EY710636

Overview
NameEY710636
Unique NameEY710636
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1119
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY710636 vs. ExPASy Swiss-Prot
Match: CAO_ARATH (Chlorophyllide a oxygenase, chloroplastic OS=Arabidopsis thaliana GN=CAO PE=1 SV=1)

HSP 1 Score: 250.366 bits (638), Expect = 1.452e-65
Identity = 117/141 (82.98%), Postives = 129/141 (91.49%), Query Frame = 1
Query:    1 NLLDLAHAPFTHTSTFAKGWSVPSLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVLNEGSTNLVLGPARNEMN 423
            NLLDLAHAPFTHTSTFAKGWSVPSLVKFLTP SGLQGYWDPYPIDMEF+PPC+VLSTIGISKPGKLEG++T+QCATHLHQLHVCLPSS+ KTRLLYRMSLDFA +LK++PFM++LWRHFAEQVLNE    LVLG     +N
Sbjct:  361 NLLDLAHAPFTHTSTFAKGWSVPSLVKFLTPTSGLQGYWDPYPIDMEFKPPCIVLSTIGISKPGKLEGKSTQQCATHLHQLHVCLPSSKNKTRLLYRMSLDFAPILKNLPFMEHLWRHFAEQVLNE-DLRLVLGQQERMLN 500          
BLAST of EY710636 vs. ExPASy Swiss-Prot
Match: CAO_ORYSJ (Chlorophyllide a oxygenase, chloroplastic OS=Oryza sativa subsp. japonica GN=CAO PE=2 SV=1)

HSP 1 Score: 249.21 bits (635), Expect = 3.234e-65
Identity = 124/172 (72.09%), Postives = 140/172 (81.40%), Query Frame = 1
Query:    1 NLLDLAHAPFTHTSTFAKGWSVPSLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVLNEGSTNLVLGPARNEMNNGGKMSGNFAWRLRQTKGGRYKVMGKTALEK 516
            NLLDLAHAPFTHTSTFAKGWSVPSLVKFLTP+SGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEG++T+QC+THLHQLH+CLPSSR KTRLLYRMSLDFA  +KHVPFM  LW HFAE+VLNE    LVLG  +  M NG  +   + W +   K G    + + A+E+
Sbjct:  360 NLLDLAHAPFTHTSTFAKGWSVPSLVKFLTPSSGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEGKSTKQCSTHLHQLHICLPSSRNKTRLLYRMSLDFAPWIKHVPFMHILWSHFAEKVLNE-DLRLVLG-QQERMINGANV---WNWPVSYDKLGIRYRLWRDAIER 526          
BLAST of EY710636 vs. ExPASy Swiss-Prot
Match: CAO_CHLRE (Chlorophyllide a oxygenase, chloroplastic OS=Chlamydomonas reinhardtii GN=CAO PE=2 SV=2)

HSP 1 Score: 178.718 bits (452), Expect = 5.368e-44
Identity = 91/166 (54.82%), Postives = 109/166 (65.66%), Query Frame = 1
Query:    1 NLLDLAHAPFTHTSTFAKGWSVPSLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKL-EGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVLNEGSTNLVLGPARNEMNNGGKMSG-----NFAWRLRQTKGG 480
            NLLDLAHAPFTHTSTFA+GW VP  VKF    + L G+WDPYPIDM F+PPCM LSTIG+++PGK+  G    QC  HLHQLHVC+PS +  TRLLYRMSLDF   ++HVPF+  +W+  A QVL E    LVLG     +  G   S        A R R+ + G
Sbjct:  447 NLLDLAHAPFTHTSTFARGWPVPDFVKFHANKA-LSGFWDPYPIDMAFQPPCMTLSTIGLAQPGKIMRGVTASQCKNHLHQLHVCMPSKKGHTRLLYRMSLDFLPWMRHVPFIDRIWKQVAAQVLGEDLV-LVLGQQDRMLRGGSNWSNPAPYDKLAVRYRRWRNG 610          
BLAST of EY710636 vs. ExPASy Swiss-Prot
Match: CAO_DUNSA (Chlorophyllide a oxygenase, chloroplastic OS=Dunaliella salina GN=CAO PE=2 SV=1)

HSP 1 Score: 166.392 bits (420), Expect = 2.757e-40
Identity = 82/135 (60.74%), Postives = 94/135 (69.63%), Query Frame = 1
Query:    1 NLLDLAHAPFTHTSTFAKGWSVPSLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKL-EGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVLNEGSTNLVLG 402
            NLLDLAHAPFTHT+TFA+GW +P  V+F      L G WDPYPI M F PPC+ LSTIG+S+PGK+  G    +C  HLHQLHVC+PS    TRLLYRMSLDF    KHVPF+  LW+  A QVL E    LVLG
Sbjct:  276 NLLDLAHAPFTHTTTFARGWPIPEAVRFHATKM-LAGDWDPYPISMSFNPPCIALSTIGLSQPGKIMRGYKAEECKRHLHQLHVCMPSKEGHTRLLYRMSLDFWGWAKHVPFVDVLWKKIAGQVLGEDLV-LVLG 408          
The following BLAST results are available for this feature:
BLAST of EY710636 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 4
Match NameE-valueIdentityDescription
CAO_ARATH1.452e-6582.98Chlorophyllide a oxygenase, chloroplastic OS=Arabi... [more]
CAO_ORYSJ3.234e-6572.09Chlorophyllide a oxygenase, chloroplastic OS=Oryza... [more]
CAO_CHLRE5.368e-4454.82Chlorophyllide a oxygenase, chloroplastic OS=Chlam... [more]
CAO_DUNSA2.757e-4060.74Chlorophyllide a oxygenase, chloroplastic OS=Dunal... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C3-701-083-E02-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY710636 ID=EY710636; Name=EY710636; organism=Citrus sinensis; type=EST; length=1119bp
AACCTTTTGGATCTTGCACATGCTCCATTTACTCACACTTCCACGTTCGC
CAAGGGATGGAGCGTTCCCAGCTTGGTGAAATTTTTGACACCTGCATCTG
GCCTACAAGGATACTGGGACCCTTATCCAATAGATATGGAATTTCGACCA
CCATGTATGGTGCTATCAACCATTGGCATCTCAAAGCCTGGAAAACTGGA
AGGACAGAATACCAGGCAGTGCGCAACACATCTTCACCAGCTTCATGTGT
GCTTACCTTCATCAAGAAAGAAAACCAGGTTGCTATACAGAATGTCCCTG
GATTTTGCTTCTGTGCTCAAACATGTCCCATTCATGCAATACCTATGGAG
GCACTTTGCAGAACAGGTGTTGAACGAGGGATCTACCAACTTGGTTCTTG
GGCCAGCAAGAAACGAAATGAACAACGGGGGCAAAATGTCTGGAAACTTT
GCCTGGAGGTTACGACAAACTAAGGGTGGAAGGTATAAAGTTATGGGAAA
GACCGCTTTGGAAAAGAGGAACTTAACCCATTATCCCCTTTTAAGGGAAC
CAATGGAAATTTCCCCCCATTCCAACAAATAAAATTGAATCTTCTCTCCA
ATACCCCTTTGAAAAACCAAATTCCCCCTGAAATCCACAAATCACCAAAA
TGCATTTTGCAGGCAGAAATCACAAAAAAATCCTTTTTCCCATTTTTCCC
TTTTCCCAGAGAAAAAAACTGAAATTTTAGTAAACCTTGGAGTTTTTTGA
CCACTCTCGGAAGGGGAACCCCCAAAAACACGGGAAGCAGCCCCCGAAAA
AAAGCGGTACAATTTTATTAAAACAAGACAAAAAAAAAAAAAAAACCACC
ACATCACCAAAAAAAAACAAAAAAAGATAATATTAAGCAAAGAATGTTAG
GGCGCAAAGGTAGGATATGGTACTATGTTTAGGTGGGAGGTGAAGAAAAA
AATCAAGTGGGTTTTTAATGATAATAAACAAACAAAACGAATAAATAAAG
AAAAAAATACAAAAGATCAAGAGACGAAAGGGGATTAGCACAACACACNG
CATGCACAGACAACGGAGAACGATACAACATAACACGACACGAACCGACC
ACACGTGTATTGCAGAGGA
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