EY685747

Overview
NameEY685747
Unique NameEY685747
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length538
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY685747 vs. ExPASy Swiss-Prot
Match: TKTC_SPIOL (Transketolase, chloroplastic OS=Spinacia oleracea PE=1 SV=1)

HSP 1 Score: 205.297 bits (521), Expect = 1.511e-52
Identity = 103/145 (71.03%), Postives = 113/145 (77.93%), Query Frame = 2
Query:    2 HISIDGDTEIAFTENVDKRFEGLGWHVIWVKNGNTGYDDIRAAIKEAKAVTDKPTLIRVTTTIGFGSPNKANSYSVHGSALGAKEVDATRKNLGWPYEPFPVPEDG*KALGVAMLLRAPLLKLNGMPNFVNYEKNYP*KTCEFKA 436
            HISIDGDT IAFTE+VD RFE LGWHVIWVKNGNTGYD+IRAAIKEAK VTDKPTLI+VTTTIGFGSPNK+NSYSVHGSALG+KEV+ATR+NLGWPYEPF VPE+  K            L+      F  YEK YP    EFK+
Sbjct:  264 HISIDGDTAIAFTESVDLRFEALGWHVIWVKNGNTGYDEIRAAIKEAKTVTDKPTLIKVTTTIGFGSPNKSNSYSVHGSALGSKEVEATRQNLGWPYEPFHVPEEV-KKHWSRHTPEGASLEAEWNTKFAEYEKKYPEDATEFKS 407          
BLAST of EY685747 vs. ExPASy Swiss-Prot
Match: TKTC_CRAPL (Transketolase, chloroplastic (Fragment) OS=Craterostigma plantagineum GN=TKT3 PE=1 SV=1)

HSP 1 Score: 202.986 bits (515), Expect = 7.499e-52
Identity = 100/145 (68.97%), Postives = 114/145 (78.62%), Query Frame = 2
Query:    2 HISIDGDTEIAFTENVDKRFEGLGWHVIWVKNGNTGYDDIRAAIKEAKAVTDKPTLIRVTTTIGFGSPNKANSYSVHGSALGAKEVDATRKNLGWPYEPFPVPEDG*KALGVAMLLRAPLLKLNGMPNFVNYEKNYP*KTCEFKA 436
            HISIDGDT+IAFTE+VDKRFE LGWHVIWVKNGN GYD IRAAIKEA+AV DKPT+I++TTTIGFGSPNK+NSYSVHGSALGAKEV+ATR+NLGWPYEPF VP+D  K        +   L+      F  YEK YP +  E K+
Sbjct:   42 HISIDGDTDIAFTEDVDKRFEALGWHVIWVKNGNNGYDKIRAAIKEAQAVKDKPTMIKITTTIGFGSPNKSNSYSVHGSALGAKEVEATRQNLGWPYEPFHVPDDV-KKHWSRHTPQGASLESEWNAKFAEYEKKYPEEAAELKS 185          
BLAST of EY685747 vs. ExPASy Swiss-Prot
Match: TKTC_SOLTU (Transketolase, chloroplastic OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 201.83 bits (512), Expect = 1.671e-51
Identity = 101/145 (69.66%), Postives = 111/145 (76.55%), Query Frame = 2
Query:    2 HISIDGDTEIAFTENVDKRFEGLGWHVIWVKNGNTGYDDIRAAIKEAKAVTDKPTLIRVTTTIGFGSPNKANSYSVHGSALGAKEVDATRKNLGWPYEPFPVPEDG*KALGVAMLLRAPLLKLNGMPNFVNYEKNYP*KTCEFKA 436
            HISIDGDTEIAFTE+V  RFE LGWHVIWVKNGNTGYD+IRAAIKEAKAV DKPT+I+VTTTIGFGSPNKANSYSVHGS LGAKEV+ATR NLGWPYEPF VPED  K+           L+      F  YEK Y  +  + K+
Sbjct:  264 HISIDGDTEIAFTEDVSARFESLGWHVIWVKNGNTGYDEIRAAIKEAKAVKDKPTMIKVTTTIGFGSPNKANSYSVHGSGLGAKEVEATRNNLGWPYEPFHVPEDV-KSHWSRHTPEGAALETEWNAKFAEYEKKYAEEAADLKS 407          
BLAST of EY685747 vs. ExPASy Swiss-Prot
Match: TKTC_MAIZE (Transketolase, chloroplastic OS=Zea mays PE=1 SV=1)

HSP 1 Score: 200.675 bits (509), Expect = 3.722e-51
Identity = 101/136 (74.26%), Postives = 109/136 (80.15%), Query Frame = 2
Query:    2 HISIDGDTEIAFTENVDKRFEGLGWHVIWVKNGNTGYDDIRAAIKEAKAVTDKPTLIRVTTTIGFGSPNKANSYSVHGSALGAKEVDATRKNLGWPYEPFPVPEDG*KALGVAMLLRAPLLKLNGMPNFVNYEKNY 409
            HISIDGDTEIAFTE+V  RFE LGWH IWVKNGNTGYDDIRAAIKEAKAVTDKPTLI+VTTTIGFGSPNKANSYSVHGSALGAKEV+ATR+NLGWPY+ F VPED  K+           L+ +    F  YEK Y
Sbjct:  199 HISIDGDTEIAFTEDVSTRFEALGWHTIWVKNGNTGYDDIRAAIKEAKAVTDKPTLIKVTTTIGFGSPNKANSYSVHGSALGAKEVEATRQNLGWPYDTFFVPEDV-KSHWSRHTPEGAALEADWNAKFAEYEKKY 333          
BLAST of EY685747 vs. ExPASy Swiss-Prot
Match: TKT7_CRAPL (Transketolase 7 OS=Craterostigma plantagineum GN=TKT7 PE=2 SV=1)

HSP 1 Score: 182.57 bits (462), Expect = 1.049e-45
Identity = 85/145 (58.62%), Postives = 111/145 (76.55%), Query Frame = 2
Query:    2 HISIDGDTEIAFTENVDKRFEGLGWHVIWVKNGNTGYDDIRAAIKEAKAVTDKPTLIRVTTTIGFGSPNKANSYSVHGSALGAKEVDATRKNLGWPYEPFPVPEDG*KALGVAMLLRAPLLKLNGMPNFVNYEKNYP*KTCEFKA 436
            HI+IDGDT++AFTE+VDKRF+ LGWHVIWVKNGN G D+IRAAI+EAK+V D+PT+I+VTTTIG+G+P+KAN+Y VHG+ALG KE +ATRKNLGWPYEPF VP+D  K      +     L+      F  ++K +P +  + K+
Sbjct:  197 HITIDGDTDVAFTEDVDKRFDALGWHVIWVKNGNDGCDEIRAAIEEAKSVKDRPTMIKVTTTIGYGAPSKANTYGVHGNALGPKEAEATRKNLGWPYEPFHVPDDV-KKHWSRHIAEGAALESAWNAKFAEFQKKFPEEAADLKS 340          
BLAST of EY685747 vs. ExPASy Swiss-Prot
Match: TKTA_CRAPL (Transketolase 10 OS=Craterostigma plantagineum GN=TKT10 PE=2 SV=1)

HSP 1 Score: 179.104 bits (453), Expect = 1.160e-44
Identity = 89/145 (61.38%), Postives = 106/145 (73.10%), Query Frame = 2
Query:    2 HISIDGDTEIAFTENVDKRFEGLGWHVIWVKNGNTGYDDIRAAIKEAKAVTDKPTLIRVTTTIGFGSPNKANSYSVHGSALGAKEVDATRKNLGWPYEPFPVPEDG*KALGVAMLLRAPLLKLNGMPNFVNYEKNYP*KTCEFKA 436
            HI+IDGDT++AFTE+V KRFE LGWHV+ V NGN GYD+IR AIK AK+VTDKPTLI+V TTIGFGSPNKAN+Y VHG+ALG KE +ATR+NLGWPYE F VP+D  K      +     L+      F  YEK YP +  E K+
Sbjct:  201 HITIDGDTDLAFTEDVGKRFEALGWHVLTVANGNDGYDEIREAIKVAKSVTDKPTLIKVATTIGFGSPNKANTYGVHGNALGPKEAEATRQNLGWPYETFHVPDDV-KKHWSRHISEGAELESAWNAKFAEYEKKYPKEAAELKS 344          
BLAST of EY685747 vs. ExPASy Swiss-Prot
Match: TKT_ANASP (Transketolase OS=Anabaena sp. (strain PCC 7120) GN=tkt PE=1 SV=1)

HSP 1 Score: 156.762 bits (395), Expect = 6.163e-38
Identity = 79/146 (54.11%), Postives = 102/146 (69.86%), Query Frame = 2
Query:    2 HISIDGDTEIAFTENVDKRFEGLGWHVIWVKNGNTGYDDIRAAIKEAKAVTDKPTLIRVTTTIGFGSPNKANSYSVHGSALGAKEVDATRKNLGWPYEPFPVPEDG*KALGVAMLLRAPLLKLNGMPNFVNYEKNYP*KTCEFKAY 439
            HISIDG T++AFTE+V KRFE  GWHVI VK+GNT  + I  AI+EAKAVTDKPT+I+VTT IG+GSPNK+N+  VHG+ALG  EV  TR+NLGW ++PF VPED       A + R    + +    + +Y+  YP +  EF+ Y
Sbjct:  192 HISIDGSTDVAFTEDVSKRFESYGWHVIHVKDGNTDLEAIHKAIEEAKAVTDKPTMIKVTTIIGYGSPNKSNTAGVHGAALGGDEVALTRQNLGWSHDPFVVPEDVLNYTRKA-VERGAGYESDWNKTYADYKAKYPQEAAEFERY 336          
BLAST of EY685747 vs. ExPASy Swiss-Prot
Match: TKT2_VIBCH (Transketolase 2 OS=Vibrio cholerae GN=tkt2 PE=3 SV=2)

HSP 1 Score: 109.768 bits (273), Expect = 8.640e-24
Identity = 64/143 (44.76%), Postives = 80/143 (55.94%), Query Frame = 2
Query:    5 ISIDGDTEIAFTENVDKRFEGLGWHVIWVKNGNTGYDDIRAAIKEAKAVTDKPTLIRVTTTIGFGSPNKANSYSVHGSALGAKEVDATRKNLGWPYEPFPVPEDG*KALGVAMLLRAPLLKLNGMPNFVNYEKNYP*KTCEFK 433
            ISIDG  E  F+++  KRFE  GWHVI   +G+   D I AAI+ AKA T +PTLI   T IGFGSPNKA S+  HG+ LG  E+ A R+ LGW Y PF +P D   A        +     +    F  Y K YP +  E+K
Sbjct:  186 ISIDGHVEGWFSDDTPKRFEAYGWHVIPAVDGHDA-DAINAAIEAAKAETSRPTLICTKTIIGFGSPNKAGSHDCHGAPLGNDEIKAAREFLGWEYAPFEIPTDIYAAWDAKQAGASKEAAWD--EKFAAYAKAYPAEAAEYK 325          
BLAST of EY685747 vs. ExPASy Swiss-Prot
Match: TKT1_VIBCH (Transketolase 1 OS=Vibrio cholerae GN=tkt1 PE=3 SV=2)

HSP 1 Score: 109.768 bits (273), Expect = 8.640e-24
Identity = 64/143 (44.76%), Postives = 80/143 (55.94%), Query Frame = 2
Query:    5 ISIDGDTEIAFTENVDKRFEGLGWHVIWVKNGNTGYDDIRAAIKEAKAVTDKPTLIRVTTTIGFGSPNKANSYSVHGSALGAKEVDATRKNLGWPYEPFPVPEDG*KALGVAMLLRAPLLKLNGMPNFVNYEKNYP*KTCEFK 433
            ISIDG  E  F+++  KRFE  GWHVI   +G+   D I AAI+ AKA T +PTLI   T IGFGSPNKA S+  HG+ LG  E+ A R+ LGW + PF +P D   A        +     N    F  Y K YP +  E+K
Sbjct:  187 ISIDGHVEGWFSDDTPKRFEAYGWHVIPAVDGHDA-DAINAAIEAAKAETSRPTLICTKTIIGFGSPNKAGSHDCHGAPLGNDEIKAAREFLGWEHAPFEIPADIYAAWDAKQAGASKEAAWN--EKFAAYAKAYPAEAAEYK 326          
BLAST of EY685747 vs. ExPASy Swiss-Prot
Match: TKT_STRPN (Probable transketolase OS=Streptococcus pneumoniae GN=tkt PE=3 SV=2)

HSP 1 Score: 108.227 bits (269), Expect = 2.514e-23
Identity = 54/103 (52.43%), Postives = 73/103 (70.87%), Query Frame = 2
Query:    5 ISIDGDTEIAFTENVDKRFEGLGWHVIWVKNGNTGYDDIRAAIKEAKAVTDKPTLIRVTTTIGFGSPNKANSYSVHGSALGAKEVDATRKNLGWPYEPFPVPE 313
            I++DG+T+ +FTE+V  R+   GWH   V+NG T  + I AAI+ AKA + KP+LI V T IG+GSPNK  + +VHG+ LGA E  +TR+ LGW YEPF +PE
Sbjct:  186 INLDGETKDSFTESVRDRYNAYGWHTALVENG-TDLEAIHAAIETAKA-SGKPSLIEVKTVIGYGSPNKQGTNAVHGAPLGADETASTRQALGWDYEPFEIPE 286          
The following BLAST results are available for this feature:
BLAST of EY685747 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 55
Match NameE-valueIdentityDescription
TKTC_SPIOL1.511e-5271.03Transketolase, chloroplastic OS=Spinacia oleracea ... [more]
TKTC_CRAPL7.499e-5268.97Transketolase, chloroplastic (Fragment) OS=Cratero... [more]
TKTC_SOLTU1.671e-5169.66Transketolase, chloroplastic OS=Solanum tuberosum ... [more]
TKTC_MAIZE3.722e-5174.26Transketolase, chloroplastic OS=Zea mays PE=1 SV=1[more]
TKT7_CRAPL1.049e-4558.62Transketolase 7 OS=Craterostigma plantagineum GN=T... [more]
TKTA_CRAPL1.160e-4461.38Transketolase 10 OS=Craterostigma plantagineum GN=... [more]
TKT_ANASP6.163e-3854.11Transketolase OS=Anabaena sp. (strain PCC 7120) GN... [more]
TKT2_VIBCH8.640e-2444.76Transketolase 2 OS=Vibrio cholerae GN=tkt2 PE=3 SV... [more]
TKT1_VIBCH8.640e-2444.76Transketolase 1 OS=Vibrio cholerae GN=tkt1 PE=3 SV... [more]
TKT_STRPN2.514e-2352.43Probable transketolase OS=Streptococcus pneumoniae... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C2-003-025-F10-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY685747 ID=EY685747; Name=EY685747; organism=Citrus sinensis; type=EST; length=538bp
TCACATCTCTATTGATGGAGACACGGAGATTGCCTTTACGGAGAACGTTG
ACAAGCGTTTTGAAGGTCTTGGCTGGCATGTTATCTGGGTGAAGAATGGA
AACACTGGCTATGATGATATTCGTGCTGCTATTAAGGAAGCAAAGGCTGT
CACAGATAAACCCACTTTGATTAGGGTGACTACAACCATTGGCTTTGGGT
CTCCAAACAAAGCCAACAGCTACAGTGTACATGGAAGTGCGCTGGGTGCC
AAGGAAGTAGATGCTACTAGAAAGAATCTTGGATGGCCCTACGAGCCTTT
CCCTGTGCCAGAAGATGGTTAAAAAGCACTTGGAGTCGCCATGTTGCTGA
GGGCCCCGCTCTTGAAGCTGAACGGAATGCCCAACTTCGTTAATTATGAA
AAAAACTACCCCTGAAAAACCTGCGAATTTAAGGCCTATCAACAGACGTC
CAATCCATGCCAGTCGGGGAGAAAACCCATTCGAACATAGAAGCCCAGAA
ACACCCAGCGACACCCACCAAAAACTTTTCTCCAACAA
back to top