EY685632

Overview
NameEY685632
Unique NameEY685632
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length749
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY685632 vs. ExPASy Swiss-Prot
Match: GCSP2_ARATH (Glycine dehydrogenase [decarboxylating] 2, mitochondrial OS=Arabidopsis thaliana GN=At4g33010 PE=1 SV=2)

HSP 1 Score: 150.984 bits (380), Expect = 6.508e-36
Identity = 76/97 (78.35%), Postives = 83/97 (85.57%), Query Frame = 1
Query:    1 TIAQRVHGLAGTFALGLKKLGTVEVQGLPFFDTVKVKCADAHAIASAAYKIEMNLRVVDSNTVTASFDETTTLEDVDKLFLVFAGGKSVPFPAASLA 291
            +IAQRVHGLAG F+LGL KLG  EVQ LPFFDTVK+KC+DAHAIA AA K E+NLRVVDS T+TASFDETTTL+DVDKLF VFA GK VPF A SLA
Sbjct:  426 SIAQRVHGLAGIFSLGLNKLGVAEVQELPFFDTVKIKCSDAHAIADAASKSEINLRVVDSTTITASFDETTTLDDVDKLFKVFASGKPVPFTAESLA 522          
BLAST of EY685632 vs. ExPASy Swiss-Prot
Match: GCSP_SOLTU (Glycine dehydrogenase [decarboxylating], mitochondrial OS=Solanum tuberosum GN=GDCSP PE=2 SV=1)

HSP 1 Score: 149.443 bits (376), Expect = 1.893e-35
Identity = 78/112 (69.64%), Postives = 89/112 (79.46%), Query Frame = 1
Query:    1 TIAQRVHGLAGTFALGLKKLGTVEVQGLPFFDTVKVKCADAHAIASAAYKIEMNLRVVDSNTVTASFDETTTLEDVDKLFLVFAGGKSVPFPAASLAKKRETDNHRGTT*DT 336
            TI QRVHGLAGTF+ GLKKLGTVEVQ LPFFDTVKVKC+DA AIA  A K ++NLR+VD+NT+T SFDETTTLEDVD LF VFA GK VPF A S+A++ E     G T +T
Sbjct:  423 TIGQRVHGLAGTFSAGLKKLGTVEVQDLPFFDTVKVKCSDAKAIADVANKNDINLRIVDNNTITVSFDETTTLEDVDDLFKVFALGKPVPFTAQSIAQEVENLIPSGLTRET 534          
BLAST of EY685632 vs. ExPASy Swiss-Prot
Match: GCSP_FLATR (Glycine dehydrogenase [decarboxylating], mitochondrial OS=Flaveria trinervia GN=GDCSPA PE=3 SV=1)

HSP 1 Score: 145.206 bits (365), Expect = 3.571e-34
Identity = 73/97 (75.26%), Postives = 82/97 (84.54%), Query Frame = 1
Query:    1 TIAQRVHGLAGTFALGLKKLGTVEVQGLPFFDTVKVKCADAHAIASAAYKIEMNLRVVDSNTVTASFDETTTLEDVDKLFLVFAGGKSVPFPAASLA 291
            TIA+RVHGLAGTFA GLKKLGTV+VQ LPFFDTVKV CAD+ AIA  AYK +MNLR+VD NT+T +FDETTT+EDVD LF VFA GK V F AAS+A
Sbjct:  422 TIAKRVHGLAGTFAAGLKKLGTVQVQDLPFFDTVKVTCADSKAIAEEAYKHKMNLRIVDKNTITVAFDETTTIEDVDTLFKVFALGKPVTFTAASIA 518          
BLAST of EY685632 vs. ExPASy Swiss-Prot
Match: GCSP_FLAAN (Glycine dehydrogenase [decarboxylating], mitochondrial OS=Flaveria anomala GN=GDCSP PE=3 SV=1)

HSP 1 Score: 144.821 bits (364), Expect = 4.664e-34
Identity = 73/97 (75.26%), Postives = 82/97 (84.54%), Query Frame = 1
Query:    1 TIAQRVHGLAGTFALGLKKLGTVEVQGLPFFDTVKVKCADAHAIASAAYKIEMNLRVVDSNTVTASFDETTTLEDVDKLFLVFAGGKSVPFPAASLA 291
            TIA+RVHGLAGTFA GLKKLGTV+VQ LPFFDTVKV CAD+ AIA  A K +MNLR+VD NT+T +FDETTT+EDVD LF VFA GK VPF AAS+A
Sbjct:  422 TIAKRVHGLAGTFAAGLKKLGTVQVQDLPFFDTVKVTCADSKAIAEEACKHKMNLRIVDKNTITVAFDETTTIEDVDTLFKVFALGKPVPFTAASIA 518          
BLAST of EY685632 vs. ExPASy Swiss-Prot
Match: GCSPB_FLAPR (Glycine dehydrogenase [decarboxylating] B, mitochondrial OS=Flaveria pringlei GN=GDCSPB PE=3 SV=1)

HSP 1 Score: 144.821 bits (364), Expect = 4.664e-34
Identity = 73/97 (75.26%), Postives = 82/97 (84.54%), Query Frame = 1
Query:    1 TIAQRVHGLAGTFALGLKKLGTVEVQGLPFFDTVKVKCADAHAIASAAYKIEMNLRVVDSNTVTASFDETTTLEDVDKLFLVFAGGKSVPFPAASLA 291
            TIA+RVHGLAGTFA GLKKLGTV+VQ LPFFDTVKV CAD+ AIA  AYK +MNLR+VD NT+T +FDETTT+EDVD LF VFA GK V F AAS+A
Sbjct:  422 TIAKRVHGLAGTFASGLKKLGTVQVQDLPFFDTVKVTCADSKAIAEEAYKHKMNLRIVDKNTITVAFDETTTIEDVDTLFKVFALGKPVTFTAASIA 518          
BLAST of EY685632 vs. ExPASy Swiss-Prot
Match: GCSPA_FLAPR (Glycine dehydrogenase [decarboxylating] A, mitochondrial OS=Flaveria pringlei GN=GDCSPA PE=2 SV=1)

HSP 1 Score: 143.665 bits (361), Expect = 1.039e-33
Identity = 72/97 (74.23%), Postives = 81/97 (83.51%), Query Frame = 1
Query:    1 TIAQRVHGLAGTFALGLKKLGTVEVQGLPFFDTVKVKCADAHAIASAAYKIEMNLRVVDSNTVTASFDETTTLEDVDKLFLVFAGGKSVPFPAASLA 291
            TIA+RVHGLAGTFA GLKKLGTV+VQ LPFFDTVKV C D+ AIA  AYK +MNLR+VD NT+T +FDETTT+EDVD LF VFA GK V F AAS+A
Sbjct:  425 TIAKRVHGLAGTFAAGLKKLGTVQVQDLPFFDTVKVTCVDSKAIAEEAYKHKMNLRIVDKNTITVAFDETTTIEDVDTLFKVFALGKPVTFTAASIA 521          
BLAST of EY685632 vs. ExPASy Swiss-Prot
Match: GCSP1_ARATH (Glycine dehydrogenase [decarboxylating] 1, mitochondrial OS=Arabidopsis thaliana GN=GDCSP PE=1 SV=1)

HSP 1 Score: 140.584 bits (353), Expect = 8.795e-33
Identity = 72/97 (74.23%), Postives = 80/97 (82.47%), Query Frame = 1
Query:    1 TIAQRVHGLAGTFALGLKKLGTVEVQGLPFFDTVKVKCADAHAIASAAYKIEMNLRVVDSNTVTASFDETTTLEDVDKLFLVFAGGKSVPFPAASLA 291
            +IAQRVHGLAG FALGLKKLGT +VQ LPFFDTVKV C+DA AI   A K E+NLR+VDSNT+T +FDETTTL+DVDKLF VFA GK V F A SLA
Sbjct:  432 SIAQRVHGLAGVFALGLKKLGTAQVQDLPFFDTVKVTCSDATAIFDVAAKKEINLRLVDSNTITVAFDETTTLDDVDKLFEVFASGKPVQFTAESLA 528          
BLAST of EY685632 vs. ExPASy Swiss-Prot
Match: GCSP_PEA (Glycine dehydrogenase [decarboxylating], mitochondrial OS=Pisum sativum GN=GDCSP PE=1 SV=1)

HSP 1 Score: 140.198 bits (352), Expect = 1.149e-32
Identity = 76/96 (79.17%), Postives = 82/96 (85.42%), Query Frame = 1
Query:    4 IAQRVHGLAGTFALGLKKLGTVEVQGLPFFDTVKVKCADAHAIASAAYKIEMNLRVVDSNTVTASFDETTTLEDVDKLFLVFAGGKSVPFPAASLA 291
            IAQRVHGLAG FALGLKKLG +EVQ L FFDTVKVK ++A AIA AA K E+NLRVVD NT+TA+FDETTTLEDVDKLF VFAGGK V F AASLA
Sbjct:  446 IAQRVHGLAGVFALGLKKLG-LEVQDLGFFDTVKVKTSNAKAIADAAIKSEINLRVVDGNTITAAFDETTTLEDVDKLFKVFAGGKPVSFTAASLA 540          
BLAST of EY685632 vs. ExPASy Swiss-Prot
Match: GCSP_HAHCH (Glycine dehydrogenase [decarboxylating] OS=Hahella chejuensis (strain KCTC 2396) GN=gcvP PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 3.252e-11
Identity = 44/89 (49.44%), Postives = 52/89 (58.43%), Query Frame = 1
Query:    4 IAQRVHGLAGTFALGLKKLGTVEVQGLPFFDTVKVKCA-DAHAIASAAYKIEMNLRVVDSNTVTASFDETTTLEDVDKLFLVFAGGKSV 267
            IA+RVH L    A GLK+ G   V    FFDTV V    D  A+  AA + ++NLR +D NT+  S DETTT EDV  L  VFA GK V
Sbjct:  363 IARRVHRLTTILAEGLKQAGR-SVNTAHFFDTVSVATGGDTDAVYQAALQQKINLRRIDDNTLGVSLDETTTREDVAALLHVFASGKPV 450          
BLAST of EY685632 vs. ExPASy Swiss-Prot
Match: GCSP_ANASP (Glycine dehydrogenase [decarboxylating] OS=Anabaena sp. (strain PCC 7120) GN=gcvP PE=3 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 9.462e-11
Identity = 38/92 (41.30%), Postives = 55/92 (59.78%), Query Frame = 1
Query:    4 IAQRVHGLAGTFALGLKKLGTVEVQGLPFFDTVKVKCADA--HAIASAAYKIEMNLRVVDSNTVTASFDETTTLEDVDKLFLVFAGGKSVPF 273
            IA+R+H L     + L++LG   +    FFDT+++K  +     I  AA    +NLR+VD++TV  S DETTTLEDV  +  +FAG   +PF
Sbjct:  379 IAERIHHLTLVLGVWLQRLGYT-ITSQSFFDTLQIKLGEKPLQEILEAAEAYRINLRIVDTSTVGISLDETTTLEDVKDICRIFAGTDELPF 469          
The following BLAST results are available for this feature:
BLAST of EY685632 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 10
Match NameE-valueIdentityDescription
GCSP2_ARATH6.508e-3678.35Glycine dehydrogenase [decarboxylating] 2, mitocho... [more]
GCSP_SOLTU1.893e-3569.64Glycine dehydrogenase [decarboxylating], mitochond... [more]
GCSP_FLATR3.571e-3475.26Glycine dehydrogenase [decarboxylating], mitochond... [more]
GCSP_FLAAN4.664e-3475.26Glycine dehydrogenase [decarboxylating], mitochond... [more]
GCSPB_FLAPR4.664e-3475.26Glycine dehydrogenase [decarboxylating] B, mitocho... [more]
GCSPA_FLAPR1.039e-3374.23Glycine dehydrogenase [decarboxylating] A, mitocho... [more]
GCSP1_ARATH8.795e-3374.23Glycine dehydrogenase [decarboxylating] 1, mitocho... [more]
GCSP_PEA1.149e-3279.17Glycine dehydrogenase [decarboxylating], mitochond... [more]
GCSP_HAHCH3.252e-1149.44Glycine dehydrogenase [decarboxylating] OS=Hahella... [more]
GCSP_ANASP9.462e-1141.30Glycine dehydrogenase [decarboxylating] OS=Anabaen... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C2-003-024-B03-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY685632 ID=EY685632; Name=EY685632; organism=Citrus sinensis; type=EST; length=749bp
ACCATTGCTCAAAGAGTCCATGGACTAGCCGGGACTTTCGCCCTTGGGTT
AAAAAAGCTGGGGACAGTGGAAGTCCAGGGGCTTCCCTTCTTTGACACTG
TGAAGGTGAAGTGTGCGGATGCACATGCCATTGCCAGTGCTGCTTACAAG
ATTGAAATGAATCTTCGGGTTGTAGATTCCAACACCGTCACTGCTTCCTT
TGATGAAACAACCACCTTGGAGGATGTTGATAAGCTTTTCCTAGTTTTCG
CTGGGGGCAAATCAGTTCCATTCCCTGCTGCATCTCTGGCTAAAAAGCGA
GAGACAGACAATCACCGAGGCACAACATAGGACACTTCGGATCCTGAGCA
ACACTGCCGTCAACCCACTCGCTCCCCCAACCTCGCCCAGCGACAAAAAC
AACATCGCCAACGCAACACCAAACTCCAACAAAACACACAACAGTAACTA
CATAGCACACCAACCCGGACAAAAGCAACGCAGCAAGTAGCACCACCCAC
CGCAAAGCCCGACCCCCTCCAGCTACACCACAGAGCTACGCCCAAGACAA
GCCCAGACCACCCCCAACAATCAACCCCAGCCGCGTCGCCAGGACGCAAG
CCACGACAGCCACCTAACACTTACATACACAGCGCCACAGACAAACCAGC
GCACACACCACACACCCACGCCTTAAGAAAATCAAACAACCAGTGAAGAC
CAACAAGAGCCTACAACGCCCAAGAACGTAAACACACAAAAGAAAGAAA
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