EY685639

Overview
NameEY685639
Unique NameEY685639
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length861
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY685639 vs. ExPASy Swiss-Prot
Match: YIPC_SCHPO (Uncharacterized WD repeat-containing protein C343.04c OS=Schizosaccharomyces pombe GN=SPAC343.04c PE=2 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 1.651e-28
Identity = 75/199 (37.69%), Postives = 103/199 (51.76%), Query Frame = 1
Query:    1 GECLHVYEKTGVGLISCGWFLDGGGIFAGMTDKSICLWDLDGRELESWKGQKTLRISDMAITDDGKRIISICREAAILLLDREANFE--------RWIEEEEVITSFSLSKDNKYLLVNLINQEIHLWSIESDPKLVSRYKGHKRARFVIRSCFGGFEQAFIASGSEDSQVYIWHRYTGELVLALAGHSGSVNCVTWNP 573
            GE L  Y K G  +  C W  DG     G  D  I  W L+G  L  W+    + I DMA+T DG ++  +  E  I   D+             + I  +  +TS  LSKD+KY L NL      LW +E + ++V +Y GHK   F+I SCFGG +  F+ SGSED ++ IWHR +G+L+  L+GH   VN V +NP
Sbjct:  287 GEKLRDY-KHGFSVSCCCWLPDGLSFITGSPDCHITHWSLNGEILYKWED---VNIYDMALTSDGTKLYIVGFEQLINAEDKHIAIYSVETRECIKKISLQSKVTSICLSKDSKYALTNLEPHTTFLWDLEEN-RIVRQYMGHKLGNFLIGSCFGGKDDTFVLSGSEDDKIRIWHRESGKLLATLSGHVKCVNYVAYNP 480          
BLAST of EY685639 vs. ExPASy Swiss-Prot
Match: WDR26_DROME (WD repeat-containing protein 26 homolog OS=Drosophila melanogaster GN=CG7611 PE=1 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 1.825e-27
Identity = 71/184 (38.59%), Postives = 106/184 (57.61%), Query Frame = 1
Query:   43 ISCGWFL-DGGGIFAGMTDKSICLWDLDGRELESWKGQKTLRISDMAITDDGKRIISICREAAILLLDREANFER------WIEEEEVITSFSLSKDNKYLLVNLINQEIHLWSIESDPKLVSRYKGHKRARFVIRSCFGGFEQAFIASGSEDSQVYIWHRYTGELVLALAGHSGSVNCVTWNP 573
            ++CG F  DG     G     + L DL+G  ++SW+G   +R++ +A   D K I++      I    R  NF+        + E   I +FS++  ++  L+N+ NQ +HLW IE D  LV R++G +++ F I SCFGG  ++F+ASGSED  VYIWH    E +  LAGH+ +VNCV+WNP
Sbjct:  409 LACGAFSRDGARFVCGGQKGQLYLCDLNGTIVDSWEG---VRVNSIAFRADNKTILAADNHYRI----RGYNFDSPRSDFDILREPHPIMTFSINSADRLALLNVSNQGLHLWDIE-DKCLVRRFQGIRQSNFAIHSCFGGVNESFVASGSEDKVVYIWHIKREEPLAKLAGHTKTVNCVSWNP 584          
BLAST of EY685639 vs. ExPASy Swiss-Prot
Match: WDR26_HUMAN (WD repeat-containing protein 26 OS=Homo sapiens GN=WDR26 PE=1 SV=3)

HSP 1 Score: 122.094 bits (305), Expect = 4.066e-27
Identity = 69/183 (37.70%), Postives = 101/183 (55.19%), Query Frame = 1
Query:   40 LISCGWFLDGGGIFAGMTDKSICLWDLDGRELESWKGQKTLRISDMAITDDGKRIISICREAAILLLDREANFE-----RWIEEEEVITSFSLSKDNKYLLVNLINQEIHLWSIESDPKLVSRYKGHKRARFVIRSCFGGFEQAFIASGSEDSQVYIWHRYTGELVLALAGHSGSVNCVTWNP 573
            L S  W  DG     G         DLDG  L+SW+G   +R+  +    DGK +++      I    R  NFE       ++E+  I SF++SK+ +  L+N+  Q +HLW ++ D  LV +Y+G  +  + I SCFGG  + FIASGSED +VYIWH+ +   +  L GH+ +VNCV+WNP
Sbjct:  449 LTSVAWNPDGKRFVTGGQRGQFYQCDLDGNLLDSWEG---VRVQCLWCLSDGKTVLASDTHQRI----RGYNFEDLTDRNIVQEDHPIMSFTISKNGRLALLNVATQGVHLWDLQ-DRVLVRKYQGVTQGFYTIHSCFGGHNEDFIASGSEDHKVYIWHKRSELPIAELTGHTRTVNCVSWNP 623          
BLAST of EY685639 vs. ExPASy Swiss-Prot
Match: WDR26_MOUSE (WD repeat-containing protein 26 OS=Mus musculus GN=Wdr26 PE=1 SV=2)

HSP 1 Score: 121.709 bits (304), Expect = 5.310e-27
Identity = 68/183 (37.16%), Postives = 101/183 (55.19%), Query Frame = 1
Query:   40 LISCGWFLDGGGIFAGMTDKSICLWDLDGRELESWKGQKTLRISDMAITDDGKRIISICREAAILLLDREANFE-----RWIEEEEVITSFSLSKDNKYLLVNLINQEIHLWSIESDPKLVSRYKGHKRARFVIRSCFGGFEQAFIASGSEDSQVYIWHRYTGELVLALAGHSGSVNCVTWNP 573
            L S  W  DG     G         DLDG  L+SW+G   +R+  +    DGK +++      +    R  NFE       ++E+  I SF++SK+ +  L+N+  Q +HLW ++ D  LV +Y+G  +  + I SCFGG  + FIASGSED +VYIWH+ +   +  L GH+ +VNCV+WNP
Sbjct:  429 LTSVAWNPDGKRFVTGGQRGQFYQCDLDGNLLDSWEG---VRVQCLWCLSDGKTVLASDTHQRV----RGYNFEDLTDRNIVQEDHPIMSFTISKNGRLALLNVATQGVHLWDLQ-DRVLVRKYQGVTQGFYTIHSCFGGHNEDFIASGSEDHKVYIWHKRSELPIAELTGHTRTVNCVSWNP 603          
BLAST of EY685639 vs. ExPASy Swiss-Prot
Match: WDR26_XENTR (WD repeat-containing protein 26 OS=Xenopus tropicalis GN=wdr26 PE=2 SV=2)

HSP 1 Score: 120.553 bits (301), Expect = 1.183e-26
Identity = 67/183 (36.61%), Postives = 101/183 (55.19%), Query Frame = 1
Query:   40 LISCGWFLDGGGIFAGMTDKSICLWDLDGRELESWKGQKTLRISDMAITDDGKRIISICREAAILLLDREANFE-----RWIEEEEVITSFSLSKDNKYLLVNLINQEIHLWSIESDPKLVSRYKGHKRARFVIRSCFGGFEQAFIASGSEDSQVYIWHRYTGELVLALAGHSGSVNCVTWNP 573
            L S  W  DG     G         DLDG  L+SW+G   +R+  +    DGK +++      I    R  NFE       ++E+  I SF++S++ +  L+N+  Q +HLW ++ D  LV +Y+G  +  + I SCFGG  + FIASGSED +VY+WH+ +   +  L GH+ +VNCV+WNP
Sbjct:  402 LTSVAWNPDGKRFVTGGQRGQFYQCDLDGNLLDSWEG---VRVQCLWCLSDGKTVLASDTHQRI----RGYNFEDLTDRNIVQEDHPIMSFTISRNGRLALLNVATQGVHLWDLQ-DRVLVRKYQGVTQGFYTIHSCFGGHNEDFIASGSEDHKVYVWHKRSELPIAELTGHTRTVNCVSWNP 576          
BLAST of EY685639 vs. ExPASy Swiss-Prot
Match: WDR26_DANRE (WD repeat-containing protein 26 OS=Danio rerio GN=wdr26 PE=1 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 1.183e-26
Identity = 68/179 (37.99%), Postives = 101/179 (56.42%), Query Frame = 1
Query:   40 LISCGWFLDGGGIFAGMTDKSICLWDLDGRELESWKGQKTLRISDMAITDDGKRIISICREAAILLLDREANFERWI-EEEEVITSFSLSKDNKYLLVNLINQEIHLWSIESDPKLVSRYKGHKRARFVIRSCFGGFEQAFIASGSEDSQVYIWHRYTGELVLALAGHSGSVNCVTWNP 573
            L S  W  DG     G         DLDG  LESW+G   +R+  +    DG+ +++      I     E   +R I +E+  I SF++SK+ +  L+N+  Q +HLW ++ D  LV +Y+G  +  + I SCFGG  + FIASGSED +VYIWH+ +   ++ L GH+ +VNCV+WNP
Sbjct:  361 LTSVAWNPDGKRFVTGGQRGQFYQCDLDGNLLESWEG---VRVQCLWCMGDGRTVLASDTHQRIRGYSFEDLTDRNIVQEDHPIMSFTVSKNGRLALLNVATQGVHLWDLQ-DRVLVRKYQGVTQGFYTIHSCFGGHNEDFIASGSEDHKVYIWHKRSELPIVELTGHTRTVNCVSWNP 535          
BLAST of EY685639 vs. ExPASy Swiss-Prot
Match: YZLL_CAEEL (Uncharacterized WD repeat-containing protein K04G11.4 OS=Caenorhabditis elegans GN=K04G11.4 PE=2 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 9.723e-13
Identity = 52/196 (26.53%), Postives = 94/196 (47.96%), Query Frame = 1
Query:    1 GECLHVYEKTGVGLISCGWFLDGGGIFAGMTDKSICLWDL-DGRELESWKGQKTLRISDMAITDDGKRIISICREAAILLLDREAN--FERWIEEEEV-ITSFSLSKDNKYLLVNLINQEIHLWSIESDPKLVSRYKGHKRARFVIRSCFGGFEQAFIASGSEDSQVYIWHRYTGELVLALAGHSGSVNCVTWNPG 576
            G C+   +     +  C +   G  I +G  D++I +W   +G  + S  G +   +S +    DG  + S   +  + + D       +  I+EE   IT    S + KY+L + +N  + LW  +   +++  Y GH+ +++ + + F      +I SGSED +VYIW+  T E++  L GH+ +V C   +PG
Sbjct:  180 GRCVKTLKGHTNYVFCCCFNPSGTLIASGSFDETIRIWCARNGNTIFSIPGHED-PVSSVCFNRDGAYLASGSYDGIVRIWDSTTGTCVKTLIDEEHPPITHVKFSPNGKYILASNLNNTLKLWDYQK-LRVLKEYTGHENSKYCVAANFSVTGGKWIVSGSEDHKVYIWNLQTREILQTLDGHNTAVMCTDCHPG 373          
BLAST of EY685639 vs. ExPASy Swiss-Prot
Match: WDS_DROME (Protein will die slowly OS=Drosophila melanogaster GN=wds PE=2 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 8.231e-12
Identity = 51/174 (29.31%), Postives = 84/174 (48.28%), Query Frame = 1
Query:   76 IFAGMTDKSICLWDLDGRELESWKGQKTLR-----ISDMAITDDGKRIISICREAAILLLDREAN--FERWIEEEEVITSF-SLSKDNKYLLVNLINQEIHLWSIESDPKLVSRYKGHKRARFVIRSCFGGFEQAFIASGSEDSQVYIWHRYTGELVLALAGHSGSVNCVTWNP 573
            I +G  D+S+ +WD+      + K  KTL      +S +    DG  I+S   +    + D  +    +  I+++    SF   S + KY+L   ++  + LW   S  K +  Y GHK  ++ I + F      +I SGSED+ VYIW+  + E+V  L GH+ +V C   +P
Sbjct:  171 IVSGSFDESVRIWDV-----RTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDY-SKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNMVYIWNLQSKEVVQKLQGHTDTVLCTACHP 338          
BLAST of EY685639 vs. ExPASy Swiss-Prot
Match: WDR5_RAT (WD repeat-containing protein 5 OS=Rattus norvegicus GN=Wdr5 PE=2 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 8.231e-12
Identity = 55/199 (27.64%), Postives = 91/199 (45.73%), Query Frame = 1
Query:    1 GECLHVYEKTGVGLISCGWFLDGGGIFAGMTDKSICLWDLDGRELESWKGQKTLR-----ISDMAITDDGKRIISICREAAILLLDREAN--FERWIEEEEVITSF-SLSKDNKYLLVNLINQEIHLWSIESDPKLVSRYKGHKRARFVIRSCFGGFEQAFIASGSEDSQVYIWHRYTGELVLALAGHSGSVNCVTWNP 573
            G+CL   +     +  C +      I +G  D+S+ +WD+     ++ K  KTL      +S +    DG  I+S   +    + D  +    +  I+++    SF   S + KY+L   ++  + LW   S  K +  Y GHK  ++ I + F      +I SGSED+ VYIW+  T E+V  L GH+  V     +P
Sbjct:  119 GKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDV-----KTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDY-SKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHP 311          
BLAST of EY685639 vs. ExPASy Swiss-Prot
Match: WDR5_MOUSE (WD repeat-containing protein 5 OS=Mus musculus GN=Wdr5 PE=2 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 8.231e-12
Identity = 55/199 (27.64%), Postives = 91/199 (45.73%), Query Frame = 1
Query:    1 GECLHVYEKTGVGLISCGWFLDGGGIFAGMTDKSICLWDLDGRELESWKGQKTLR-----ISDMAITDDGKRIISICREAAILLLDREAN--FERWIEEEEVITSF-SLSKDNKYLLVNLINQEIHLWSIESDPKLVSRYKGHKRARFVIRSCFGGFEQAFIASGSEDSQVYIWHRYTGELVLALAGHSGSVNCVTWNP 573
            G+CL   +     +  C +      I +G  D+S+ +WD+     ++ K  KTL      +S +    DG  I+S   +    + D  +    +  I+++    SF   S + KY+L   ++  + LW   S  K +  Y GHK  ++ I + F      +I SGSED+ VYIW+  T E+V  L GH+  V     +P
Sbjct:  119 GKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDV-----KTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDY-SKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHP 311          
The following BLAST results are available for this feature:
BLAST of EY685639 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 14
Match NameE-valueIdentityDescription
YIPC_SCHPO1.651e-2837.69Uncharacterized WD repeat-containing protein C343.... [more]
WDR26_DROME1.825e-2738.59WD repeat-containing protein 26 homolog OS=Drosoph... [more]
WDR26_HUMAN4.066e-2737.70WD repeat-containing protein 26 OS=Homo sapiens GN... [more]
WDR26_MOUSE5.310e-2737.16WD repeat-containing protein 26 OS=Mus musculus GN... [more]
WDR26_XENTR1.183e-2636.61WD repeat-containing protein 26 OS=Xenopus tropica... [more]
WDR26_DANRE1.183e-2637.99WD repeat-containing protein 26 OS=Danio rerio GN=... [more]
YZLL_CAEEL9.723e-1326.53Uncharacterized WD repeat-containing protein K04G1... [more]
WDS_DROME8.231e-1229.31Protein will die slowly OS=Drosophila melanogaster... [more]
WDR5_RAT8.231e-1227.64WD repeat-containing protein 5 OS=Rattus norvegicu... [more]
WDR5_MOUSE8.231e-1227.64WD repeat-containing protein 5 OS=Mus musculus GN=... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C2-003-024-B11-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY685639 ID=EY685639; Name=EY685639; organism=Citrus sinensis; type=EST; length=861bp
GGAGAATGTCTCCATGTTTACGAGAAAACTGGTGTTGGCCTGATTTCTTG
TGGATGGTTTCTAGATGGTGGAGGAATTTTTGCTGGAATGACTGACAAGA
GCATCTGCCTGTGGGATTTGGATGGAAGAGAGCTGGAATCTTGGAAAGGG
CAGAAGACTCTAAGAATATCAGACATGGCTATAACTGATGATGGAAAGAG
AATAATAAGCATATGCAGAGAAGCTGCTATTCTCTTGCTTGACAGGGAAG
CTAATTTTGAGAGGTGGATTGAAGAGGAGGAAGTTATCACTTCATTTTCA
TTATCAAAAGATAACAAATACCTGCTGGTTAATCTTATAAACCAAGAAAT
CCATCTCTGGAGCATAGAAAGTGATCCCAAACTTGTTTCAAGGTACAAAG
GTCACAAACGTGCTCGATTTGTTATTCGATCTTGTTTTGGTGGATTTGAA
CAAGCATTTATTGCCAGTGGGAGTGAGGATTCACAGGTGTATATATGGCA
TAGATACACAGGAGAGCTCGTTTTGGCATTGGCAGGACATTCTGGGTCAG
TTAATTGTGTGACCTGGAATCCGGGCAATCTTCCACATGCTGGCTTCGGC
CAGTGATGATCCGTACAATTCCAATATGGGGGCTTACCATCAGACCCCTA
TGAAGCCTATAGACCCGAGCAATGGCATTTGTTACCCTCTGCATGGGAAA
ATCTTAACACCTTGCATAAACCCAACTTTCCTTGAATCCCCCCACTACCG
GAATGGTTCCCCTTCGGCACCTTTCGGCTCCGCGTAAATCTCTCACAAAA
GATTTCGCTAAAGTAACGCCGAAGTCCGCGGCAAAGCGACAACCATACCA
AGAGTAAACAA
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