLSPWFRLVVDNFLPKWWDHVEKGTLSEAVDMKTIHNL 290          
BLAST of EY710888 vs. ExPASy Swiss-Prot
Match: IDI1_MACFA (Isopentenyl-diphosphate Delta-isomerase 1 OS=Macaca fascicularis GN=IDI1 PE=2 SV=2)

HSP 1 Score: 228.409 bits (581), Expect = 4.527e-59
Identity = 112/190 (58.95%), Postives = 144/190 (75.79%), Query Frame = 3
Query:   24 ENDRVVGHENKYNCHLMEKIESLNLLHRAFSVFLFNSKYELLLQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAEDVPVDEFTPLGRILYKAPSDGKWGEHELDYLLFIVRDVSVNPNPDEVAEYKYVNREQLKELLRKADAGEEGLKLSPWVRLGVDNFLFKWWDHL 593
            END  +G E K NCHL E IE   LLHRAFSVFLFN++ +LLLQQRS  K+TFP  +TNTCCSHPL    EL E +ALGVR AAQR+L  ELGI  E+VP +E   L RI YKA SDG WGEHE+DY+LF+ ++V++NP+P+E+  + YV++E+LKELL+KA  GE  +K++PW ++  + FLFKWWD+L
Sbjct:   26 ENDNKIGAETKKNCHLNENIEK-GLLHRAFSVFLFNTENKLLLQQRSDAKITFPGCFTNTCCSHPLSNPGELEENDALGVRRAAQRRLKAELGIPLEEVPPEEINYLTRIHYKAQSDGIWGEHEIDYILFVRKNVTLNPDPNEIKSFCYVSKEELKELLKKAANGE--IKITPWFQIIAETFLFKWWDNL 212          
BLAST of EY710888 vs. ExPASy Swiss-Prot
Match: IDI1_HUMAN (Isopentenyl-diphosphate Delta-isomerase 1 OS=Homo sapiens GN=IDI1 PE=1 SV=2)

HSP 1 Score: 228.024 bits (580), Expect = 5.913e-59
Identity = 112/190 (58.95%), Postives = 144/190 (75.79%), Query Frame = 3
Query:   24 ENDRVVGHENKYNCHLMEKIESLNLLHRAFSVFLFNSKYELLLQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAEDVPVDEFTPLGRILYKAPSDGKWGEHELDYLLFIVRDVSVNPNPDEVAEYKYVNREQLKELLRKADAGEEGLKLSPWVRLGVDNFLFKWWDHL 593
            END  +G E K NCHL E IE   LLHRAFSVFLFN++ +LLLQQRS  K+TFP  +TNTCCSHPL   +EL E +ALGVR AAQR+L  ELGI  E+VP +E   L RI YKA SDG WGEHE+DY+L + ++V++NP+P+E+  Y YV++E+LKELL+KA +GE  +K++PW ++    FLFKWWD+L
Sbjct:   26 ENDNKIGAETKKNCHLNENIEK-GLLHRAFSVFLFNTENKLLLQQRSDAKITFPGCFTNTCCSHPLSNPAELEESDALGVRRAAQRRLKAELGIPLEEVPPEEINYLTRIHYKAQSDGIWGEHEIDYILLVRKNVTLNPDPNEIKSYCYVSKEELKELLKKAASGE--IKITPWFKIIAATFLFKWWDNL 212          
BLAST of EY710888 vs. ExPASy Swiss-Prot
Match: IDI1_PONAB (Isopentenyl-diphosphate Delta-isomerase 1 OS=Pongo abelii GN=IDI1 PE=2 SV=2)

HSP 1 Score: 226.868 bits (577), Expect = 1.317e-58
Identity = 111/190 (58.42%), Postives = 143/190 (75.26%), Query Frame = 3
Query:   24 ENDRVVGHENKYNCHLMEKIESLNLLHRAFSVFLFNSKYELLLQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAEDVPVDEFTPLGRILYKAPSDGKWGEHELDYLLFIVRDVSVNPNPDEVAEYKYVNREQLKELLRKADAGEEGLKLSPWVRLGVDNFLFKWWDHL 593
            END  +G E K NCHL E IE   LLHRAFSVFLFN++ +LLLQQRS  K+T P  +TNTCCSHPL    EL E +ALGVR AAQR+L  ELGI  E+VP +E   L RI YKA SDG WGEHE+DY+L + ++V++NP+P+E+  Y YV++E+LKELL+KA +GE  +K++PW ++  + FLFKWWD+L
Sbjct:   26 ENDNKIGAETKKNCHLNENIEK-GLLHRAFSVFLFNTENKLLLQQRSDAKITLPGCFTNTCCSHPLSNPGELEENDALGVRRAAQRRLKAELGIPLEEVPPEEINYLTRIHYKAQSDGIWGEHEIDYILLVRKNVTLNPDPNEIKSYCYVSKEELKELLKKAASGE--IKITPWFKIIAETFLFKWWDNL 212          
The following BLAST results are available for this feature:
BLAST of EY710888 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 41
Match NameE-valueIdentityDescription
IDI1_CAMAC8.714e-10386.47Isopentenyl-diphosphate Delta-isomerase I OS=Campt... [more]
IDI2_ARATH3.311e-10285.02Isopentenyl-diphosphate Delta-isomerase II OS=Arab... [more]
IDI2_CLABR4.781e-10185.51Isopentenyl-diphosphate Delta-isomerase II OS=Clar... [more]
IDI2_CAMAC4.781e-10183.65Isopentenyl-diphosphate Delta-isomerase II OS=Camp... [more]
IDI1_ARATH1.065e-10083.57Isopentenyl-diphosphate Delta-isomerase I OS=Arabi... [more]
IDI1_CLABR5.286e-10083.57Isopentenyl-diphosphate Delta-isomerase I OS=Clark... [more]
IDI2_CLAXA7.633e-9983.57Isopentenyl-diphosphate Delta-isomerase II OS=Clar... [more]
IDI1_MACFA4.527e-5958.95Isopentenyl-diphosphate Delta-isomerase 1 OS=Macac... [more]
IDI1_HUMAN5.913e-5958.95Isopentenyl-diphosphate Delta-isomerase 1 OS=Homo ... [more]
IDI1_PONAB1.317e-5858.42Isopentenyl-diphosphate Delta-isomerase 1 OS=Pongo... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-702-001-D02-CT.F Sweet orange fruit, development stadium (3 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY710888 ID=EY710888; Name=EY710888; organism=Citrus sinensis; type=EST; length=933bp
CCACGCGTCCGCCCACGCGTCCGGAGAATGATCGCGTTGTTGGTCATGAA
AACAAATACAACTGTCACTTGATGGAAAAGATAGAGTCTTTGAATTTGCT
ACACAGAGCCTTCAGCGTATTTTTGTTTAACTCAAAATATGAGCTACTCC
TTCAGCAACGCTCTGGAACCAAAGTTACCTTCCCTCTTGTGTGGACTAAC
ACCTGCTGCAGCCATCCTCTGTACCGTGAATCTGAGCTTATTGAGGAGAA
CGCTCTTGGGGTGAGGAATGCTGCACAAAGAAAGCTTTTGGATGAGCTGG
GCATTTGTGCTGAAGATGTGCCAGTTGATGAGTTCACTCCACTGGGTCGC
ATTCTGTACAAGGCCCCTTCTGATGGCAAGTGGGGGGAGCATGAACTTGA
CTACTTGCTTTTCATTGTCCGAGATGTTAGTGTTAACCCAAATCCTGATG
AAGTAGCCGAGTATAAATATGTCAACCGGGAACAGTTAAAAGAGCTTTTG
AGGAAAGCAGATGCTGGAGAAGAAGGTTTGAAGCTGTCTCCTTGGGTCAG
ACTGGGTGTGGACAATTTCTTGTTCAAGTGGTGGGATCACCTCGAAAAAG
GTACCTTAACGAAGTCATTGACATGAAGACCATTTCACAAGTTGACTTAA
TAAAAGCGCAGGCCCTTTGAACACAGTATTTTGTGGGCCGGAACCTGTAT
TCCAATAAGTTTGGGCATTTGAAAGTTCTTCAGAACATAAAGGGTACCCA
GTATCTTCTCACGGGTTCTTTAATCCAATAATTTGGAATAGGGAAAGTTC
TACACAAATTACCTTTTGGTGGTGACGTACCTAACCTTTCAAAGGGGCGG
CTTTTGGAAATTTTATTGGAAAGTTGGAATTGAACATACATAGGGTTAAA
AAAAAATAAAATCGGTTTCTCAATAAAAAAAAA
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