EY685936

Overview
NameEY685936
Unique NameEY685936
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1017
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY685936 vs. ExPASy Swiss-Prot
Match: AB11G_ARATH (ABC transporter G family member 11 OS=Arabidopsis thaliana GN=ABCG11 PE=1 SV=1)

HSP 1 Score: 150.984 bits (380), Expect = 1.043e-35
Identity = 77/133 (57.89%), Postives = 99/133 (74.44%), Query Frame = 3
Query:    3 LTWQDLPVTVPDGQKKGNRSILQGLTGYARPGELLAIMGPSGCGKSTLLDALAGRLGSNTRQAGEILINGRKRALAYGTSAYVTQDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLPDGA 401
            LTWQDL V V  G  +  +++L+GLTGYA PG L A+MGPSG GKST+LDALA RL +N   +G +L+NGRK  L++GT+AYVTQDD LI TLTV E ++YSA+++LPD M + +K+   E TI EMGL D A
Sbjct:   50 LTWQDLTVMVTMGDGE-TQNVLEGLTGYAEPGSLTALMGPSGSGKSTMLDALASRLAANAFLSGTVLLNGRKTKLSFGTAAYVTQDDNLIGTLTVRETIWYSARVRLPDKMLRSEKRALVERTIIEMGLQDCA 181          
BLAST of EY685936 vs. ExPASy Swiss-Prot
Match: AB15G_ARATH (ABC transporter G family member 15 OS=Arabidopsis thaliana GN=ABCG15 PE=2 SV=2)

HSP 1 Score: 142.124 bits (357), Expect = 4.843e-33
Identity = 81/175 (46.29%), Postives = 104/175 (59.43%), Query Frame = 3
Query:    3 LTWQDLPVTVPDGQKKGNRSILQGLTGYARPGELLAIMGPSGCGKSTLLDALAGRLGSNTRQAGEILINGRKRALAYGTSAYVTQDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLPD------GAWIGE-LPAGELKALLVINNSTLEFCL*MMTRPSPLF 506
            L W+DL V +P+      R +LQ L GYA PG ++AIMGPSG GKSTLLD+LAGRL  N    G +L+NG+K  L YG  AYVTQ+D L+ TLTV E + YSA L+LP  M+K +  +  E TI E+GL D      G W    +  GE K + +         L ++TRP  LF
Sbjct:   25 LAWEDLTVVIPNFSDGPTRRLLQRLNGYAEPGRIMAIMGPSGSGKSTLLDSLAGRLARNVVMTGNLLLNGKKARLDYGLVAYVTQEDVLLGTLTVRETITYSAHLRLPSDMSKEEVSDIVEGTIMELGLQDCSDRVIGNWHARGVSGGERKRVSI--------ALEILTRPQILF 191          
BLAST of EY685936 vs. ExPASy Swiss-Prot
Match: AB13G_ARATH (ABC transporter G family member 13 OS=Arabidopsis thaliana GN=ABCG13 PE=2 SV=1)

HSP 1 Score: 140.198 bits (352), Expect = 1.840e-32
Identity = 76/175 (43.43%), Postives = 109/175 (62.29%), Query Frame = 3
Query:    3 LTWQDLPVTVPDGQKKGNRSILQGLTGYARPGELLAIMGPSGCGKSTLLDALAGRLGSNTRQAGEILINGRKRALAYGTSAYVTQDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLPD------GAW-IGELPAGELKALLVINNSTLEFCL*MMTRPSPLF 506
            + W+DL V +P+  +   + +L G+ G   P  +LAIMGPSG GKSTLLDALAGRL  N   +G++L+NG+KR L +G +AYVTQ+D L+ TLTV E++ YSA L+LP  +T+ +  +  E TI +MGL +      G W +  +  GE K L +         L ++T+PS LF
Sbjct:   10 VAWEDLTVVIPNFGEGATKRLLNGVNGCGEPNRILAIMGPSGSGKSTLLDALAGRLAGNVVMSGKVLVNGKKRRLDFGAAAYVTQEDVLLGTLTVRESISYSAHLRLPSKLTREEISDIVEATITDMGLEECSDRTIGNWHLRGISGGEKKRLSI--------ALEVLTKPSLLF 176          
BLAST of EY685936 vs. ExPASy Swiss-Prot
Match: AB12G_ARATH (ABC transporter G family member 12 OS=Arabidopsis thaliana GN=ABCG12 PE=1 SV=1)

HSP 1 Score: 137.117 bits (344), Expect = 1.558e-31
Identity = 80/175 (45.71%), Postives = 103/175 (58.86%), Query Frame = 3
Query:    3 LTWQDLPVTVPDGQKKGNRSILQGLTGYARPGELLAIMGPSGCGKSTLLDALAGRLGSNTRQAGEILINGRKRALAYGTSAYVTQDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLPD------GAWIGE-LPAGELKALLVINNSTLEFCL*MMTRPSPLF 506
            L W+DL V +P+      R +L GL G+A PG ++AIMGPSG GKSTLLD+LAGRL  N    G +L+NG+K  L YG  AYVTQ+D L+ TLTV E + YSA L+L   +TK +  +  E TI E+GL D      G W    +  GE K + V         L ++TRP  LF
Sbjct:   24 LAWEDLTVVIPNFSGGPTRRLLDGLNGHAEPGRIMAIMGPSGSGKSTLLDSLAGRLARNVIMTGNLLLNGKKARLDYGLVAYVTQEDILMGTLTVRETITYSAHLRLSSDLTKEEVNDIVEGTIIELGLQDCADRVIGNWHSRGVSGGERKRVSV--------ALEILTRPQILF 190          
BLAST of EY685936 vs. ExPASy Swiss-Prot
Match: AB3G_ARATH (ABC transporter G family member 3 OS=Arabidopsis thaliana GN=ABCG3 PE=1 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 8.569e-22
Identity = 58/133 (43.61%), Postives = 83/133 (62.41%), Query Frame = 3
Query:    3 LTWQDLPVTVPDGQKKGNRSILQGLTGYARPGELLAIMGPSGCGKSTLLDALAGRLGSNTRQAGEILINGRKRALAYGTSAYVTQDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLPDGA 401
            + W+DL VT+  G++K +  +++   GYA PG +  IMGP+  GKSTLL ALAGRL  + +  GE+ +NG K  + YG+  +V ++  LI +LTV E +YYSA LQLP  +   QK+   E  I+ M L D A
Sbjct:  114 IAWKDLTVTMK-GKRKYSDKVVKSSNGYAFPGTMTVIMGPAKSGKSTLLRALAGRLPPSAKMYGEVFVNGSKSHMPYGSYGFVERETQLIGSLTVREFLYYSALLQLPGFL--FQKRSVVEDAIQAMSLSDYA 243          
BLAST of EY685936 vs. ExPASy Swiss-Prot
Match: AB27G_ARATH (ABC transporter G family member 27 OS=Arabidopsis thaliana GN=ABCG27 PE=2 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 2.111e-20
Identity = 65/168 (38.69%), Postives = 93/168 (55.36%), Query Frame = 3
Query:   24 VTVPDGQKKGNRSILQGLTGYARPGELLAIMGPSGCGKSTLLDALAGRLGSNTRQAGEILINGRKRALAYGTS-AYVTQDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLP-------DGAWIGELPAGELKALLVINNSTLEFCL*MMTRPSPL 503
            VT         +SIL G++G A PGELLA+MGPSG GK+TLL+AL GR  +     G +  N +  +    T   +VTQDD L   LTV E + Y+A L+LP T+T+ +K++RA   I+E+GL         G+++  +  GE K + + N         +MT PS L
Sbjct:  154 VTTKGMTSSSEKSILNGISGSAYPGELLALMGPSGSGKTTLLNALGGRF-NQQNIGGSVSYNDKPYSKHLKTRIGFVTQDDVLFPHLTVKETLTYTALLRLPKTLTEQEKEQRAASVIQELGLERCQDTMIGGSFVRGVSGGERKRVCIGNE--------IMTNPSLL 312          
BLAST of EY685936 vs. ExPASy Swiss-Prot
Match: AB22G_ARATH (ABC transporter G family member 22 OS=Arabidopsis thaliana GN=ABCG22 PE=1 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 2.111e-20
Identity = 60/155 (38.71%), Postives = 91/155 (58.71%), Query Frame = 3
Query:   57 RSILQGLTGYARPGELLAIMGPSGCGKSTLLDALAGRLGSNTRQAGEILINGRKRALAYGTS-AYVTQDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLP-------DGAWIGELPAGELKALLVINNSTLEFCL*MMTRPS 497
            + IL G++G   PGE+LA+MGPSG GK+TLL  LAGR+ S +   G +  N +  +    +   +VTQDD L   LTV E + Y+A+L+LP T+T+ QKK+RA   I+E+GL         GA++  +  GE K + + N   +   L ++  P+
Sbjct:  177 KEILTGISGSVNPGEVLALMGPSGSGKTTLLSLLAGRI-SQSSTGGSVTYNDKPYSKYLKSKIGFVTQDDVLFPHLTVKETLTYAARLRLPKTLTREQKKQRALDVIQELGLERCQDTMIGGAFVRGVSGGERKRVSIGNEIIINPSLLLLDEPT 330          
BLAST of EY685936 vs. ExPASy Swiss-Prot
Match: AB9G_ARATH (ABC transporter G family member 9 OS=Arabidopsis thaliana GN=ABCG9 PE=2 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 3.048e-19
Identity = 52/117 (44.44%), Postives = 79/117 (67.52%), Query Frame = 3
Query:   45 KKGNRSILQGLTGYARPGELLAIMGPSGCGKSTLLDALAGRLGSNT-RQAGEILINGRKRALAY-GTSAYVTQDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGL 389
            K   R+IL+GLTG  +PGE+LA++GPSG GK++LL AL GR+G    +  G I  N +  + A   T+ +VTQDDAL   LTV+E + ++A L+LP++  K +K ++A+  + E+GL
Sbjct:   60 KTEERTILKGLTGIVKPGEILAMLGPSGSGKTSLLTALGGRVGEGKGKLTGNISYNNKPLSKAVKRTTGFVTQDDALYPNLTVTETLVFTALLRLPNSFKKQEKIKQAKAVMTELGL 176          
BLAST of EY685936 vs. ExPASy Swiss-Prot
Match: AB26G_ARATH (ABC transporter G family member 26 OS=Arabidopsis thaliana GN=ABCG26 PE=3 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 5.199e-19
Identity = 57/124 (45.97%), Postives = 77/124 (62.10%), Query Frame = 3
Query:   33 PDGQKKGNRSILQGLTGYARPGELLAIMGPSGCGKSTLLDALAGRLGSNTRQAGEILINGRKRALAYGTS-----AYVTQDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGL 389
            PDG K     IL+G+TG   PGE+LA+MGPSG GK+TLL  + GRL  N +  G++  N     + Y  S      +VTQDD L+  LTV E + ++A L+LP +M+K QK  + EM IKE+GL
Sbjct:  100 PDGYKH----ILKGITGSTGPGEILALMGPSGSGKTTLLKIMGGRLTDNVK--GKLTYND----IPYSPSVKRRIGFVTQDDVLLPQLTVEETLAFAAFLRLPSSMSKEQKYAKIEMIIKELGL 213          
BLAST of EY685936 vs. ExPASy Swiss-Prot
Match: ABCGM_DICDI (ABC transporter G family member 22 OS=Dictyostelium discoideum GN=abcG22 PE=2 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 6.790e-19
Identity = 60/145 (41.38%), Postives = 88/145 (60.69%), Query Frame = 3
Query:    3 LTWQDLPVTVPDGQKKGNRSILQGLTGYARPGELLAIMGPSGCGKSTLLDALAGRLGSNTRQAGEILINGRKRALAY-GTSAYVTQDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGL---PDGAWIGELPAG 425
            +T++DL  +V   +KK    IL+G++G   PGEL+A+ GPSG GK+TLLD LA R  S    +G +LING +    Y    +YV Q+D L+ T+TV E + + A L+LP + T+ +K ER E  ++++GL    D    G LP G
Sbjct:   31 ITFKDLAYSVTVKKKK--MQILKGVSGTVTPGELVAVFGPSGSGKTTLLDILANRKESG-EISGAVLINGNEIDDDYKRLCSYVVQEDVLLPTITVRETLRFYADLKLPKSWTEKEKHERIEQILEQIGLSHRADAKIGGVLPGG 172          
The following BLAST results are available for this feature:
BLAST of EY685936 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 101
Match NameE-valueIdentityDescription
AB11G_ARATH1.043e-3557.89ABC transporter G family member 11 OS=Arabidopsis ... [more]
AB15G_ARATH4.843e-3346.29ABC transporter G family member 15 OS=Arabidopsis ... [more]
AB13G_ARATH1.840e-3243.43ABC transporter G family member 13 OS=Arabidopsis ... [more]
AB12G_ARATH1.558e-3145.71ABC transporter G family member 12 OS=Arabidopsis ... [more]
AB3G_ARATH8.569e-2243.61ABC transporter G family member 3 OS=Arabidopsis t... [more]
AB27G_ARATH2.111e-2038.69ABC transporter G family member 27 OS=Arabidopsis ... [more]
AB22G_ARATH2.111e-2038.71ABC transporter G family member 22 OS=Arabidopsis ... [more]
AB9G_ARATH3.048e-1944.44ABC transporter G family member 9 OS=Arabidopsis t... [more]
AB26G_ARATH5.199e-1945.97ABC transporter G family member 26 OS=Arabidopsis ... [more]
ABCGM_DICDI6.790e-1941.38ABC transporter G family member 22 OS=Dictyosteliu... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C2-003-029-D06-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY685936 ID=EY685936; Name=EY685936; organism=Citrus sinensis; type=EST; length=1017bp
TCTTAACTTGGCAAGATCTGCCGGTTACGGTTCCCGATGGTCAGAAAAAA
GGCAACAGATCAATCCTTCAAGGTCTTACTGGCTACGCAAGACCTGGGGA
GCTTTTGGCTATTATGGGTCCTTCTGGTTGTGGAAAATCTACTCTTCTTG
ATGCTTTAGCTGGAAGACTAGGATCGAACACAAGGCAAGCAGGAGAAATT
CTAATTAATGGGCGCAAACGGGCACTGGCTTATGGAACCTCGGCATATGT
GACACAAGATGACGCTTTGATCACTACACTGACGGTTAGTGAAGCAGTGT
ACTACTCAGCTCAGCTGCAATTGCCGGACACGATGACCAAATTACAGAAG
AAAGAAAGAGCAGAAATGACAATAAAAGAAATGGGGCTCCCAGATGGCGC
GTGGATAGGAGAATTGCCCGCTGGGGAGCTAAAGGCCTTACTGGTGATCA
ACAACAGCACATTAGAATTTTGCCTTTGAATGATGACTCGACCATCACCT
CTATTTCCATGACCACCCACAGGCGGCAAGTATACAGGAACATACCACAA
CGAAAAGAACAAAAAACATACACGGAATCCCAGCAGGCAAGGAACCCGCA
CGCACGCACGAAAAACACCCGTCAGTCTACGGGCCACCAAAGCCAGTCCA
GCCAACAGCGCAACGACCCCCCACCCCGCCACGCCCGTCGCGACAGAGCA
CACGATCACGCACCCCGGACGGAGACCCCCGCCCGGAACTGCAGATGTCA
ACGTGAGAAACACGGCAAGCAACAACAGAAACGTCTCCGCGCTCACTAAC
ACCGCCCCCAACCACCACACCCACCAGCCCACGCGAACCCACACACCACC
CACCCCCCCCACCCCACTCGGTACCGCCCCCCGACCCACCCTCCCCTCTA
ACAACACCCCGAGCGAAACCCCTCACAACACCAAACACAGCACGGCACAC
GACACAGACGGAGCAACACCAAAACAAGATCACACGAACCATACAGAGAG
GAGACACCGGCANAGGA
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