EY710646

Overview
NameEY710646
Unique NameEY710646
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1015
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY710646 vs. ExPASy Swiss-Prot
Match: Y4115_ARATH (Uncharacterized protein At4g01150, chloroplastic OS=Arabidopsis thaliana GN=At4g01150 PE=1 SV=1)

HSP 1 Score: 139.428 bits (350), Expect = 6.649e-33
Identity = 80/153 (52.29%), Postives = 102/153 (66.67%), Query Frame = 2 
Query:    5 VSMAATAYAAVLTPRVPSTTTVKVKSSHCFALPCLXXXXXXXXXXXX-IKQVSES--RRFPLLQVRASSSEETSTVDADELFSDLKEKWDAIENKSTVLLYGGGAIVAVWLSSTIVGAINSVXXXXXXXXXXXXXYTGWFVYRYLLFKSSKKK 454
            +S+AA++  AV+ PRVP+ +T       C A+P L             +K VS +  ++  LL+ RASS EETS++D +EL +DLKEKWD +ENKSTVL+YGGGAIVAVWLSS +VGAINSV             YTGWFVYRYLLFKSS+K+
Sbjct:    3 ISVAASSSMAVMVPRVPAVST------RCSAVPYLPPRSFGRSSFTVPLKLVSGNGLQKVELLKTRASS-EETSSIDTNELITDLKEKWDGLENKSTVLIYGGGAIVAVWLSSIVVGAINSVPLLPKVMELVGLGYTGWFVYRYLLFKSSRKE 148

HSP 2 Score: 23.483 bits (49), Expect = 6.649e-33
Identity = 11/20 (55.00%), Postives = 17/20 (85.00%), Query Frame = 1 
Query:  448 KKKLATDIETIKKEKLLGTE 507
            +K+LA DIE++KK K+ G+E
Sbjct:  146 RKELAEDIESLKK-KIAGSE 164
The following BLAST results are available for this feature:
BLAST of EY710646 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
Y4115_ARATH6.649e-3352.29Uncharacterized protein At4g01150, chloroplastic O... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C3-701-083-E12-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY710646 ID=EY710646; Name=EY710646; organism=Citrus sinensis; type=EST; length=1015bp
CAAAGTATCAATGGCAGCGACCGCGTACGCGGCGGTGTTAACTCCACGTG
TCCCCTCAACCACCACCGTCAAAGTCAAATCTTCTCACTGCTTTGCTCTT
CCCTGCCTCCCTCCTCGTTCGTCAACGCCACCATTCTCTTCTTCCATTAA
ACAAGTTTCAGAGTCGAGAAGGTTTCCTTTGCTTCAGGTTAGAGCCTCTT
CCTCAGAAGAGACATCCACAGTTGATGCAGATGAACTTTTTTCAGACTTG
AAGGAAAAGTGGGATGCCATTGAAAACAAGTCCACGGTACTTCTCTATGG
AGGTGGGGCAATAGTGGCTGTTTGGTTATCCTCAACTATTGTTGGTGCCA
TCAATTCAGTGCCTTTGCTTCCCAAACTCTTGGAGTTGATTGGACTTGGT
TATACTGGATGGTTTGTCTACAGATACCTTCTCTTCAAGTCAAGCAAAAA
AAAAAACTAGCCACGGATATTGAAACAATAAAAAAAGAAAAATTGCTAGG
AACTGAATAAATTGGAAATTCAGGGAAGGAAATTCAAGTATTGGTCCCTG
AAAAGAAATTTAATTATGGCAGCAAACAATAAAGAATAAAAAACATTGAA
AAAAGAAAGACAAAGAAAACGAAAAGAATCCATTACAATAACAGGGAAAA
CAAGGAAAGAAAGGAGAAAGACAGGATAGGCAAAACTAAGGAAGAAAAGA
AAAAAGAGAGGAAAAAAAAAGAAGAAAAAGAAAACAAAGAAGCAAAGGAC
GAAAAGAGGAAGAGAAAAAAAAAAAAAAAAGAAAAAGAAAAAAAAGAAAG
GACAAGAAGGCGGAATAACAAACGACAAAGCGGAAAACACCGAGGAAAGA
TAGAACCCAAAAATCCGCGCACCGAAACCAACAAAAGCAACCGGATCAAC
GCAAAAACAAAAAAAGGCAAAACAAAAACAAACGAGAACAAAAGAAACAC
GGAAGCTGAAAGGAGACAAACAAAACAAACAATAAAAAAGCAAGGACAAA
AAGAAGAAAAAAGAC
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