EY710771
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of EY710771 vs. ExPASy Swiss-Prot
Match: FAD3C_SOYBN (Omega-3 fatty acid desaturase, chloroplastic OS=Glycine max GN=FAD7 PE=2 SV=1) HSP 1 Score: 177.948 bits (450), Expect = 6.171e-44 Identity = 107/241 (44.40%), Postives = 124/241 (51.45%), Query Frame = 2 Query: 29 RDRNWGLKVSAPLRVAPLEGEDXXXXXXXXXXXXXXXXXXXXXXXXFDPGAPPPFKLADIRAAIPKHCWVKDPWKSMSYXXXXXXXXXXXXXXXXXXXXXXXXPLYWAAQGTMFWALFVLGHDCGHGSFSNDPKLK*CGGASAAFFNSGFLI--MDGKITTGLIIKTMGMLRMDDPGTRLAEKIYRTLDRGDRFFEIQNPFSPAWNSPFYFWGRSRGKMGFHFGPPRGAWLVRGKEKEGIT 745 R+RNWGLKVSAPLRVA +E E FDPGAPPPF LADIRAAIPKHCWVKDPW+SMSY PLYWAAQGTMFWALFVLGHDCGHGSFSN+ KL +S L+ +I+ + G D+ L EK++R+LD R PF P P Y + RS GK G HF P + V + K+ IT Sbjct: 55 RERNWGLKVSAPLRVASIEEEQKSVDLTNGTNGVEHEKLPE-----FDPGAPPPFNLADIRAAIPKHCWVKDPWRSMSYVVRDVIAVFGLAAAAAYLNNWLVWPLYWAAQGTMFWALFVLGHDCGHGSFSNNSKL---NSVVGHLLHSSILVPYHGWRISHRTHHQHHGHAENDESWHPLPEKLFRSLDTVTRMLRFTAPF-PLLAFPVYLFSRSPGKTGSHFDPSSDLF-VPNERKDVIT 285
BLAST of EY710771 vs. ExPASy Swiss-Prot
Match: FAD3C_SESIN (Omega-3 fatty acid desaturase, chloroplastic OS=Sesamum indicum GN=FAD7 PE=2 SV=1) HSP 1 Score: 176.792 bits (447), Expect = 1.375e-43 Identity = 100/245 (40.82%), Postives = 122/245 (49.80%), Query Frame = 2 Query: 29 RDRNWGLKVSAPLRVAPLEGEDXXXXXXXXXXXXXXXXXXXXXXXXFDPGAPPPFKLADIRAAIPKHCWVKDPWKSMSYXXXXXXXXXXXXXXXXXXXXXXXXPLYWAAQGTMFWALFVLGHDCGHGSFSNDPKLK*CGGASAAFFNSGFLI--MDGKITTGLIIKTMGMLRMDDPGTRLAEKIYRTLDRGDRFFEIQNPFSPAWNSPFYFWGRSRGKMGFHFGPPRGAWLVRGKEKEGITQILW 757 R++NW L+VSAPLRV +E E+ FDPGAPPPFKL+DIR AIPKHCWVKDPW+SM Y PLYW AQ TMFWALFVLGHDCGHGSFSNDPKL +S L+ +I+ + G + D+ L+EKIY+ LD + PF P P Y W RS GK G HF P ++ K+ + + W Sbjct: 56 REKNWALRVSAPLRVLQVEEEEENKEGERVINGGEE----------FDPGAPPPFKLSDIREAIPKHCWVKDPWRSMGYVVRDVAVVFGLAAVAAYFNNWVVWPLYWFAQSTMFWALFVLGHDCGHGSFSNDPKL---NSVVGHILHSSILVPYHGWRISHRTHHQNHGHVENDESWHPLSEKIYKNLDTATKKLRFTLPF-PLLAYPIYLWSRSPGKQGSHFHPDSDLFVPNEKKDVITSTVCW 286
BLAST of EY710771 vs. ExPASy Swiss-Prot
Match: FAD3D_ARATH (Temperature-sensitive omega-3 fatty acid desaturase, chloroplastic OS=Arabidopsis thaliana GN=FAD8 PE=2 SV=1) HSP 1 Score: 172.17 bits (435), Expect = 3.386e-42 Identity = 98/249 (39.36%), Postives = 121/249 (48.59%), Query Frame = 2 Query: 17 GDFSRDRNWGLKVSAPLRVAPLEGEDXXXXXXXXXXXXXXXXXXXXXXXXFDPGAPPPFKLADIRAAIPKHCWVKDPWKSMSYXXXXXXXXXXXXXXXXXXXXXXXXPLYWAAQGTMFWALFVLGHDCGHGSFSNDPKLK*CGGASAAFFNSGFLI--MDGKITTGLIIKTMGMLRMDDPGTRLAEKIYRTLDRGDRFFEIQNPFSPAWNSPFYFWGRSRGKMGFHFGPPRGAWLVRGKEKEGITQILW 757 G +S+ RNW L V+ PL E+ FDPGAPPPF LADIRAAIPKHCWVK+PW SMSY PLYW AQGTMFWALFVLGHDCGHGSFSNDP+L + +S L+ +I+ + G + D+ L E IY+ L++ + F PF P PFY W RS GK G H+ P +L + K+ + W Sbjct: 51 GFYSKTRNWALNVATPLTTLQSPSEEDTER--------------------FDPGAPPPFNLADIRAAIPKHCWVKNPWMSMSYVVRDVAIVFGLAAVAAYFNNWLLWPLYWFAQGTMFWALFVLGHDCGHGSFSNDPRL---NSVAGHLLHSSILVPYHGWRISHRTHHQNHGHVENDESWHPLPESIYKNLEKTTQMFRFTLPF-PMLAYPFYLWNRSPGKQGSHYHPDSDLFLPKEKKDVLTSTACW 275
BLAST of EY710771 vs. ExPASy Swiss-Prot
Match: FAD3C_ARATH (Omega-3 fatty acid desaturase, chloroplastic OS=Arabidopsis thaliana GN=FAD7 PE=1 SV=1) HSP 1 Score: 172.17 bits (435), Expect = 3.386e-42 Identity = 104/254 (40.94%), Postives = 125/254 (49.21%), Query Frame = 2 Query: 26 SRD---RNWGLKVSAPLRV-----APLEGEDXXXXXXXXXXXXXXXXXXXXXXXXFDPGAPPPFKLADIRAAIPKHCWVKDPWKSMSYXXXXXXXXXXXXXXXXXXXXXXXXPLYWAAQGTMFWALFVLGHDCGHGSFSNDPKLK*CGGASAAFFNSGFLI--MDGKITTGLIIKTMGMLRMDDPGTRLAEKIYRTLDRGDRFFEIQNPFSPAWNSPFYFWGRSRGKMGFHFGPPRGAWLVRGKEKEGITQILW 757 SRD RNW L VS PL +PLE ++ FDPGAPPPF LADIRAAIPKHCWVK+PWKS+SY PLYW AQGTMFWALFVLGHDCGHGSFSNDPKL +S L+ +I+ + G + D+ ++EKIY TLD+ RFF P PFY W RS GK G H+ P +L + ++ + W Sbjct: 54 SRDGFTRNWALNVSTPLTTPIFEESPLEEDNKQR---------------------FDPGAPPPFNLADIRAAIPKHCWVKNPWKSLSYVVRDVAIVFALAAGAAYLNNWIVWPLYWLAQGTMFWALFVLGHDCGHGSFSNDPKL---NSVVGHLLHSSILVPYHGWRISHRTHHQNHGHVENDESWHPMSEKIYNTLDKPTRFFRFTLPL-VMLAYPFYLWARSPGKKGSHYHPDSDLFLPKERKDVLTSTACW 282
BLAST of EY710771 vs. ExPASy Swiss-Prot
Match: FAD3C_BRANA (Omega-3 fatty acid desaturase, chloroplastic (Fragment) OS=Brassica napus GN=FAD7 PE=2 SV=1) HSP 1 Score: 169.859 bits (429), Expect = 1.680e-41 Identity = 100/248 (40.32%), Postives = 121/248 (48.79%), Query Frame = 2 Query: 35 RNWGLKVSAPLRV-----APLEGEDXXXXXXXXXXXXXXXXXXXXXXXXFDPGAPPPFKLADIRAAIPKHCWVKDPWKSMSYXXXXXXXXXXXXXXXXXXXXXXXXPLYWAAQGTMFWALFVLGHDCGHGSFSNDPKLK*CGGASAAFFNSGFLI--MDGKITTGLIIKTMGMLRMDDPGTRLAEKIYRTLDRGDRFFEIQNPFSPAWNSPFYFWGRSRGKMGFHFGPPRGAWLVRGKEKEGITQILW 757 RNW L V+ PL V P+E E FDPGAPPPF LADIRAAIPKHCWVK+PWKSMSY PLYW AQGTMFWALFVLGHDCGHGSFSNDP+L +S L+ +I+ + G + D+ ++EKIY++LD+ RFF P PFY W RS GK G H+ P +L + + + W Sbjct: 17 RNWALNVTTPLTVDSSSSPPIEEEPKTQR--------------------FDPGAPPPFNLADIRAAIPKHCWVKNPWKSMSYVVRELAIVFALAAGAAYLNNWLVWPLYWIAQGTMFWALFVLGHDCGHGSFSNDPRL---NSVVGHLLHSSILVPYHGWRISHRTHHQNHGHVENDESWHPMSEKIYKSLDKPTRFFRFTLPL-VMLAYPFYLWARSPGKKGSHYHPDSDLFLPKERNDVLTSTACW 240
BLAST of EY710771 vs. ExPASy Swiss-Prot
Match: FAD3C_RICCO (Omega-3 fatty acid desaturase, chloroplastic OS=Ricinus communis GN=FAD7A-1 PE=2 SV=1) HSP 1 Score: 169.474 bits (428), Expect = 2.195e-41 Identity = 95/237 (40.08%), Postives = 120/237 (50.63%), Query Frame = 2 Query: 26 SRDRNWGLKVSAPLRVAPLEGEDXXXXXXXXXXXXXXXXXXXXXXXXFDPGAPPPFKLADIRAAIPKHCWVKDPWKSMSYXXXXXXXXXXXXXXXXXXXXXXXXPLYWAAQGTMFWALFVLGHDCGHGSFSNDPKLK*CGGASAAFFNSGFLI--MDGKITTGLIIKTMGMLRMDDPGTRLAEKIYRTLDRGDRFFEIQNPFSPAWNSPFYFWGRSRGKMGFHFGPPRGAWLVRGKE 730 S+ NW L V+ P+ V+ + GED FD GAPPPF LADIRAAIPKHCWVK+PW+SMSY PLYW QGTMFWALFVLGHDCGHGSFSN+PKL +S L+ +I+ + G + D+ L+EKI+++LD + PF P PFY W RS GK G HF P G ++ + ++ Sbjct: 59 SKQSNWALNVAVPVNVSTVSGEDDREREEFNGIVNVDEGKGEF----FDAGAPPPFTLADIRAAIPKHCWVKNPWRSMSYVLRDVVVVFGLAAVAAYFNNWVAWPLYWFCQGTMFWALFVLGHDCGHGSFSNNPKL---NSVVGHLLHSSILVPYHGWRISHRTHHQNHGHVENDESWHPLSEKIFKSLDNVTKTLRFSLPF-PMLAYPFYLWSRSPGKKGSHFHPDSGLFVPKERK 287
BLAST of EY710771 vs. ExPASy Swiss-Prot
Match: FAD3E_PHAAU (Omega-3 fatty acid desaturase, endoplasmic reticulum OS=Phaseolus aureus GN=ARG1 PE=2 SV=1) HSP 1 Score: 151.369 bits (381), Expect = 6.185e-36 Identity = 88/202 (43.56%), Postives = 106/202 (52.48%), Query Frame = 2 Query: 167 FDPGAPPPFKLADIRAAIPKHCWVKDPWKSMSYXXXXXXXXXXXXXXXXXXXXXXXXPLYWAAQGTMFWALFVLGHDCGHGSFSNDPKLK*CGGASAAFFNSGFLI--MDGKITTGLIIKTMGMLRMDDPGTRLAEKIYRTLDRGDRFFEIQNPFSPAWNSPFYFWGRSRGKMGFHFGPPRGAWLVRGKEKEGI--TQILWG 760 FDPGAPPPFK+ADIRAAIPKHCW K +S+SY PLYW AQGTMFWALFVLGHDCGHGSFSN KL G +S L+ +I+ + G + D+ L EK+Y+ LD R PF P + PFY W RS GK G HF P L E++G+ + + WG Sbjct: 22 FDPGAPPPFKIADIRAAIPKHCWEKSTLRSLSYVLRDVLVVTALAASAISFNSWFFWPLYWPAQGTMFWALFVLGHDCGHGSFSNSSKLNSFVG---HILHSLILVPYNGWRISHRTHHQNHGHVEKDESWVPLTEKVYKNLDDMTRMLRYSFPF-PIFAYPFYLWNRSPGKEGSHFNPYSN--LFSPGERKGVVTSTLCWG 217
BLAST of EY710771 vs. ExPASy Swiss-Prot
Match: FAD3E_SOYBN (Omega-3 fatty acid desaturase, endoplasmic reticulum OS=Glycine max GN=FAD3 PE=2 SV=1) HSP 1 Score: 140.198 bits (352), Expect = 1.426e-32 Identity = 79/199 (39.70%), Postives = 102/199 (51.26%), Query Frame = 2 Query: 167 FDPGAPPPFKLADIRAAIPKHCWVKDPWKSMSYXXXXXXXXXXXXXXXXXXXXXXXXPLYWAAQGTMFWALFVLGHDCGHGSFSNDPKLK*CGGASAAFFNSGFLI--MDGKITTGLIIKTMGMLRMDDPGTRLAEKIYRTLDRGDRFFEIQNPFSPAWNSPFYFWGRSRGKMGFHFGPPRGAWLVRGKEKEGITQILW 757 FDP APPPFK+A+IRA+IPKHCWVK+PW+S+SY +Y QGTMFWALFVLGHDCGHGSFS+ P L G +S L+ +I+ + G + D+ L EKIY+ LD R PF P + P Y + RS GK G HF P + ++ I+ + W Sbjct: 25 FDPSAPPPFKIAEIRASIPKHCWVKNPWRSLSYVLRDVLVIAALVAAAIHFDNWLLWLIYCPIQGTMFWALFVLGHDCGHGSFSDSPLLNSLVG---HILHSSILVPYHGWRISHRTHHQNHGHIEKDESWVPLTEKIYKNLDSMTRLIRFTVPF-PLFVYPIYLFSRSPGKEGSHFNPYSNLFPPSERKGIAISTLCW 219
BLAST of EY710771 vs. ExPASy Swiss-Prot
Match: FAD3E_BRANA (Omega-3 fatty acid desaturase, endoplasmic reticulum OS=Brassica napus GN=FAD3 PE=2 SV=1) HSP 1 Score: 137.117 bits (344), Expect = 1.207e-31 Identity = 76/179 (42.46%), Postives = 90/179 (50.28%), Query Frame = 2 Query: 167 FDPGAPPPFKLADIRAAIPKHCWVKDPWKSMSYXXXXXXXXXXXXXXXXXXXXXXXXPLYWAAQGTMFWALFVLGHDCGHGSFSNDPKLK*CGGASAAFFNSGFLI--MDGKITTGLIIKTMGMLRMDDPGTRLAEKIYRTLDRGDRFFEIQNPFSPAWNSPFYFWGRSRGKMGFHFGP 697 FDP A PPFK+ DIRAAIPKHCWVK P +SMSY PLYW AQGT+FWA+FVLGHDCGHGSFS+ P L +S L+ +I+ + G + D+ L EK+Y+ L R P P P Y W RS GK G HF P Sbjct: 23 FDPSAQPPFKIGDIRAAIPKHCWVKSPLRSMSYVTRDIFAVAALAMAAVYFDSWFLWPLYWVAQGTLFWAIFVLGHDCGHGSFSDIPLL---NSVVGHILHSFILVPYHGWRISHRTHHQNHGHVENDESWVPLPEKLYKNLPHSTRMLRYTVPL-PMLAYPIYLWYRSPGKEGSHFNP 197
BLAST of EY710771 vs. ExPASy Swiss-Prot
Match: FAD3E_TOBAC (Omega-3 fatty acid desaturase, endoplasmic reticulum OS=Nicotiana tabacum GN=FAD3 PE=2 SV=1) HSP 1 Score: 134.035 bits (336), Expect = 1.022e-30 Identity = 73/179 (40.78%), Postives = 91/179 (50.84%), Query Frame = 2 Query: 167 FDPGAPPPFKLADIRAAIPKHCWVKDPWKSMSYXXXXXXXXXXXXXXXXXXXXXXXXPLYWAAQGTMFWALFVLGHDCGHGSFSNDPKLK*CGGASAAFFNSGFLI--MDGKITTGLIIKTMGMLRMDDPGTRLAEKIYRTLDRGDRFFEIQNPFSPAWNSPFYFWGRSRGKMGFHFGP 697 FDP APPPF+LA+IR IPKHCWVKDP +S+SY PLYWA QGTMFWA+FVLGHDCGHGSFS+ L +S L+ +I+ + G + D+ + EK+Y + +F + PF P P Y RS GK G HF P Sbjct: 22 FDPSAPPPFRLAEIRNVIPKHCWVKDPLRSLSYVVRDVIFVATLIGIAIHLDSWLFYPLYWAIQGTMFWAIFVLGHDCGHGSFSDSQLL---NNVVGHILHSAILVPYHGWRISHKTHHQNHGNVETDESWVPMPEKLYNKVGYSTKFLRYKIPF-PLLAYPMYLMKRSPGKSGSHFNP 196 The following BLAST results are available for this feature:
BLAST of EY710771 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 11
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Sequences
The
following sequences are available for this feature:
EST sequence >EY710771 ID=EY710771; Name=EY710771; organism=Citrus sinensis; type=EST; length=856bpback to top |