EY685640 | Citrus Genome Database

Overview


Name	EY685640
Unique Name	EY685640
Type	EST
Organism	Citrus sinensis (Sweet orange)
Sequence length	950

Libraries


Library Name	Type
Sweet orange bark, greenhouse plant	cdna_library

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
BLAST: Citrus ESTs to Prunus persica proteins V1	2010-05-10
BLAST: Citrus ESTs to Populus V2 proteins	2010-05-10
BLAST: Citrus ESTs to TAIR9	2010-05-10
BLAST: Citrus ESTs to SwissProt	2010-05-10

Homology

[Close]

BLAST of EY685640 vs. ExPASy Swiss-Prot
Match: PMA3_NICPL (Plasma membrane ATPase 3 OS=Nicotiana plumbaginifolia GN=PMA3 PE=1 SV=1)

HSP 1 Score: 322.783 bits (826), Expect = 1.819e-87
Identity = 160/173 (92.49%), Postives = 170/173 (98.27%), Query Frame = 1

Query:    4 RVRNYTIYAVSITIRIVLGFMLLALIWKFDFPPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKLAEIFTTGIVLGSYLAMMTVIFFWAAYKTDFFPRVFGVATLEKTAHDDFRKLASAIYLQVSTISQALIFVTRSRSWSFVERPGILLLVAFLIAQLIATLIAVYANWSF 522
            R++NYTIYAVSITIRIVLGFMLLALIW+FDFPPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKLAEIFTTG+VLG YLAMMTVIFFWAAYKT+FFPRVFGV+TLEKTA DDFRKLASAIYLQVSTISQALIFVTRSRSWSF+ERPG+LL+VAF IAQL+ATLIAVYANWSF
Sbjct:  645 RMKNYTIYAVSITIRIVLGFMLLALIWQFDFPPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKLAEIFTTGVVLGGYLAMMTVIFFWAAYKTNFFPRVFGVSTLEKTATDDFRKLASAIYLQVSTISQALIFVTRSRSWSFMERPGLLLVVAFFIAQLVATLIAVYANWSF 817

[Close]

BLAST of EY685640 vs. ExPASy Swiss-Prot
Match: PMA1_SOLLC (Plasma membrane ATPase 1 OS=Solanum lycopersicum GN=LHA1 PE=2 SV=1)

HSP 1 Score: 322.783 bits (826), Expect = 1.819e-87
Identity = 159/173 (91.91%), Postives = 169/173 (97.69%), Query Frame = 1

Query:    4 RVRNYTIYAVSITIRIVLGFMLLALIWKFDFPPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKLAEIFTTGIVLGSYLAMMTVIFFWAAYKTDFFPRVFGVATLEKTAHDDFRKLASAIYLQVSTISQALIFVTRSRSWSFVERPGILLLVAFLIAQLIATLIAVYANWSF 522
            R++NYTIYAVSITIRIVLGFMLLALIWKFDFPPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKLAEIFTTG+VLG YLAMMTVIFFWAAYKT+FFPR+FGV+TLEKTA DDFRKLASAIYLQVSTISQALIFVTRSRSWSFVERPG+LL+ AF +AQL+ATLIAVYANWSF
Sbjct:  645 RMKNYTIYAVSITIRIVLGFMLLALIWKFDFPPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKLAEIFTTGVVLGGYLAMMTVIFFWAAYKTNFFPRIFGVSTLEKTATDDFRKLASAIYLQVSTISQALIFVTRSRSWSFVERPGLLLVFAFFVAQLVATLIAVYANWSF 817

[Close]

BLAST of EY685640 vs. ExPASy Swiss-Prot
Match: PMA11_ARATH (ATPase 11, plasma membrane-type OS=Arabidopsis thaliana GN=AHA11 PE=1 SV=1)

HSP 1 Score: 322.013 bits (824), Expect = 3.102e-87
Identity = 157/173 (90.75%), Postives = 169/173 (97.69%), Query Frame = 1

Query:    4 RVRNYTIYAVSITIRIVLGFMLLALIWKFDFPPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKLAEIFTTGIVLGSYLAMMTVIFFWAAYKTDFFPRVFGVATLEKTAHDDFRKLASAIYLQVSTISQALIFVTRSRSWSFVERPGILLLVAFLIAQLIATLIAVYANWSF 522
            R++NYTIYAVSITIRIVLGFMLLALIWKFDFPPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKL+EIF TG+V GSY+AMMTVIFFWAAYKTDFFPR FGV+TLEKTAHDDFRKLASAIYLQVS ISQALIFVTRSRSWS+VERPG+LL+VAF++AQL+ATLIAVYANWSF
Sbjct:  645 RMKNYTIYAVSITIRIVLGFMLLALIWKFDFPPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKLSEIFATGVVFGSYMAMMTVIFFWAAYKTDFFPRTFGVSTLEKTAHDDFRKLASAIYLQVSIISQALIFVTRSRSWSYVERPGMLLVVAFILAQLVATLIAVYANWSF 817

[Close]

BLAST of EY685640 vs. ExPASy Swiss-Prot
Match: PMA1_NICPL (Plasma membrane ATPase 1 OS=Nicotiana plumbaginifolia GN=PMA1 PE=2 SV=1)

HSP 1 Score: 320.857 bits (821), Expect = 6.911e-87
Identity = 160/173 (92.49%), Postives = 168/173 (97.11%), Query Frame = 1

Query:    4 RVRNYTIYAVSITIRIVLGFMLLALIWKFDFPPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKLAEIFTTGIVLGSYLAMMTVIFFWAAYKTDFFPRVFGVATLEKTAHDDFRKLASAIYLQVSTISQALIFVTRSRSWSFVERPGILLLVAFLIAQLIATLIAVYANWSF 522
            R++NYTIYAVSITIRIVLGFMLLALIWKFDFPPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKLAEIFTTGIVLG YLAMMTVIFFWAAYKT+FFP VFGV+TLEKTA DDFRKLASAIYLQVS ISQALIFVTRSRSWSFVERPG LL++AF+IAQL+ATLIAVYANWSF
Sbjct:  646 RMKNYTIYAVSITIRIVLGFMLLALIWKFDFPPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKLAEIFTTGIVLGGYLAMMTVIFFWAAYKTNFFPHVFGVSTLEKTATDDFRKLASAIYLQVSIISQALIFVTRSRSWSFVERPGFLLVIAFVIAQLVATLIAVYANWSF 818

[Close]

BLAST of EY685640 vs. ExPASy Swiss-Prot
Match: PMA4_ARATH (ATPase 4, plasma membrane-type OS=Arabidopsis thaliana GN=AHA4 PE=1 SV=2)

HSP 1 Score: 319.701 bits (818), Expect = 1.540e-86
Identity = 155/173 (89.60%), Postives = 167/173 (96.53%), Query Frame = 1

Query:    4 RVRNYTIYAVSITIRIVLGFMLLALIWKFDFPPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKLAEIFTTGIVLGSYLAMMTVIFFWAAYKTDFFPRVFGVATLEKTAHDDFRKLASAIYLQVSTISQALIFVTRSRSWSFVERPGILLLVAFLIAQLIATLIAVYANWSF 522
            R++NYTIYAVSITIRIVLGFMLLALIW+FDFPPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKL+EIF TG+V GSY+AMMTVIFFW +YKTDFFPR FGVATLEKTAHDDFRKLASAIYLQVS ISQALIFVTRSRSWSFVERPGI L++AF++AQL+ATLIAVYANWSF
Sbjct:  649 RMKNYTIYAVSITIRIVLGFMLLALIWQFDFPPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKLSEIFATGVVFGSYMAMMTVIFFWVSYKTDFFPRTFGVATLEKTAHDDFRKLASAIYLQVSIISQALIFVTRSRSWSFVERPGIFLMIAFILAQLVATLIAVYANWSF 821

[Close]

BLAST of EY685640 vs. ExPASy Swiss-Prot
Match: PMA2_SOLLC (Plasma membrane ATPase 2 (Fragment) OS=Solanum lycopersicum GN=LHA2 PE=3 SV=1)

HSP 1 Score: 317.39 bits (812), Expect = 7.641e-86
Identity = 156/173 (90.17%), Postives = 169/173 (97.69%), Query Frame = 1

Query:    4 RVRNYTIYAVSITIRIVLGFMLLALIWKFDFPPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKLAEIFTTGIVLGSYLAMMTVIFFWAAYKTDFFPRVFGVATLEKTAHDDFRKLASAIYLQVSTISQALIFVTRSRSWSFVERPGILLLVAFLIAQLIATLIAVYANWSF 522
            R++NYTIYAVSITIRIVLGFMLLALIWKFDFPPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKLAEIFTTG+VLG YLAMMTVIFFWAAY+T FFPRVFGV+TL++TA DDFRKLASAIYLQVSTISQALIFVTRSRSWSFVERPG+LL+VA ++AQL+ATLIAVYA+WSF
Sbjct:  393 RMKNYTIYAVSITIRIVLGFMLLALIWKFDFPPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKLAEIFTTGVVLGGYLAMMTVIFFWAAYETQFFPRVFGVSTLQRTATDDFRKLASAIYLQVSTISQALIFVTRSRSWSFVERPGLLLVVALIVAQLVATLIAVYASWSF 565

[Close]

BLAST of EY685640 vs. ExPASy Swiss-Prot
Match: PMA1_ORYSJ (Plasma membrane ATPase OS=Oryza sativa subsp. japonica GN=Os04g0656100 PE=2 SV=1)

HSP 1 Score: 271.937 bits (694), Expect = 3.682e-72
Identity = 132/173 (76.30%), Postives = 153/173 (88.44%), Query Frame = 1

Query:    4 RVRNYTIYAVSITIRIVLGFMLLALIWKFDFPPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKLAEIFTTGIVLGSYLAMMTVIFFWAAYKTDFFPRVFGVATLEKTAHDDFRKLASAIYLQVSTISQALIFVTRSRSWSFVERPGILLLVAFLIAQLIATLIAVYANWSF 522
            R++NYTIYAVSITIRIVLGF+L+ALIWK+DF PFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKL EIF TGIVLGSYLA+MTVIFFWA +KTDFF   FGV ++  + H+    + SA+YLQVS +SQALIFVTRSRSWSF+ERPG+LL+ AF++AQL+AT +AVYANW F
Sbjct:  641 RMKNYTIYAVSITIRIVLGFLLIALIWKYDFSPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKLKEIFATGIVLGSYLALMTVIFFWAMHKTDFFTDKFGVRSIRNSEHE----MMSALYLQVSIVSQALIFVTRSRSWSFIERPGLLLVTAFMLAQLVATFLAVYANWGF 809

[Close]

BLAST of EY685640 vs. ExPASy Swiss-Prot
Match: PMA3_ARATH (ATPase 3, plasma membrane-type OS=Arabidopsis thaliana GN=AHA3 PE=1 SV=2)

HSP 1 Score: 270.396 bits (690), Expect = 1.071e-71
Identity = 133/173 (76.88%), Postives = 147/173 (84.97%), Query Frame = 1

Query:    4 RVRNYTIYAVSITIRIVLGFMLLALIWKFDFPPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKLAEIFTTGIVLGSYLAMMTVIFFWAAYKTDFFPRVFGVATLEKTAHDDFRKLASAIYLQVSTISQALIFVTRSRSWSFVERPGILLLVAFLIAQLIATLIAVYANWSF 522
            R++NYTIYAVSITIRIV GFML+ALIWKFDF PFMVLIIAILNDGTIMTISKDRVKPSP PDSWKL EIF TG+VLG Y+A+MTV+FFWAAYKTDFFPR F V  L  + H+    + SA+YLQVS +SQALIFVTRSRSWSF ERPG  LL+AF +AQLIAT IAVY NW F
Sbjct:  642 RMKNYTIYAVSITIRIVFGFMLIALIWKFDFSPFMVLIIAILNDGTIMTISKDRVKPSPTPDSWKLKEIFATGVVLGGYMAIMTVVFFWAAYKTDFFPRTFHVRDLRGSEHE----MMSALYLQVSIVSQALIFVTRSRSWSFTERPGYFLLIAFWVAQLIATAIAVYGNWEF 810

[Close]

BLAST of EY685640 vs. ExPASy Swiss-Prot
Match: PMA1_WHEAT (Plasma membrane ATPase OS=Triticum aestivum GN=ha1 PE=2 SV=1)

HSP 1 Score: 270.396 bits (690), Expect = 1.071e-71
Identity = 134/173 (77.46%), Postives = 154/173 (89.02%), Query Frame = 1

Query:    4 RVRNYTIYAVSITIRIVLGFMLLALIWKFDFPPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKLAEIFTTGIVLGSYLAMMTVIFFWAAYKTDFFPRVFGVATLEKTAHDDFRKLASAIYLQVSTISQALIFVTRSRSWSFVERPGILLLVAFLIAQLIATLIAVYANWSF 522
            R++NYTIYAVSITIRIVLGFML+ALIWKFDF PFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKL EIF TG+VLG+YLA++TV+FFW  +KTDFF   FGV ++  T   +F+++ SA+YLQVS +SQALIFVTRSRSWSFVERPG LL+ AFL+AQL+ATLIAVYANW F
Sbjct:  641 RMKNYTIYAVSITIRIVLGFMLIALIWKFDFAPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKLNEIFATGVVLGTYLALVTVVFFWLIHKTDFFTNKFGVESIRNT---EFKEM-SALYLQVSIVSQALIFVTRSRSWSFVERPGFLLVTAFLLAQLVATLIAVYANWDF 809

[Close]

BLAST of EY685640 vs. ExPASy Swiss-Prot
Match: PMA2_ARATH (ATPase 2, plasma membrane-type OS=Arabidopsis thaliana GN=AHA2 PE=1 SV=2)

HSP 1 Score: 268.085 bits (684), Expect = 5.316e-71
Identity = 135/173 (78.03%), Postives = 148/173 (85.55%), Query Frame = 1

Query:    4 RVRNYTIYAVSITIRIVLGFMLLALIWKFDFPPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKLAEIFTTGIVLGSYLAMMTVIFFWAAYKTDFFPRVFGVATLEKTAHDDFRKLASAIYLQVSTISQALIFVTRSRSWSFVERPGILLLVAFLIAQLIATLIAVYANWSF 522
            R++NYTIYAVSITIRIV GFML+ALIW+FDF  FMVLIIAILNDGTIMTISKDRVKPSP PDSWKL EIF TG+VLG Y A+MTVIFFWAA+KTDFF   FGV ++    H+    L  A+YLQVS ISQALIFVTRSRSWSFVERPG LL++AFLIAQLIATLIAVYANW F
Sbjct:  641 RMKNYTIYAVSITIRIVFGFMLIALIWEFDFSAFMVLIIAILNDGTIMTISKDRVKPSPTPDSWKLKEIFATGVVLGGYQAIMTVIFFWAAHKTDFFSDTFGVRSIRDNNHE----LMGAVYLQVSIISQALIFVTRSRSWSFVERPGALLMIAFLIAQLIATLIAVYANWEF 809

The following BLAST results are available for this feature:

BLAST of EY685640 vs. ExPASy Swiss-Prot

BLAST of EY685640 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 22


Match Name	E-value	Identity	Description
PMA3_NICPL	1.819e-87	92.49	Plasma membrane ATPase 3 OS=Nicotiana plumbaginifo...	[more]
PMA1_SOLLC	1.819e-87	91.91	Plasma membrane ATPase 1 OS=Solanum lycopersicum G...	[more]
PMA11_ARATH	3.102e-87	90.75	ATPase 11, plasma membrane-type OS=Arabidopsis tha...	[more]
PMA1_NICPL	6.911e-87	92.49	Plasma membrane ATPase 1 OS=Nicotiana plumbaginifo...	[more]
PMA4_ARATH	1.540e-86	89.60	ATPase 4, plasma membrane-type OS=Arabidopsis thal...	[more]
PMA2_SOLLC	7.641e-86	90.17	Plasma membrane ATPase 2 (Fragment) OS=Solanum lyc...	[more]
PMA1_ORYSJ	3.682e-72	76.30	Plasma membrane ATPase OS=Oryza sativa subsp. japo...	[more]
PMA3_ARATH	1.071e-71	76.88	ATPase 3, plasma membrane-type OS=Arabidopsis thal...	[more]
PMA1_WHEAT	1.071e-71	77.46	Plasma membrane ATPase OS=Triticum aestivum GN=ha1...	[more]
PMA2_ARATH	5.316e-71	78.03	ATPase 2, plasma membrane-type OS=Arabidopsis thal...	[more]

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Properties


Property Name	Value
Genbank description	CS00-C2-003-024-B12-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>EY685640 ID=EY685640; Name=EY685640; organism=Citrus sinensis; type=EST; length=950bp
CCACGCGTCCGAAATTACACAATATATGCAGTCTCTATTACCATTCGTAT
TGTGCTTGGTTTCATGCTGCTGGCGCTCATATGGAAGTTTGACTTTCCTC
CATTTATGGTGCTTATCATTGCCATCCTGAATGATGGTACAATTATGACA
ATATCAAAAGATAGGGTGAAACCGTCTCCTCTGCCAGATAGCTGGAAGCT
TGCTGAAATTTTTACAACTGGCATTGTTCTTGGCAGTTACTTGGCAATGA
TGACAGTTATTTTCTTCTGGGCAGCATATAAAACAGATTTCTTTCCGAGA
GTATTTGGGGTGGCAACCCTTGAGAAAACAGCTCATGATGACTTCCGAAA
GCTTGCCTCAGCAATTTACTTGCAAGTGAGCACTATCAGTCAGGCCCTTA
TATTCGTAACACGGTCAAGAAGTTGGTCTTTCGTTGAGCGACCTGGTATA
TTGCTGCTTGTGGCTTTTCTGATTGCTCAACTGATTGCTACTCTGATTGC
CGTTTATGCAAACTGGAGTTTTGCTGCAATTGAAGGGATTGGGTGGGGTT
GGGCCGGAGTGGCCTAGACCTAACAAACTCATCTTCCTCATAGACAATTG
TACTCATCACAAACATTCTAAACACTAACTTCTCGAGAGCGAAAGGCCGG
CTCTACTTGACACCCCACTACGTCTCGCATCCCACACCCCCCTCAGTTAT
CCAAAGGCAAACCACACAAAACACTCTACCCCGAACTGATAACAAGCAGA
ACAGAATAACAGGGCGAGACACCGACGCTATTAGTAGAACCACCGCTCAC
AAGAATCTAGAACTGACCCGTCACCAACCAACTAACCAACCACCAGTACA
CCAACCACTACAAACCTAAAAGCCCACCCACAAGTACACAGACAAAATAC
CACAAATAGGACCAACAGACCAAATCAATCCTATAGTCAACGAACACCTA