EY710632

Overview
NameEY710632
Unique NameEY710632
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1026
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY710632 vs. ExPASy Swiss-Prot
Match: AMYB_MEDSA (Beta-amylase OS=Medicago sativa GN=BMY1 PE=2 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 1.179e-18
Identity = 43/63 (68.25%), Postives = 48/63 (76.19%), Query Frame = 1
Query:    4 IFKIFVKKMHADQDYCPDPQKYNHEIDPLERSKPKFSNEELMEATKKLLPFPWDEETDMNVGG 192
            IFK FV KMHADQDYC DP+KYNH I PL+RS PK  ++ L EATK + PFPWD ETDM V G
Sbjct:  434 IFKKFVVKMHADQDYCSDPEKYNHGIPPLKRSGPKIPDDVLNEATKPIPPFPWDSETDMKVDG 496          
BLAST of EY710632 vs. ExPASy Swiss-Prot
Match: AMYB_VIGUN (Beta-amylase OS=Vigna unguiculata GN=BMY1 PE=2 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 2.011e-18
Identity = 43/63 (68.25%), Postives = 48/63 (76.19%), Query Frame = 1
Query:    4 IFKIFVKKMHADQDYCPDPQKYNHEIDPLERSKPKFSNEELMEATKKLLPFPWDEETDMNVGG 192
            IFK FV KMHADQDYC DPQ+YNH I PL+RS+PK   + L EATK + PFPWD ETDM V G
Sbjct:  434 IFKKFVVKMHADQDYCEDPQEYNHGIPPLKRSEPKIPVDVLNEATKPIPPFPWDSETDMKVDG 496          
BLAST of EY710632 vs. ExPASy Swiss-Prot
Match: AMYB_TRIRP (Beta-amylase OS=Trifolium repens GN=BMY1 PE=2 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 3.431e-18
Identity = 41/64 (64.06%), Postives = 49/64 (76.56%), Query Frame = 1
Query:    1 KIFKIFVKKMHADQDYCPDPQKYNHEIDPLERSKPKFSNEELMEATKKLLPFPWDEETDMNVGG 192
            +IFK FV KMHADQ +C DPQ+YNH I PL+RS P    ++L+EATK +LPFPWD ETDM V G
Sbjct:  433 EIFKKFVVKMHADQSHCDDPQEYNHAIPPLKRSGPNIPVDDLLEATKPILPFPWDSETDMKVDG 496          
BLAST of EY710632 vs. ExPASy Swiss-Prot
Match: AMYB_SOYBN (Beta-amylase OS=Glycine max GN=BMY1 PE=1 SV=3)

HSP 1 Score: 90.1225 bits (222), Expect = 2.224e-17
Identity = 43/63 (68.25%), Postives = 46/63 (73.02%), Query Frame = 1
Query:    4 IFKIFVKKMHADQDYCPDPQKYNHEIDPLERSKPKFSNEELMEATKKLLPFPWDEETDMNVGG 192
            IFK FV KMHADQDYC +PQKYNH I PL+ S PK   E L+EATK  LPFPW  ETDM V G
Sbjct:  434 IFKKFVLKMHADQDYCANPQKYNHAITPLKPSAPKIPIEVLLEATKPTLPFPWLPETDMKVDG 496          
BLAST of EY710632 vs. ExPASy Swiss-Prot
Match: AMYB_ARATH (Beta-amylase OS=Arabidopsis thaliana GN=BMY1 PE=2 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 3.110e-11
Identity = 31/64 (48.44%), Postives = 42/64 (65.62%), Query Frame = 1
Query:    1 KIFKIFVKKMHADQDYCPDPQKYNHEIDPLERSKPKFSNEELMEATKKLLPFPWDEETDMNVGG 192
            ++FK  V+KMHADQDYC D  KY HEI PL+ S  + + E++ +A +    F WD ETD+ V G
Sbjct:  435 ELFKKLVRKMHADQDYCGDAAKYGHEIVPLKTSNSQLTLEDIADAAQPSGAFKWDSETDLKVDG 498          
The following BLAST results are available for this feature:
BLAST of EY710632 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 5
Match NameE-valueIdentityDescription
AMYB_MEDSA1.179e-1868.25Beta-amylase OS=Medicago sativa GN=BMY1 PE=2 SV=1[more]
AMYB_VIGUN2.011e-1868.25Beta-amylase OS=Vigna unguiculata GN=BMY1 PE=2 SV=... [more]
AMYB_TRIRP3.431e-1864.06Beta-amylase OS=Trifolium repens GN=BMY1 PE=2 SV=1[more]
AMYB_SOYBN2.224e-1768.25Beta-amylase OS=Glycine max GN=BMY1 PE=1 SV=3[more]
AMYB_ARATH3.110e-1148.44Beta-amylase OS=Arabidopsis thaliana GN=BMY1 PE=2 ... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C3-701-083-D09-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY710632 ID=EY710632; Name=EY710632; organism=Citrus sinensis; type=EST; length=1026bp
AAGATATTTAAGATTTTTGTGAAGAAAATGCATGCAGATCAGGATTACTG
TCCAGACCCGCAAAAGTACAATCATGAAATTGATCCACTTGAACGTTCAA
AGCCAAAGTTTTCAAATGAGGAACTTATGGAAGCGACCAAGAAACTGCTG
CCGTTCCCATGGGATGAAGAAACTGACATGAATGTTGGTGGTACTCGTGG
TATACTTGCGGCTTTGTTTGGCAAAATATTCTCTATGTTCAAGTGAGGAG
CATGTTATAGCAAAATTAGAGTAATCAATCAAATAAGCAACTAGATTTGC
AGCGCTCATAAATTGCCCTCACGTGGCTGTGTTAGGACAACTTTTAGATA
TCAATCTTTTGGAAATATGGATTGGCTTTTCCATTTCATCAGTGCAAGTT
TTTCTCAGGACTGGAATAAGTCCCCAGGAGAGTTACTTCTCCCGTTTTGA
GGGCAAATCTATGTAAAATCCAAAAACCGGTTTGGGTGGTAGATGTGGAG
TGCGGGCTAGAGAGTTGACAAAATGCAAATTTGACAAAAAACGACTAGTG
GACTGTCAGAAGGCCCCAAAATTTGAGAAGAAACACAAGAAGAACACAAA
CAATAAGGAGAAGAACGCGCAAAAAGCAAAAAGCGTAGCACAAGAAAGAA
AAGAAAAACAACAGACAGAAAGAAAAAAAAAAAAAAAGAACAAAGAACAC
CCAACCACCGAACAAACCACAAACAAAAACAGAAAACAGCACACAAGACC
CGAACAAGAACGGGAGCGAGAGGGCAGCCAAAGAGAGCAGGAAGAGAGAA
CGGAAGGGAGGGAGAGGAGGGAGGAAAGAGGGGCGGGAGAGAAGGAGCAC
CACACACCAGCATACAGAGCGACAGAAGAAACCAGATGAAACGGAAGTGA
ACAGAAAGACGAACATAGAAGGAGAACAATGAAGAAACGAGAAATGGAAA
AAACGAAAAGCCGAGTTGAAAAAGACAAAAGAAATCGAAAGAAACAGAAC
AAACACCAAAGAAGAAAAGAAACGAA
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