EY685697

Overview
NameEY685697
Unique NameEY685697
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length944
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
EY685697_ssr546 microsatellite EY685697_ssr546:546..560. BLAST: Citrus ESTs to Prunus persica proteins V1
Homology
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BLAST of EY685697 vs. ExPASy Swiss-Prot
Match: OEP80_ARATH (Outer envelope protein of 80 kDa OS=Arabidopsis thaliana GN=OEP80 PE=1 SV=1)

HSP 1 Score: 196.438 bits (498), Expect = 1.946e-49
Identity = 95/155 (61.29%), Postives = 120/155 (77.42%), Query Frame = 3 
Query:   12 KINISLQRGQIDSILRINYIDPWIEGDDKQTSRTMMVQNSRTPGPLVHRNQPDNSSQTIGRVTASIEFSRPIRPKWSGTA*LFFSVLVLMMKKEILLSRISIAVLFTGSGKTHDDVLIAKFESVYTGSGNHGSSMFVFHMEKGLPVLPKRMHINQ 476
            K+N+SL+RGQIDSI RINY DPWIEGDDK+TSR++MVQNSRTPG LVH NQPDNSS TIGRVTA +E+SRP RPKW+GTA L F       ++   + +   +   T SGK HD+ ++AK ES+YTGSG+ GS+MF F+ME+GLPVLP+ +  N+
Sbjct:  436 KLNVSLERGQIDSIFRINYTDPWIEGDDKRTSRSIMVQNSRTPGNLVHGNQPDNSSLTIGRVTAGVEYSRPFRPKWNGTAGLIFQHAGARDEQGNPIIKDFYSSPLTASGKPHDETMLAKLESIYTGSGDQGSTMFAFNMEQGLPVLPEWLCFNR 590
[Close]
BLAST of EY685697 vs. ExPASy Swiss-Prot
Match: OEP80_ORYSJ (Outer envelope protein of 80 kDa OS=Oryza sativa subsp. japonica GN=OEP80 PE=3 SV=2)

HSP 1 Score: 174.481 bits (441), Expect = 7.919e-43
Identity = 88/156 (56.41%), Postives = 112/156 (71.79%), Query Frame = 3 
Query:   12 KINISLQRGQIDSILRINYIDPWIEGDDKQTSRTMMVQNSRTPGPLVH-RNQPDNSSQTIGRVTASIEFSRPIRPKWSGTA*LFFSVLVLMMKKEILLSRISIAVLFTGSGKTHDDVLIAKFESVYTGSGNHGSSMFVFHMEKGLPVLPKRMHINQ 476
            K+N+SL+RGQIDSI R+NY DPWI+GD+K+TSRT+MVQNSRTPG L+H  + PD+   TIGRVTA IE+SRP RPKWSGT  L F        K   + R       T SG  +DD L+AK ESVYT SG+  S+MFVF++E+GLP+LP+ +  N+
Sbjct:  368 KLNLSLERGQIDSIFRLNYTDPWIDGDNKRTSRTIMVQNSRTPGTLIHGGDHPDHGPITIGRVTAGIEYSRPFRPKWSGTLGLIFQHAGARDDKGNPIIRDFYNSQLTASGNAYDDTLLAKLESVYTDSGDRSSTMFVFNIEQGLPILPEWLSFNR 523
[Close]
BLAST of EY685697 vs. ExPASy Swiss-Prot
Match: OEP80_ORYSI (Outer envelope protein of 80 kDa OS=Oryza sativa subsp. indica GN=OEP80 PE=3 SV=1)

HSP 1 Score: 174.481 bits (441), Expect = 7.919e-43
Identity = 88/156 (56.41%), Postives = 112/156 (71.79%), Query Frame = 3 
Query:   12 KINISLQRGQIDSILRINYIDPWIEGDDKQTSRTMMVQNSRTPGPLVH-RNQPDNSSQTIGRVTASIEFSRPIRPKWSGTA*LFFSVLVLMMKKEILLSRISIAVLFTGSGKTHDDVLIAKFESVYTGSGNHGSSMFVFHMEKGLPVLPKRMHINQ 476
            K+N+SL+RGQIDSI R+NY DPWI+GD+K+TSRT+MVQNSRTPG L+H  + PD+   TIGRVTA IE+SRP RPKWSGT  L F        K   + R       T SG  +DD L+AK ESVYT SG+  S+MFVF++E+GLP+LP+ +  N+
Sbjct:  368 KLNLSLERGQIDSIFRLNYTDPWIDGDNKRTSRTIMVQNSRTPGTLIHGGDHPDHGPITIGRVTAGIEYSRPFRPKWSGTLGLIFQHAGARDDKGNPIIRDFYNSQLTASGNAYDDTLLAKLESVYTDSGDRSSTMFVFNIEQGLPILPEWLSFNR 523
The following BLAST results are available for this feature:
BLAST of EY685697 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 3
Match NameE-valueIdentityDescription
OEP80_ARATH1.946e-4961.29Outer envelope protein of 80 kDa OS=Arabidopsis th... [more]
OEP80_ORYSJ7.919e-4356.41Outer envelope protein of 80 kDa OS=Oryza sativa s... [more]
OEP80_ORYSI7.919e-4356.41Outer envelope protein of 80 kDa OS=Oryza sativa s... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C2-003-025-A05-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY685697 ID=EY685697; Name=EY685697; organism=Citrus sinensis; type=EST; length=944bp
CCACGCGTCCGAAAATCAATATTTCCTTACAGAGGGGCCAAATTGATTCT
ATATTGCGCATAAATTACATTGACCCTTGGATTGAAGGAGATGACAAACA
AACATCAAGAACTATGATGGTTCAGAATTCAAGAACCCCTGGACCGCTTG
TTCATAGGAACCAACCTGACAACAGTAGTCAGACCATTGGACGTGTGACA
GCCAGTATAGAATTCAGTCGACCAATCAGGCCAAAATGGAGTGGGACGGC
ATGATTATTTTTCAGCGTGCTGGTTCTCATGATGAAAAAGGAAATCCTAT
TATCAAGGATTTCTATAGCAGTCCTCTTTACAGGAAGTGGAAAGACCCAT
GATGATGTGTTAATTGCTAAATTTGAGAGTGTATATACTGGTTCTGGCAA
TCACGGTTCTTCAATGTTTGTATTCCACATGGAAAAAGGGCTTCCTGTTC
TGCCCAAGCGCATGCACATCAACCAGAGAGACCGATCACAGCACAAAGCC
GTGACACATACCCCGTGCTCCCACACCACCGACACAAACCCGCCGCACAC
CACACCACACCGCGGCACGGAAAACAAAGACCCCACAAATGCGCAATGCA
CCAAACGACAGGCCCCGAACAACGCCCACCCAGCGCAGGAAGAGACCCCG
AACAACCCAAGCCGGAACCCGCACCAACCGCAACACAAAGCACAGCGGAG
CCGCGCCCAACGAGGCCACGCACCCGAGACACAGCCACACCAACGGCAAG
AGAGCGGACCGCCCCCCACGAAACCGCCAGAGACCACGTCCAACGGCGCA
GCCCAAACCGACGGCGCCAACCCACCAGAACCCAACCCGCCACAACCGCC
CACGCAGCCCCCACCCCTGGCCCCCAACCGTTAACACCCGCCCACAAGAC
GGCATGACACAGACCAAGGACGCCAGCCCAAGGCTGCGCGCGAC
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