EY710741

Overview
NameEY710741
Unique NameEY710741
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1061
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY710741 vs. ExPASy Swiss-Prot
Match: CHIT1_TULBA (Chitinase 1 OS=Tulipa bakeri PE=1 SV=1)

HSP 1 Score: 204.142 bits (518), Expect = 2.740e-53
Identity = 96/135 (71.11%), Postives = 111/135 (82.22%), Query Frame = 1 
Query:   49 SLTSIIKEYNLDGIDIDYEHFQADPNTFAECIGRLIKTLKKNGAISFASIAPYDDDQVQSHYLALWKSYGDLIDYVNFQFYAYAQGTSVSQFMDYFKTQSSNYKGGKVLVSFISDGSGGLAPGDGFFTACNKLKR 453
            SLT IIK+Y+LDGIDIDYEHF+ DPNTFAECIG+L+  LKKN  +SF SIAP+DD QVQSHY ALW+ YG  IDYVNFQFYAY+  TSV QF+ YF+ QSSNY GGKVLVSF +D SGGL P +GFF AC+ LK+
Sbjct:  133 SLTRIIKQYHLDGIDIDYEHFKGDPNTFAECIGQLVTRLKKNEVVSFVSIAPFDDAQVQSHYQALWEKYGHQIDYVNFQFYAYSARTSVEQFLKYFEEQSSNYHGGKVLVSFSTDSSGGLKPDNGFFRACSILKK 267

HSP 2 Score: 26.9498 bits (58), Expect = 2.740e-53
Identity = 14/30 (46.67%), Postives = 18/30 (60.00%), Query Frame = 3 
Query:  456 EGKLHGIFCFGL-LMIQRKNGFRYEKQSPS 542
            +GKLHGIF +     +   N FRYE Q+ S
Sbjct:  268 QGKLHGIFVWSADDSLMSNNVFRYEMQAQS 297
[Close]
BLAST of EY710741 vs. ExPASy Swiss-Prot
Match: CHIT2_TULBA (Chitinase 2 OS=Tulipa bakeri PE=1 SV=1)

HSP 1 Score: 201.83 bits (512), Expect = 1.123e-51
Identity = 94/135 (69.63%), Postives = 109/135 (80.74%), Query Frame = 1 
Query:   49 SLTSIIKEYNLDGIDIDYEHFQADPNTFAECIGRLIKTLKKNGAISFASIAPYDDDQVQSHYLALWKSYGDLIDYVNFQFYAYAQGTSVSQFMDYFKTQSSNYKGGKVLVSFISDGSGGLAPGDGFFTACNKLKR 453
            SLT IIK+Y+LDGIDIDYEHF+ DPNTFAECIG+L+  LKKNG +SF SIAP+DD QVQSHY ALW+ YG  IDYVNFQFY Y+   SV QF+ YF+ Q SNY GGKVLVSF +D SGGL P +GFF AC+ LK+
Sbjct:  107 SLTKIIKQYHLDGIDIDYEHFKGDPNTFAECIGQLVTRLKKNGVVSFVSIAPFDDAQVQSHYQALWEKYGHQIDYVNFQFYVYSSRMSVEQFLKYFEMQRSNYPGGKVLVSFSTDNSGGLKPRNGFFDACSILKK 241

HSP 2 Score: 23.8682 bits (50), Expect = 1.123e-51
Identity = 12/30 (40.00%), Postives = 18/30 (60.00%), Query Frame = 3 
Query:  456 EGKLHGIFCFGL-LMIQRKNGFRYEKQSPS 542
            +GKLHGIF +     +   + F+YE Q+ S
Sbjct:  242 QGKLHGIFVWSADDSLMSNDVFKYEMQAQS 271
The following BLAST results are available for this feature:
BLAST of EY710741 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
CHIT1_TULBA2.740e-5371.11Chitinase 1 OS=Tulipa bakeri PE=1 SV=1[more]
CHIT2_TULBA1.123e-5169.63Chitinase 2 OS=Tulipa bakeri PE=1 SV=1[more]
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Properties
Property NameValue
Genbank descriptionCS00-C3-701-086-F07-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY710741 ID=EY710741; Name=EY710741; organism=Citrus sinensis; type=EST; length=1061bp
TGCGGTCCGGTCCGGATTCCGGGTCGACCACGCGTCCGCGCGGTTGCTTC
ACTCACAAGTATCATCAAAGAATACAACTTGGATGGAATTGACATTGACT
ATGAACATTTCCAAGCCGATCCTAATACATTTGCTGAATGCATAGGGCGC
CTAATTAAAACTCTCAAGAAAAATGGTGCCATCTCTTTTGCTTCAATCGC
ACCATACGATGATGACCAAGTTCAGAGCCATTACTTGGCCTTGTGGAAAA
GCTACGGTGACCTTATTGATTATGTCAACTTTCAATTTTACGCGTATGCT
CAAGGAACCAGTGTGTCTCAGTTCATGGATTACTTCAAGACTCAGAGCTC
CAATTACAAAGGCGGAAAGGTCTTGGTGAGCTTTATTAGTGACGGGAGTG
GCGGTCTGGCTCCAGGTGATGGATTCTTCACTGCTTGCAACAAGCTCAAG
AGGGGGAAGGCAAACTCCACGGTATTTTTTGTTTTGGTCTGCTGATGATT
CAAAGAAAAAATGGCTTCCGCTATGAGAAACAATCACCAAGCACTTTTTG
GCTGCTGCTACATAGTAACATCCTTCTTAAACATATATATATTGGAACCT
GTGGATGAGCTCTGTGAAATGGGTACTTCCCTAAAAGGAATTGGAAAATA
GGGGGTGGGTTTAAACGTACTTTTCTTGGGTTTTAAAATAAAGTAAAAAA
ATAAATGATACCGGTTGATTTTATAAAAAAAAAAAAAAATAAAAAAGGGG
GAGGCCGCTCTTAAAAGATATCAAAATTAACGGCATCCGGGGAGGGGCAC
TTCCAAAAGATCTTCTAATAAAGGAGAACTAAGAAATGAAATGCTCGGAG
CCGTACATTTTAAACTAACCGTGCAGGAAGGGGGAAAAAACCGCGTGTGT
GGACCCCGACAGTGAATCACCTGGCATTTGGAAGTCGAATGCTTTACGTT
TAAAACCAGACTAGGTGGAATAAATATGGAAAATATGAACGCATATCTCG
TTTCATTTACATATCCCATTACACCCTAAACTGCGTTGAAGCTGCCATTG
CATGCTATATG
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