EY685652

Overview
NameEY685652
Unique NameEY685652
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length955
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY685652 vs. ExPASy Swiss-Prot
Match: FA18_ARATH (Uncharacterized FAM18-like protein At1g09330 OS=Arabidopsis thaliana GN=At1g09330 PE=2 SV=1)

HSP 1 Score: 217.624 bits (553), Expect = 8.323e-56
Identity = 103/136 (75.74%), Postives = 114/136 (83.82%), Query Frame = 2
Query:    8 SAFLLLLILWVVKNVSGRILVGLRWWNEINDMGESVWKFECLDHESMARMNKKDSWLFWWTLYLSAVAWIVLGIFSLITFQADYLLVVGVCLTLSIAKIIGFTKCQKDAQKQIQQFASPNIAIRFPSGRTSPFTAV 415
            +  L  L  WVVKNVSGRILVGLRWWNEIND+GESVWKFE LD ES+ARMNKKDSWLFWWTLYL+A AW +LG+FSLI FQADYLLVVGVCL+L++A IIGFTKC+KDA+KQ QQFAS  IA RF S   S FT V
Sbjct:   51 TVLLAALDFWVVKNVSGRILVGLRWWNEINDLGESVWKFESLDQESLARMNKKDSWLFWWTLYLAAAAWFILGVFSLIRFQADYLLVVGVCLSLNVANIIGFTKCKKDAKKQFQQFASQTIASRFQSTVQSAFTLV 186          
BLAST of EY685652 vs. ExPASy Swiss-Prot
Match: FA18_DROME (Uncharacterized FAM18-like protein CG5021 OS=Drosophila melanogaster GN=CG5021 PE=2 SV=2)

HSP 1 Score: 96.2857 bits (238), Expect = 2.796e-19
Identity = 46/117 (39.32%), Postives = 70/117 (59.83%), Query Frame = 2
Query:   35 WVVKNVSGRILVGLRWWNEINDMGESVWKFECLDHES-MARMNKKDSWLFWWTLYLSAVAWIVLGIFSLITFQADYLLVVGVCLTLSIAKIIGFTKCQKDAQKQIQQFASPNIAIRF 382
            W VKN+SGR+LVGLRWWN ++D G S W FE  + ES  +R+NK +  +FW  L L  V W +  +F+L   +  +LL+V + + L+ A + G+ KC   A K +   A+  +  +F
Sbjct:   81 WTVKNISGRLLVGLRWWNYVDDDGVSHWVFESKNSESYQSRVNKNEQRIFWLGLILCPVFWGLFFLFALFGLKFKWLLLVMIAIALNAANLYGYVKCNYGANKDLNSAATDFVKTQF 197          
BLAST of EY685652 vs. ExPASy Swiss-Prot
Match: TVP23_DEBHA (Golgi apparatus membrane protein TVP23 OS=Debaryomyces hansenii GN=TVP23 PE=3 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 3.652e-19
Identity = 47/116 (40.52%), Postives = 73/116 (62.93%), Query Frame = 2
Query:   14 FLLLLIL-----WVVKNVSGRILVGLRWWNEI------NDMGESVWKFECLDHESMARMNKKDSWLFWWTLYLSAVAWIVLGIFSLITFQADYLLVVGVCLTLSIAKIIGFTKCQK 328
            F+++++L     W +KN++GR+LVGLRWWNE+      N   E+VW FE +D      +N  DS +FW  LY+   AW+VLG  +L+ F+  YLL++ + ++LS+   + FTKC K
Sbjct:   86 FIIIVLLVSGDFWNLKNIAGRLLVGLRWWNEVSVIKSTNGEFENVWVFETVDPNRY--INPIDSKVFWTLLYVQPAAWVVLGFLALLKFEFLYLLLIIISISLSLTNAMAFTKCDK 199          
BLAST of EY685652 vs. ExPASy Swiss-Prot
Match: TVP23_SCHPO (Golgi apparatus membrane protein tvp23 OS=Schizosaccharomyces pombe GN=tvp23 PE=2 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 4.770e-19
Identity = 50/109 (45.87%), Postives = 68/109 (62.39%), Query Frame = 2
Query:   17 LLLLILWVVKNVSGRILVGLRWWNEINDMGESVWKFECLDHESMARMNKKDSWLFWWTLYLSAVAWIVLGIFSLITFQADYLLVVGVCLTLSIAKIIGFTKCQKDAQKQ 343
            LL + LW VKNVSGR+LVGLRW NE    GES+W FE  D  S  R N  D   FW+ LYL    WI+LGI ++I F+  +L +V V + L+      +++C KDA+++
Sbjct:   85 LLAVDLWTVKNVSGRLLVGLRWRNETGVDGESIWIFESAD-PSRPR-NAVDQKTFWYALYLYPFIWIILGIVAIIRFEFLWLALVAVAIGLTSVNTAAYSRCDKDAKRR 191          
BLAST of EY685652 vs. ExPASy Swiss-Prot
Match: TVP23_PICGU (Golgi apparatus membrane protein TVP23 OS=Pichia guilliermondii GN=TVP23 PE=3 SV=2)

HSP 1 Score: 94.7449 bits (234), Expect = 8.136e-19
Identity = 50/117 (42.74%), Postives = 72/117 (61.54%), Query Frame = 2
Query:   14 FLLLLIL-----WVVKNVSGRILVGLRWWNEINDMG-------ESVWKFECLDHESMARMNKKDSWLFWWTLYLSAVAWIVLGIFSLITFQADYLLVVGVCLTLSIAKIIGFTKCQK 328
            F++L++L     W +KNV+GR+LVGLRWWNE+N +        E+VW FE  D      +N  DS +FW  LY   VAWIVLGI +++ F+  YL+++ + + LS    + FTKC K
Sbjct:   93 FIVLVLLISGDFWNLKNVAGRLLVGLRWWNEVNFIESSSTGEFENVWVFESADPSRY--INPIDSKVFWTLLYGQPVAWIVLGILAVLKFEFLYLILILIAIFLSFTNALAFTKCDK 207          
BLAST of EY685652 vs. ExPASy Swiss-Prot
Match: TVP23_YARLI (Golgi apparatus membrane protein TVP23 OS=Yarrowia lipolytica GN=TVP23 PE=3 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 1.388e-18
Identity = 42/104 (40.38%), Postives = 67/104 (64.42%), Query Frame = 2
Query:   17 LLLLILWVVKNVSGRILVGLRWWNEINDMGESVWKFECLDHESMARMNKKDSWLFWWTLYLSAVAWIVLGIFSLITFQADYLLVVGVCLTLSIAKIIGFTKCQK 328
            LL    W VKN++GR++VGLRWWNE ++ GESVW FE  D +    +N  DS +FW  LY + V W+ L + +L+ FQ   L++V + ++L++   + +++C K
Sbjct:   50 LLAADFWNVKNIAGRLMVGLRWWNEASETGESVWVFETADPQRY--INPIDSKVFWMMLYGAPVLWVCLAVLALLKFQFLSLILVFIAVSLTVTNAMAYSRCDK 151          
BLAST of EY685652 vs. ExPASy Swiss-Prot
Match: FA18A_DICDI (Uncharacterized FAM18-like protein 1 OS=Dictyostelium discoideum GN=DDB_G0276319 PE=3 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 2.367e-18
Identity = 46/112 (41.07%), Postives = 67/112 (59.82%), Query Frame = 2
Query:   35 WVVKNVSGRILVGLRWWNEINDMGESVWKFECLDHESMARMNKKDSWLFWWTLYLSAVAWIVLGIFSLITFQADYLLVVGVCLTLSIAKIIGFTKCQKDAQKQIQQFASPNI 370
            WV KNV+GR LVGLRWWN+I + G + W FE +  +S  ++N  +S +FW  +     AW V  I SL      +L+V  VC  L+ A ++G+ KC KDA+K+++  A   I
Sbjct:   77 WVTKNVTGRKLVGLRWWNQIKEDGTNNWVFESVQDKS--QVNPAESLMFWVPVLAFTAAWFVFSIISLFGLSFLWLVVEIVCFLLAGANLLGYIKCAKDARKKVKGMAQSYI 186          
BLAST of EY685652 vs. ExPASy Swiss-Prot
Match: TVP23_PICST (Golgi apparatus membrane protein TVP23 OS=Pichia stipitis GN=TVP23 PE=3 SV=2)

HSP 1 Score: 90.1225 bits (222), Expect = 2.004e-17
Identity = 48/116 (41.38%), Postives = 70/116 (60.34%), Query Frame = 2
Query:   14 FLLLLIL-----WVVKNVSGRILVGLRWWNEIN----DMGE--SVWKFECLDHESMARMNKKDSWLFWWTLYLSAVAWIVLGIFSLITFQADYLLVVGVCLTLSIAKIIGFTKCQK 328
            F++L++L     W +KNV+GR+LVGLRWWNE N    ++GE  +VW FE  D      +N  DS +FW  LY   V W+V     ++ FQ  YLL++ + ++LS+   + FTKC K
Sbjct:   97 FIILILLFAADFWNLKNVAGRLLVGLRWWNETNATEGNVGEFENVWVFETADPNRY--INPIDSKVFWILLYAQPVVWMVFAFLCVLKFQFLYLLLIIIAISLSLTNAMAFTKCDK 210          
BLAST of EY685652 vs. ExPASy Swiss-Prot
Match: TVP23_PHANO (Golgi apparatus membrane protein TVP23 OS=Phaeosphaeria nodorum GN=TVP23 PE=3 SV=3)

HSP 1 Score: 87.8113 bits (216), Expect = 9.946e-17
Identity = 42/108 (38.89%), Postives = 64/108 (59.26%), Query Frame = 2
Query:   17 LLLLILWVVKNVSGRILVGLRWWNEINDM-GESVWKFECLDHESMARMNKKDSWLFWWTLYLSAVAWIVLGIFSLITFQADYLLVVGVCLTLSIAKIIGFTKCQKDAQ 337
            LL +  + +KN++GR LVGLRWWNE++   G+  W FE  D ES  + N  D   FW  LY+  V W+V+ + +L  F   +L +V + L L+I   + F++C K +Q
Sbjct:   59 LLAMDFYYLKNIAGRRLVGLRWWNEVDGATGDGRWVFESADPESREQ-NATDKRFFWMALYVQPVLWVVMAVVALFGFNFIWLTLVAIALVLTITNTLAFSRCDKFSQ 165          
BLAST of EY685652 vs. ExPASy Swiss-Prot
Match: TVP23_LACBS (Golgi apparatus membrane protein TVP23 OS=Laccaria bicolor (strain S238N-H82) GN=TVP23 PE=3 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 1.299e-16
Identity = 46/113 (40.71%), Postives = 67/113 (59.29%), Query Frame = 2
Query:    5 ASAFLLLLILWVVKNVSGRILVGLRWWNEINDMGESVWKFECLDHESMARMNKKDSWLFWWTLYLSAVAWIVLGIFSLITFQADYLLVVGVCLTLSIAKIIGFTKCQKDAQKQ 343
            A   LL +  W  +NVSGR LVGLR+WN++++ GES W FE  D    A  N  DS +FW  LY+  + W VL I SL+     ++ +V + L  +I  +IGFT   +DA+++
Sbjct:  121 AVVVLLAMDFWNCRNVSGRTLVGLRFWNQVDEDGESYWVFESRDPSRPA--NPIDSKMFWIALYVFPLLWSVLLIVSLLKLGFAFIPIVVLALVFNITNVIGFTYADRDAKQK 231          
The following BLAST results are available for this feature:
BLAST of EY685652 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 35
Match NameE-valueIdentityDescription
FA18_ARATH8.323e-5675.74Uncharacterized FAM18-like protein At1g09330 OS=Ar... [more]
FA18_DROME2.796e-1939.32Uncharacterized FAM18-like protein CG5021 OS=Droso... [more]
TVP23_DEBHA3.652e-1940.52Golgi apparatus membrane protein TVP23 OS=Debaryom... [more]
TVP23_SCHPO4.770e-1945.87Golgi apparatus membrane protein tvp23 OS=Schizosa... [more]
TVP23_PICGU8.136e-1942.74Golgi apparatus membrane protein TVP23 OS=Pichia g... [more]
TVP23_YARLI1.388e-1840.38Golgi apparatus membrane protein TVP23 OS=Yarrowia... [more]
FA18A_DICDI2.367e-1841.07Uncharacterized FAM18-like protein 1 OS=Dictyostel... [more]
TVP23_PICST2.004e-1741.38Golgi apparatus membrane protein TVP23 OS=Pichia s... [more]
TVP23_PHANO9.946e-1738.89Golgi apparatus membrane protein TVP23 OS=Phaeosph... [more]
TVP23_LACBS1.299e-1640.71Golgi apparatus membrane protein TVP23 OS=Laccaria... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C2-003-024-D01-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY685652 ID=EY685652; Name=EY685652; organism=Citrus sinensis; type=EST; length=955bp
CCACGCGTCCGCCTTCTTGCTGCTCTTGATCCTCTGGGTAGTCAAGAATG
TTAGTGGGCGTATCTTAGTTGGTTTGAGGTGGTGGAACGAAATAAATGAT
ATGGGTGAGAGTGTGTGGAAGTTTGAGTGCCTTGACCATGAGTCCATGGC
TCGCATGAACAAGAAAGATTCCTGGCTATTCTGGTGGACCCTTTACCTTT
CGGCTGTTGCTTGGATTGTGCTTGGGATATTTTCTCTCATTACGTTCCAA
GCTGATTATCTCCTGGTTGTTGGTGTCTGTTTGACCCTCAGCATTGCCAA
AATTATTGGTTTTACCAAATGCCAGAAGGATGCTCAGAAGCAGATCCAAC
AATTTGCATCCCCGAACATCGCAATCCGATTCCCCTCTGGCCGTACCTCA
CCTTTCACCGCTGTCAGACGCAGCATGAGAAACCGGAAGAAACCCCACCC
AACAGACCCCCACGGGGACTACCACCCCCGCCACAAACATTCCAGCCACA
ACAAACGAACACAAGAAACAACCACCCCACGCCTCACCATCACAACCGCC
AGCCTCCCCCACCCCCCCCATGACACGACGAAACAATCACCGACAACACA
CCACACCACAGCCTCACGCCACCAACCGTTACACTGCACCAACAAAACCC
ACCCCCATAACGGCCCCATGACCCGCAGCGACCAGACAGTCCAAGCGGCA
AGCTCCGCGCGCCGACCCGGAACACCCACCGACGACCCCACCGCCCCCAC
CCCACAACCAGAGCCACACCCCCCGCCATCACTCGCAAACCACAACGCAC
CAACACACACAAACCAACACCCCACAACACCCGACCTCCCCCCCCAGCCA
CCACTCGCATACACGCCCTCACCCCACCCTCAAACCACACACGACTCGCA
TCGTGTAGCCCCAACGCATATACGCCAATCGAACGGTACCTAGCGGACGC
ACATG
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