EY710647

Overview
NameEY710647
Unique NameEY710647
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length945
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY710647 vs. ExPASy Swiss-Prot
Match: PME3_CITSI (Pectinesterase 3 OS=Citrus sinensis PE=1 SV=1)

HSP 1 Score: 213.386 bits (542), Expect = 1.538e-54
Identity = 121/175 (69.14%), Postives = 125/175 (71.43%), Query Frame = 2
Query:    2 NQNISNIPXXXXXXXXXXXXXXXXXXXXXXXXXXXNSRKNSGDNGNEPHHAILKSSCSSTRYPDLCFSAIAAVPEASKKVTSQKDVIEMSLDITTTAVEHNYFGIQKLLKRTNLTKREKVALHDCLENIDETPWMSYTKPSRILEEYPNKKSFITAWGMNSKPLMDGREWTNQGT 526
            NQNISNIP                           NSRKNSGDNGNEPHHAILKSSCSSTRYPDLCFSAIAAVPEASKKVTSQKDVIEMSL+ITTTAVEHNYFGIQKLLKRTNLTKREKVALHDCLE IDET      K    LEEYPNKKS ++    + K LM     TNQGT
Sbjct:   17 NQNISNIPKKKKKLFLALFATLLVVAAVIGIVAGVNSRKNSGDNGNEPHHAILKSSCSSTRYPDLCFSAIAAVPEASKKVTSQKDVIEMSLNITTTAVEHNYFGIQKLLKRTNLTKREKVALHDCLETIDET-LDELHKAVEDLEEYPNKKS-LSQHADDLKTLMSA-AMTNQGT 188          
BLAST of EY710647 vs. ExPASy Swiss-Prot
Match: PME1_CITSI (Pectinesterase 1 OS=Citrus sinensis GN=PECS-1.1 PE=2 SV=1)

HSP 1 Score: 213.386 bits (542), Expect = 1.538e-54
Identity = 121/175 (69.14%), Postives = 125/175 (71.43%), Query Frame = 2
Query:    2 NQNISNIPXXXXXXXXXXXXXXXXXXXXXXXXXXXNSRKNSGDNGNEPHHAILKSSCSSTRYPDLCFSAIAAVPEASKKVTSQKDVIEMSLDITTTAVEHNYFGIQKLLKRTNLTKREKVALHDCLENIDETPWMSYTKPSRILEEYPNKKSFITAWGMNSKPLMDGREWTNQGT 526
            NQNISNIP                           NSRKNSGDNGNEPHHAILKSSCSSTRYPDLCFSAIAAVPEASKKVTSQKDVIEMSL+ITTTAVEHNYFGIQKLLKRTNLTKREKVALHDCLE IDET      K    LEEYPNKKS ++    + K LM     TNQGT
Sbjct:   17 NQNISNIPKKKKKLFLALFATLLVVAAVIGIVAGVNSRKNSGDNGNEPHHAILKSSCSSTRYPDLCFSAIAAVPEASKKVTSQKDVIEMSLNITTTAVEHNYFGIQKLLKRTNLTKREKVALHDCLETIDET-LDELHKAVEDLEEYPNKKS-LSQHADDLKTLMSA-AMTNQGT 188          
BLAST of EY710647 vs. ExPASy Swiss-Prot
Match: PMEU1_SOLLC (Pectinesterase/pectinesterase inhibitor U1 OS=Solanum lycopersicum GN=PMEU1 PE=2 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 3.949e-26
Identity = 67/120 (55.83%), Postives = 85/120 (70.83%), Query Frame = 2
Query:  116 KNSGDNGN-----EPHHAILKSSCSSTRYPDLCFSAIAAVPEASKKVTSQKDVIEMSLDITTTAVEHNYFGIQKLLK-RTNLTKREKVALHDCLENIDETPWMSYTKPSRILEEYPNKKS 457
            KNS D+ +        HAI+KS+CS+T +P+LC+SAI  V + SKKVTSQKDVIE+SL+IT  AV  NY+ +++L+K R  LT REKVALHDCLE +DET    +T     LE YPNKKS
Sbjct:   47 KNSDDHADIMAISSSAHAIVKSACSNTLHPELCYSAIVNVSDFSKKVTSQKDVIELSLNITVKAVRRNYYAVKELIKTRKGLTPREKVALHDCLETMDETLDELHTAVED-LELYPNKKS 165          
BLAST of EY710647 vs. ExPASy Swiss-Prot
Match: PME2_ARATH (Pectinesterase 2 OS=Arabidopsis thaliana GN=PME2 PE=2 SV=2)

HSP 1 Score: 111.694 bits (278), Expect = 6.304e-24
Identity = 68/127 (53.54%), Postives = 85/127 (66.93%), Query Frame = 2
Query:  149 HAILKSSCSSTRYPDLCFSAIAAVPEASKKVTSQKDVIEMSLDITTTAVEHNYFGIQKLL-KRTNLTKREKVALHDCLENIDETPWMSYTKPSRILEEYPNKKSFITAWGMNSKPLMDGREWTNQGT 526
            HAILKS CSST YP+LCFSA+AA     K++TSQK+VIE SL++TT AV+HNYF ++KL+ KR  LT RE  ALHDCLE IDET    +      L +YP +KS +     + K L+     TNQGT
Sbjct:   59 HAILKSVCSSTLYPELCFSAVAAT--GGKELTSQKEVIEASLNLTTKAVKHNYFAVKKLIAKRKGLTPREVTALHDCLETIDETLDELHVAVED-LHQYPKQKS-LRKHADDLKTLISS-AITNQGT 180          
BLAST of EY710647 vs. ExPASy Swiss-Prot
Match: PME3_ARATH (Pectinesterase/pectinesterase inhibitor 3 OS=Arabidopsis thaliana GN=PME3 PE=2 SV=2)

HSP 1 Score: 110.153 bits (274), Expect = 1.834e-23
Identity = 62/117 (52.99%), Postives = 78/117 (66.67%), Query Frame = 2
Query:  110 SRKNSGDNGNEPHHAILKSSCSSTRYPDLCFSAIAAVPEASKKVTSQKDVIEMSLDITTTAVEHNYFGIQKLL-KRTNLTKREKVALHDCLENIDETPWMSYTKPSRILEEYPNKKS 457
            S+ N     +   HA+L+SSCSSTRYP+LC SA+  V     ++TSQKDVIE S+++T TAVEHNYF ++KL+ KR  LT REK ALHDCLE IDET      +    L  YP KK+
Sbjct:   43 SKANEKRTLSPSSHAVLRSSCSSTRYPELCISAV--VTAGGVELTSQKDVIEASVNLTITAVEHNYFTVKKLIKKRKGLTPREKTALHDCLETIDET-LDELHETVEDLHLYPTKKT 156          
The following BLAST results are available for this feature:
BLAST of EY710647 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 5
Match NameE-valueIdentityDescription
PME3_CITSI1.538e-5469.14Pectinesterase 3 OS=Citrus sinensis PE=1 SV=1[more]
PME1_CITSI1.538e-5469.14Pectinesterase 1 OS=Citrus sinensis GN=PECS-1.1 PE... [more]
PMEU1_SOLLC3.949e-2655.83Pectinesterase/pectinesterase inhibitor U1 OS=Sola... [more]
PME2_ARATH6.304e-2453.54Pectinesterase 2 OS=Arabidopsis thaliana GN=PME2 P... [more]
PME3_ARATH1.834e-2352.99Pectinesterase/pectinesterase inhibitor 3 OS=Arabi... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C3-701-083-F01-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY710647 ID=EY710647; Name=EY710647; organism=Citrus sinensis; type=EST; length=945bp
CAACCAAAACATTTCCAATATTCCCAAGAAAAAAAAGAAACTATTCTTAG
CTCTTTTTGCAACGCTACTCGTTGTTGCTGCCGTAATCGGCATTGTCGCC
GGAGTGAACTCAAGAAAAAACTCCGGCGACAACGGCAACGAGCCTCATCA
TGCTATCCTCAAATCATCATGCAGCAGCACAAGGTACCCGGACTTATGCT
TTTCGGCTATTGCTGCCGTTCCAGAGGCCTCCAAAAAGGTGACAAGCCAA
AAGGACGTTATTGAGATGTCCTTAGATATCACAACAACAGCCGTGGAACA
CAACTACTTCGGGATTCAGAAGCTCTTGAAGAGAACGAATCTCACCAAAC
GGGAAAAGGTTGCTCTCCATGACTGTCTTGAGAACATCGATGAGACTCCT
TGGATGAGTTACACAAAGCCGTCGAGGATCTTGGAGGAATACCCGAACAA
GAAATCCTTTATCACAGCCTGGGGAATGAACTCAAAACCCTTAATGGATG
GCCGGGAATGGACCAATCAGGGGACGTGGTCTTGAGGGGTTCTCCCAAGG
ATGATGCTAAATAAGCCCGGTGGCGGGGATGGGCGTTGTCCAAAAAGGGC
CAGGGTTTCAGTGTTGAAAAAAAATGGGAACCAAGGGGCCTTTGGATAGA
ATAAAAAAACTTGAAGGAAACTTGGACTTGAATGGATTTTGAGGGACCTT
CTCAACATCCAGGGAACCGGACCGGAGAGAAAAAACCTTTTCGGGTTAAA
TGGGGGGGGCCCCGAGAGAGGGACATTACCCCCCACGAGAAAAAAAAAAA
AGCGTATTTACGCAAATACCGCAGCAGCGGGGGGGACCACAGCGGAACGC
CGCGGGGAGGAGGGAGGCGTGGAGGAGGAGAGGGGCAGGAAGAAGAAAAG
ATCTTATTTAAAGAAAAAGGGGAAGGGGTGGGGGACGTGAGAGAA
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