EY710631

Overview
NameEY710631
Unique NameEY710631
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1036
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY710631 vs. ExPASy Swiss-Prot
Match: BCHH_RHOS4 (Magnesium-chelatase subunit H OS=Rhodobacter sphaeroides (strain ATCC 17023 / 2.4.1 / NCIB 8253 / DSM 158) GN=bchH PE=3 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 1.793e-29
Identity = 59/128 (46.09%), Postives = 85/128 (66.41%), Query Frame = 1
Query:   16 RPVSDTFGRVNRVEPVSLEELGRPRIDVVVNCSGVFRDLFINQMNLLDRAVKMVAELD-EPEEQNYVRKHALEQAKALGIDVREAATRVFSNASGSYSSNINLAVENSSWNDEKQLQDMYLSRKSFAF 396
            RP  D +GR+   + + L ELGRPRIDV++  SG+FRDL   Q  +L  A    A  + EP  QN++R HAL  A+ +G+D+  A+ RVFSNA G+Y SN+N+ V +S++ +E +L D Y +RKSFA+
Sbjct:  868 RPRFDHYGRLAGADLIPLSELGRPRIDVIMTLSGIFRDLLPLQTRMLAEAAWKAANAEGEPLAQNFIRAHALSYAQEMGVDMETASLRVFSNAEGAYGSNVNVLVGSSAFGEEDELADAYEARKSFAY 995          

HSP 2 Score: 33.8834 bits (76), Expect = 1.793e-29
Identity = 14/37 (37.84%), Postives = 24/37 (64.86%), Query Frame = 2
Query:  425 VRKRKVFEMALGTADATFQNLDSSEISLTDVNPYFDS 535
            V+   + + +L T D  +QNL+S E+ +T V+ YFD+
Sbjct: 1002 VQNAALLQKSLKTVDVAYQNLESVELGVTTVDHYFDT 1038          
BLAST of EY710631 vs. ExPASy Swiss-Prot
Match: BCHH_RHOCA (Magnesium-chelatase subunit H OS=Rhodobacter capsulatus GN=bchH PE=3 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 2.691e-27
Identity = 60/131 (45.80%), Postives = 81/131 (61.83%), Query Frame = 1
Query:   16 RPVSDTFGRVNRVEPVSLEELGRPRIDVVVNCSGVFRDLFINQMNLLDRAVKMVAELD-EPEEQNYVRKHALEQAKALGIDVREAATRVFSNASGSYSSNINLAVENSSWNDEKQLQDMYLSRKSFAFDCD 405
            RP  D +GR+   E + L ELGRPRIDVV+  SG+FRDL   Q  LL  A  + A  + EP  QN++R + L   +  G+D   A+ RVFSNA G+Y SN+N  V ++ + DE +L D Y +RKSFA+  D
Sbjct:  868 RPRFDNYGRLAGAELIPLSELGRPRIDVVMTLSGIFRDLLPLQTKLLAEAAYLCASAENEPLAQNFIRANVLATMQDTGMDFETASLRVFSNAEGAYGSNVNTLVGSAGFGDEDELADAYEARKSFAYGRD 998          

HSP 2 Score: 31.9574 bits (71), Expect = 2.691e-27
Identity = 22/66 (33.33%), Postives = 31/66 (46.97%), Query Frame = 2
Query:  440 VFEMALGTADATFQNLDSSEISLTDVNPYFD-----SRPTYLVQSFQEGWKEPNGYIAGYTHDYGS 622
            + +  L   D  +QNL+S E+ +T V+ YFD     +R T   Q    G KE   YI   T   G+
Sbjct: 1007 LLQNVLSKVDLAYQNLESVELGVTTVDHYFDTLGGIARATKRAQ----GGKETPVYIGDQTRGAGT 1068          
BLAST of EY710631 vs. ExPASy Swiss-Prot
Match: Y1441_METJA (Uncharacterized protein MJ1441 OS=Methanocaldococcus jannaschii GN=MJ1441 PE=3 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 6.123e-23
Identity = 53/126 (42.06%), Postives = 80/126 (63.49%), Query Frame = 1
Query:   37 GRVNRVEPVSLEELGRPRIDVVVNCSGVFRDLFINQMNLLDRAVKMVAELDEPEEQNYVRKHALEQAKALGIDVREAATRVFSNASGSYSSNINLAVENSSWNDEKQLQDMYLSRKSFAFDCDAPG 414
            GRV  +E + LEELGRPRIDV +  SG+ RD+F N + L+D A+  VA LDEP E N+V+KH +E     G+  RE+  R+F +  G+Y + +  AV  S+W +++ L+D ++   S+A+  D  G
Sbjct:  882 GRVVGLEVIPLEELGRPRIDVTIRVSGITRDMFPNCIELVDEAIMKVANLDEPLEMNFVKKHVVENLNK-GLSFRESTFRIFCSPPGTYGNGVKYAVYASAWENDEDLKDAFIYWNSYAYGKDVYG 1006          
BLAST of EY710631 vs. ExPASy Swiss-Prot
Match: BCHH_CHLP8 (Magnesium-chelatase subunit H OS=Chlorobaculum parvum (strain NCIB 8327) GN=bchH PE=3 SV=2)

HSP 1 Score: 108.227 bits (269), Expect = 7.997e-23
Identity = 53/137 (38.69%), Postives = 85/137 (62.04%), Query Frame = 1
Query:   19 PVSDTFGRVNRVEPVSLEELGRPRIDVVVNCSGVFRDLFINQMNLLDRAVKMVAELDEPEEQNYVRKHALEQAKALGIDVREAATRVFSNASGSYSSNINLAVENSSWNDEKQLQDMYLSRKSFAFDCDAPGAGMSE 429
            P  D FG+++      L++LGRPR+DV++  S +FRD F   M+ LDR VK  A+ DEP E N+++KH +++A A G+D   A +R F+ A G+Y + ++  +E+S+W +E  L D+++ R S A+     G   SE
Sbjct:  947 PAYDAFGKISHYNLTPLDKLGRPRVDVLMQLSPIFRDAFGILMDQLDRLVKDAAKADEPHEMNFIKKH-VDEALAEGMDFEAATSRQFTQAPGAYGTYVDDMIEDSAWENEGDLDDLFIRRNSSAYGGGRKGEKQSE 1082          
BLAST of EY710631 vs. ExPASy Swiss-Prot
Match: Y908_METJA (Uncharacterized protein MJ0908 OS=Methanocaldococcus jannaschii GN=MJ0908 PE=3 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 3.039e-22
Identity = 55/135 (40.74%), Postives = 82/135 (60.74%), Query Frame = 1
Query:   13 VRPVSDTFGRVNRVEPVSLEELGRPRIDVVVNCSGVFRDLFINQMNLLDRAVKMVAELDEPEEQNYVRKHALEQAK---ALGIDVREAAT----RVFSNASGSYSSNINLAVENSSWNDEKQLQDMYLSRKSFAF 396
            V+PV +  GRV  +E + LEELGRPRIDV +  SG+FRD F N + L+D A+KMVA LDEP+E NYV+KH  E+ +     GID + A      R+FS+  G Y + ++  ++  +W   +    +Y+    +A+
Sbjct:  901 VKPVWNKMGRVVGLEVIPLEELGRPRIDVTLRISGLFRDTFPNVVELIDEAIKMVANLDEPDEMNYVKKHYREEVEEKIKKGIDEKTAKETSLYRIFSDKPGCYGAGVSHLIDEKNWESIEDFAKVYVEWGGYAY 1035          
BLAST of EY710631 vs. ExPASy Swiss-Prot
Match: COBN_PSEAE (Aerobic cobaltochelatase subunit cobN OS=Pseudomonas aeruginosa GN=cobN PE=3 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 2.579e-13
Identity = 48/132 (36.36%), Postives = 66/132 (50.00%), Query Frame = 1
Query:   58 PVSLEELGRPRIDVVVNCSGVFRDLFINQMNLLDRAVKMVAELDEPEEQNYV-------RKHALEQAKALGIDVREAATRVFSNASGSYSSNINLAVENSSWNDEKQLQDMYLSRKSFAFDCDAPGAGMSEK 432
            PVSL  L RPR+DV +  SG FRD F N + L D AV+ VAELDE EE N +       R+    Q  A     R+A  R+F    G+Y + +  A+E   W     L ++YL+   +A+     G    E+
Sbjct:  939 PVSL--LDRPRVDVTLRVSGFFRDAFANLIRLFDAAVQAVAELDEAEELNPLAARVRLERQRLEAQGTAPAEARRQAGWRIFGAKPGAYGAGVQGAIEERLWETRADLAEVYLNWGGYAYGAADDGTPARER 1068          
BLAST of EY710631 vs. ExPASy Swiss-Prot
Match: COBN_PSEDE (Aerobic cobaltochelatase subunit cobN OS=Pseudomonas denitrificans GN=cobN PE=1 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 4.863e-12
Identity = 43/132 (32.58%), Postives = 69/132 (52.27%), Query Frame = 1
Query:   40 RVNRVEPVSLEELGRPRIDVVVNCSGVFRDLFINQMNLLDRAVKMVAELDEPEEQNYVRKHALEQAKAL---GIDVREAAT----RVFSNASGSYSSNINLAVENSSWNDEKQLQDMYLSRKSFAFDCDAPG 414
            RV   E V L  LGRPR+DV +  SG FRD F +Q+ L D+A++ VA L+E +  N +      +++ L   G++  EAA     RVF    G+Y + +   ++   W  +  L + YL+  ++A+     G
Sbjct:  953 RVMGYEIVPLAVLGRPRVDVTLRISGFFRDAFPDQIALFDKAIRAVA-LEEDDADNMIAARMRAESRRLEAEGVEAAEAARRASYRVFGAKPGAYGAALQALIDEKGWETKADLAEAYLTWGAYAYGAGEEG 1083          
The following BLAST results are available for this feature:
BLAST of EY710631 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 7
Match NameE-valueIdentityDescription
BCHH_RHOS41.793e-2946.09Magnesium-chelatase subunit H OS=Rhodobacter sphae... [more]
BCHH_RHOCA2.691e-2745.80Magnesium-chelatase subunit H OS=Rhodobacter capsu... [more]
Y1441_METJA6.123e-2342.06Uncharacterized protein MJ1441 OS=Methanocaldococc... [more]
BCHH_CHLP87.997e-2338.69Magnesium-chelatase subunit H OS=Chlorobaculum par... [more]
Y908_METJA3.039e-2240.74Uncharacterized protein MJ0908 OS=Methanocaldococc... [more]
COBN_PSEAE2.579e-1336.36Aerobic cobaltochelatase subunit cobN OS=Pseudomon... [more]
COBN_PSEDE4.863e-1232.58Aerobic cobaltochelatase subunit cobN OS=Pseudomon... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C3-701-083-D08-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY710631 ID=EY710631; Name=EY710631; organism=Citrus sinensis; type=EST; length=1036bp
CCACGCGTCCGGGTAAGGCCTGTATCTGACACATTTGGTAGAGTCAACCG
AGTAGAGCCAGTTAGTCTTGAAGAGCTTGGAAGGCCCAGGATTGATGTTG
TTGTTAATTGCTCTGGAGTTTTCAGAGACCTCTTCATAAATCAGATGAAT
CTGCTTGACCGGGCAGTGAAGATGGTTGCTGAACTTGATGAACCAGAAGA
ACAGAATTATGTTAGGAAGCATGCACTAGAACAAGCTAAAGCCCTGGGTA
TCGATGTTCGTGAAGCAGCAACTCGGGTTTTCTCCAATGCCTCAGGATCC
TACTCCTCCAACATAAACCTTGCTGTTGAGAATTCCTCATGGAATGACGA
GAAACAGCTCCAAGACATGTATTTGAGCAGGAAGTCCTTTGCCTTTGATT
GTGATGCCCCTGGCGCAGGCATGAGTGAGAAAAAGAAAAGTTTTTGAGAT
GGCTCTAGGCACAGCAGACGCCACATTCCAAAACCTCGACTCCTCTGAAA
TCTCCCTCACTGATGTGAACCCCTACTTCGATTCCCGACCCACATATTTG
GTCCAGAGCTTTCAGGAAGGGTGGAAAGAGCCTAATGGCTACATTGCTGG
ATATACCCACGATTATGGCTCAAGGTGCGTACCCCTTGGTGAAAACCCGG
GGGGGCTTGATCGACGAAAACCAAATATTTAACCCCAAAATGAGAAATAA
GGAATGATGTACCAAAGGATATAAAGATGTTCAAGAAAAATGGAAACGGG
ACATAAAACCCAGGAAGCAGAGGAAGAAGCACCATACGGGACCGGCCACA
CAAACGAGTACCACAAAGCTGGAAAAACGATGTTCTTAAACGAAAGGACA
AGAGAAATGAGGGGACAGAGGAAGGCAGAAACGTACAGTAAAAACAATCA
GGCTGACTAAGGGCAAGGGAAGAGAGAAAAGACGCAGACGAAGGACCGGA
ATACGAGTGCAGAGGAGAAGAACAAGAGTAGGAAGTGAACTATTGCGGAC
GGACGAGAGAACAATATGTTACGCGAGGGACGAAGC
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