EY710829

Overview
NameEY710829
Unique NameEY710829
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length868
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY710829 vs. ExPASy Swiss-Prot
Match: LOX2_ARATH (Lipoxygenase 2, chloroplastic OS=Arabidopsis thaliana GN=LOX2 PE=1 SV=1)

HSP 1 Score: 164.081 bits (414), Expect = 9.439e-40
Identity = 77/124 (62.10%), Postives = 94/124 (75.81%), Query Frame = 1
Query:    1 YAAYFPNRPTIARVNMPDEDPTEKFWKTFIEKPEDALLYTFPNQDQAILVIATLDLLSTHSPDEEFLGKGKEPAWGEDPVINAAFKKFSGRLMELEGIIDERNGDSTLVNRNGAGVVPYNLLKP 372
            Y  YFPNRPT  R+ MP EDPT++  K F E PE  LL T+P+Q QA LV+ TLDLLSTHSPDEE++G+ +E +W  +PVINAAF++F G+L  LEG+IDERN + TL NR GAGVV Y LLKP
Sbjct:  756 YGGYFPNRPTTTRIRMPTEDPTDEALKEFYESPEKVLLKTYPSQKQATLVMVTLDLLSTHSPDEEYIGEQQEASWANEPVINAAFERFKGKLQYLEGVIDERNVNITLKNRAGAGVVKYELLKP 879          
BLAST of EY710829 vs. ExPASy Swiss-Prot
Match: LOX23_HORVU (Lipoxygenase 2.3, chloroplastic OS=Hordeum vulgare GN=LOX2.3 PE=1 SV=1)

HSP 1 Score: 150.214 bits (378), Expect = 1.411e-35
Identity = 71/125 (56.80%), Postives = 93/125 (74.40%), Query Frame = 1
Query:    1 YAAYFPNRPTIARVNMPDEDPTEKFWKTFIEKPEDALLYTFPNQDQAILVIATLDLLSTHSPDEEFLGKGKEPAWGEDPVINAAFKKFSGRLMELEGIIDERNGDSTLVNRNGAGVVPYNLLKPY 375
            YA YFPNRPT+ R N+P E+  +   K F+ +PE+ LL + P+Q QAI V+ATLD+LS+HSPDEE++G+  EPAW  +P++ AAF+KFSGRL E EG ID RN +    NR GAG+VPY LLKP+
Sbjct:  756 YAGYFPNRPTVVRRNIPVEENRDDEMKKFMARPEEVLLQSLPSQMQAIKVMATLDILSSHSPDEEYMGEYAEPAWLAEPMVKAAFEKFSGRLKEAEGTIDMRNNNPENKNRCGAGIVPYELLKPF 880          
BLAST of EY710829 vs. ExPASy Swiss-Prot
Match: LOXC2_ORYSJ (Probable lipoxygenase 8, chloroplastic OS=Oryza sativa subsp. japonica GN=CM-LOX2 PE=2 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 3.365e-29
Identity = 62/126 (49.21%), Postives = 85/126 (67.46%), Query Frame = 1
Query:    1 YAAYFPNRPTIARVNMPDEDPTE-KFWKTFIEKPEDALLYTFPNQDQAILVIATLDLLSTHSPDEEFLGKGKEPAWGEDPVINAAFKKFSGRLMELEGIIDERNGDSTLVNRNGAGVVPYNLLKPY 375
            +  YFPNRP+IAR  MP E+P +    + F++ P+ AL   FP+Q QA +V+A LD+LSTHS DEE+LG  +   W  D  + AA+  F+ RL E+EG+ID RN D  L NR GAG++PY L+KP+
Sbjct:  800 FGGYFPNRPSIARTVMPVEEPVDGAAMERFLDNPDQALRECFPSQVQATVVMAVLDVLSTHSTDEEYLGGEQTRPWNSDAAVQAAYAGFTARLKEIEGVIDGRNKDRKLKNRCGAGILPYQLMKPF 925          
BLAST of EY710829 vs. ExPASy Swiss-Prot
Match: LOXC1_ORYSJ (Lipoxygenase 7, chloroplastic OS=Oryza sativa subsp. japonica GN=CM-LOX1 PE=2 SV=2)

HSP 1 Score: 127.487 bits (319), Expect = 9.791e-29
Identity = 61/126 (48.41%), Postives = 85/126 (67.46%), Query Frame = 1
Query:    1 YAAYFPNRPTIARVNMPDEDPTE-KFWKTFIEKPEDALLYTFPNQDQAILVIATLDLLSTHSPDEEFLGKGKEPAWGEDPVINAAFKKFSGRLMELEGIIDERNGDSTLVNRNGAGVVPYNLLKPY 375
            +  YFPNRP+IAR  MP E+P +    + F++ P+ AL   FP+Q QA +V+A LD+LS+HS DEE+LG  +   W  D  + AA+  F+ RL E+EG+ID RN D  L NR GAG++PY L+KP+
Sbjct:  783 FGGYFPNRPSIARTVMPVEEPVDGAAMERFLDNPDQALRECFPSQVQATVVMAVLDVLSSHSTDEEYLGGEQTRPWNSDAAVQAAYDGFAARLKEIEGVIDGRNKDRKLKNRCGAGILPYQLMKPF 908          
BLAST of EY710829 vs. ExPASy Swiss-Prot
Match: LOX21_HORVU (Lipoxygenase 2.1, chloroplastic OS=Hordeum vulgare GN=LOX2.1 PE=1 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 6.346e-28
Identity = 64/123 (52.03%), Postives = 84/123 (68.29%), Query Frame = 1
Query:    4 AAYFPNRPTIARVNMPDEDPTEKFWKTFIEKPEDALLYTFPNQDQAILVIATLDLLSTHSPDEEFLGKGKEPAWGEDPVINAAFKKFSGRLMELEGIIDERNGDSTLVNRNGAGVVPYNLLKP 372
            A Y PNRPT+AR NMP E   +   + F+E PE  LL TFP+Q Q+ +V+A LDLLSTHS DEE++G  +EPAW +D VIN AF++F     ++   +DE N D    NR+GAG+VPY LL+P
Sbjct:  788 AGYIPNRPTMARRNMPTEIGGDDM-RDFVEAPEKVLLDTFPSQYQSAIVLAILDLLSTHSSDEEYMGTHEEPAWTKDGVINQAFEEFKESTRKIVEQVDEWNNDPDRKNRHGAGMVPYVLLRP 909          
BLAST of EY710829 vs. ExPASy Swiss-Prot
Match: LOX22_HORVU (Lipoxygenase 2.2, chloroplastic OS=Hordeum vulgare GN=LOX2.2 PE=1 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 2.113e-23
Identity = 57/123 (46.34%), Postives = 80/123 (65.04%), Query Frame = 1
Query:    4 AAYFPNRPTIARVNMPDEDPTEKFWKTFIEKPEDALLYTFPNQDQAILVIATLDLLSTHSPDEEFLGKGKEPAWGEDPVINAAFKKFSGRLMELEGIIDERNGDSTLVNRNGAGVVPYNLLKP 372
            A Y PN P+IAR NMP E   E+    F   PE   L T P+Q Q ++V+ATLDLLS+H+ DEE++G  +EPAW  D  ++ AF+ F  ++ ++   ++E N D +  NR+GAGVVPY LL+P
Sbjct:  789 AGYVPNHPSIARRNMPCEMGPEEML-AFKAAPEKVWLDTLPSQLQTVMVMATLDLLSSHASDEEYMGTHQEPAWQRDGEVDKAFQVFQKKMRDIAEQVEEWNKDDSRRNRHGAGVVPYVLLRP 910          
BLAST of EY710829 vs. ExPASy Swiss-Prot
Match: LOX3_ORYSJ (Putative lipoxygenase 3 OS=Oryza sativa subsp. japonica GN=Os03g0700400 PE=3 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 7.514e-21
Identity = 54/124 (43.55%), Postives = 74/124 (59.68%), Query Frame = 1
Query:    1 YAAYFPNRPTIARVNMPDEDPTEKFWKTFIEKPEDALLYTFPNQDQAILVIATLDLLSTHSPDEEFLGKGKEPAWGEDPVINAAFKKFSGRLMELEGIIDERNGDSTLVNRNGAGVVPYNLLKP 372
            YA Y PNRPT++R  MP+  P  + +      PE A + T  +Q Q I+ I+ +++LS HS DE +LG+   PAW  D     AF++FS RL+E+EG +   NGD+ L NRNG    PY LL P
Sbjct:  722 YAGYLPNRPTVSRRRMPE--PGTEAYGELGRDPERAFIRTITSQLQTIIGISLIEVLSKHSSDEVYLGQRDTPAWTSDARALEAFRRFSDRLVEIEGKVVGMNGDAGLKNRNGPAEFPYMLLYP 843          
BLAST of EY710829 vs. ExPASy Swiss-Prot
Match: LOX1_HORVU (Lipoxygenase 1 OS=Hordeum vulgare GN=LOX1.1 PE=1 SV=2)

HSP 1 Score: 97.4413 bits (241), Expect = 1.085e-19
Identity = 51/124 (41.13%), Postives = 71/124 (57.26%), Query Frame = 1
Query:    1 YAAYFPNRPTIARVNMPDEDPTEKFWKTFIEKPEDALLYTFPNQDQAILVIATLDLLSTHSPDEEFLGKGKEPAWGEDPVINAAFKKFSGRLMELEGIIDERNGDSTLVNRNGAGVVPYNLLKP 372
            YA + PNRPT++R  MP+  P  + +      PE A ++T  +Q Q I+ ++ L++LS HS DE +LG+   P W  DP     FK+FS RL+E+E  +   N D  L NRNG    PY LL P
Sbjct:  718 YAGFLPNRPTVSRRRMPE--PGTEEYAELERDPERAFIHTITSQIQTIIGVSLLEVLSKHSSDELYLGQRDTPEWTSDPKALEVFKRFSDRLVEIESKVVGMNHDPELKNRNGPAKFPYMLLYP 839          
BLAST of EY710829 vs. ExPASy Swiss-Prot
Match: LOX6_ARATH (Lipoxygenase 6, choloroplastic OS=Arabidopsis thaliana GN=LOX6 PE=1 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 1.417e-19
Identity = 54/126 (42.86%), Postives = 76/126 (60.32%), Query Frame = 1
Query:    1 YAAYFPNRPTIARVNMPDEDPTEKFWKTFIEKPEDALLYTFPNQDQAILVIATLDLLSTHSPDEEFLGKGKEPA--WGEDPVINAAFKKFSGRLMELEGIIDERNGDSTLVNRNGAGVVPYNLLKP 372
            +  Y PNRPT+ R  +P E  T+  ++ F+  P+ + L + P Q QA  V+A  + LSTHSPDEE+L + +E    W +D  +   F KFS  L+++E  I+ERN D  L NR GAG+ PY LL P
Sbjct:  777 FGGYVPNRPTLLRKLIPQE--TDPDYEMFMRNPQYSFLGSLPTQLQATKVMAVQETLSTHSPDEEYLIELREVQRHWFQDEQVVKYFNKFSEELVKIEKTINERNKDKKLKNRTGAGMPPYELLLP 900          
BLAST of EY710829 vs. ExPASy Swiss-Prot
Match: LOX4_ARATH (Lipoxygenase 4, chloroplastic OS=Arabidopsis thaliana GN=LOX4 PE=2 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 1.851e-19
Identity = 53/125 (42.40%), Postives = 74/125 (59.20%), Query Frame = 1
Query:    1 YAAYFPNRPTIARVNMPDEDPTEKFWKTFIEKPEDALLYTFPNQDQAILVIATLDLLSTHSPDEEFLGKGKEPA-WGEDPVINAAFKKFSGRLMELEGIIDERNGDSTLVNRNGAGVVPYNLLKP 372
            Y  Y PNRP + R  +PDE   E  + +FIE P+     + P+  Q    +A +D LSTHSPDEE++G+ ++P+ W  D  I  AF  FS  +  +E  ID+RN D +  NR GAGV+PY L+ P
Sbjct:  787 YGGYVPNRPPLMRRLIPDESDPE--FTSFIEDPQKYFFSSMPSLLQTTKFMAVVDTLSTHSPDEEYIGERQQPSIWTGDAEIVDAFYGFSAEIGRIEKEIDKRNRDPSRRNRCGAGVLPYELMAP 909          
The following BLAST results are available for this feature:
BLAST of EY710829 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 31
Match NameE-valueIdentityDescription
LOX2_ARATH9.439e-4062.10Lipoxygenase 2, chloroplastic OS=Arabidopsis thali... [more]
LOX23_HORVU1.411e-3556.80Lipoxygenase 2.3, chloroplastic OS=Hordeum vulgare... [more]
LOXC2_ORYSJ3.365e-2949.21Probable lipoxygenase 8, chloroplastic OS=Oryza sa... [more]
LOXC1_ORYSJ9.791e-2948.41Lipoxygenase 7, chloroplastic OS=Oryza sativa subs... [more]
LOX21_HORVU6.346e-2852.03Lipoxygenase 2.1, chloroplastic OS=Hordeum vulgare... [more]
LOX22_HORVU2.113e-2346.34Lipoxygenase 2.2, chloroplastic OS=Hordeum vulgare... [more]
LOX3_ORYSJ7.514e-2143.55Putative lipoxygenase 3 OS=Oryza sativa subsp. jap... [more]
LOX1_HORVU1.085e-1941.13Lipoxygenase 1 OS=Hordeum vulgare GN=LOX1.1 PE=1 S... [more]
LOX6_ARATH1.417e-1942.86Lipoxygenase 6, choloroplastic OS=Arabidopsis thal... [more]
LOX4_ARATH1.851e-1942.40Lipoxygenase 4, chloroplastic OS=Arabidopsis thali... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-701-093-F08-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY710829 ID=EY710829; Name=EY710829; organism=Citrus sinensis; type=EST; length=868bp
TATGCAGCCTACTTCCCCAACCGGCCAACAATTGCAAGAGTAAACATGCC
AGATGAAGATCCAACTGAAAAATTTTGGAAAACATTCATTGAAAAACCTG
AAGATGCACTTTTGTACACCTTCCCCAATCAGGATCAAGCCATTCTAGTT
ATAGCCACCCTCGATTTGCTATCGACTCATTCTCCTGATGAGGAGTTCTT
AGGGAAAGGTAAGGAGCCAGCATGGGGTGAAGATCCAGTCATAAACGCTG
CATTCAAGAAGTTTAGTGGCAGGTTGATGGAGCTTGAAGGAATTATTGAT
GAAAGGAATGGAGATAGCACTTTGGTGAATAGAAATGGAGCTGGGGTTGT
TCCATATAATCTCTTGAAGCCCTATTGGAAAAGATGGAGACAAAAGAGAA
AGGAGTTCCATACAGCATCTCTAATCTAGACTCGCTGAAGTCCGGGTCTT
TGTGCCAAAAATTTCGAATGCATGCATTGGGGTTCGTCAACTTTTAGTAA
GCATTGTATCTTTTTTTTTACCCTGGAAAAAAATGGACAACGAACCTCCT
TTTAAAATGGTTATTTTTAAAAAAAAAATTGACCGGCCCTCCCCAAGGGT
TCTTAAAAAAAAAAAAAAAAAAAAAAAAAAAGGGAGGGCGCTCTGAAAGG
GATCCAAGCTTAAATACGCGGGGAGTGCGGGCACCAAAAGTCTTCCATAA
GGGGCACCTAAATTCAATTACCGGGGCCGACCTTTTTAAAAGACGGAGAC
GGGGGAAAAACCCAGGGGTTTAACCCAAATTAATACCCCTTTAGAGAAAA
TTTCCCCCATTTTCCCAAAAAGGGGGAAAAAAAAAAAAAAAAACACGCAC
CAAACACACGCCCTTCCC
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