EY685629

Overview
NameEY685629
Unique NameEY685629
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length824
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY685629 vs. ExPASy Swiss-Prot
Match: NAC3_RAT (Sodium/calcium exchanger 3 OS=Rattus norvegicus GN=Slc8a3 PE=2 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 2.635e-20
Identity = 54/145 (37.24%), Postives = 83/145 (57.24%), Query Frame = 1
Query:  205 LLVPWRVLFAFVPPYHIAHGWIAFICSLIFISGIAYIVTKLTDIISCVTGINAYVIAFTALASGTSWPDLVASKIAAERQITADSAIANITCSNSVNIYVGIGIPWLIDTAYNFIVYKEPLRVQNAEGLSFSLLVFFCTSGGCIA 639
            L V W+VLFA VPP    HGW  F+ S++ I  +  I+  L     C  G+   V A   +A GTS PD  ASK AA + + AD++I N+T SN+VN+++GIG+ W +   Y + +  +   V +A  L+FS+ +F   +  C++
Sbjct:  735 LTVFWKVLFACVPPTEYCHGWACFVVSILIIGMLTAIIGDLASHFGCTIGLKDSVTAVVFVAFGTSVPDTFASKAAALQDVYADASIGNVTGSNAVNVFLGIGLAWSVAAIY-WAMQGQEFHV-SAGTLAFSVTLFTIFAFVCLS 877          
BLAST of EY685629 vs. ExPASy Swiss-Prot
Match: NAC3_HUMAN (Sodium/calcium exchanger 3 OS=Homo sapiens GN=SLC8A3 PE=2 SV=2)

HSP 1 Score: 98.5969 bits (244), Expect = 4.495e-20
Identity = 55/145 (37.93%), Postives = 82/145 (56.55%), Query Frame = 1
Query:  205 LLVPWRVLFAFVPPYHIAHGWIAFICSLIFISGIAYIVTKLTDIISCVTGINAYVIAFTALASGTSWPDLVASKIAAERQITADSAIANITCSNSVNIYVGIGIPWLIDTAYNFIVYKEPLRVQNAEGLSFSLLVFFCTSGGCIA 639
            L V W+VLFA VPP    HGW  F  S++ I  +  I+  L     C  G+   V A   +A GTS PD  ASK AA + + AD++I N+T SN+VN+++GIG+ W +   Y + +  +   V +A  L+FS+ +F   +  CI+
Sbjct:  735 LTVFWKVLFACVPPTEYCHGWACFAVSILIIGMLTAIIGDLASHFGCTIGLKDSVTAVVFVAFGTSVPDTFASKAAALQDVYADASIGNVTGSNAVNVFLGIGLAWSVAAIY-WALQGQEFHV-SAGTLAFSVTLFTIFAFVCIS 877          
BLAST of EY685629 vs. ExPASy Swiss-Prot
Match: NAC2_HUMAN (Sodium/calcium exchanger 2 OS=Homo sapiens GN=SLC8A2 PE=2 SV=2)

HSP 1 Score: 96.6709 bits (239), Expect = 1.708e-19
Identity = 52/136 (38.24%), Postives = 77/136 (56.62%), Query Frame = 1
Query:  205 LLVPWRVLFAFVPPYHIAHGWIAFICSLIFISGIAYIVTKLTDIISCVTGINAYVIAFTALASGTSWPDLVASKIAAERQITADSAIANITCSNSVNIYVGIGIPWLIDTAYNFIVYKEPLRVQNAEGLSFSLLVF 612
            L V W+VLFA VPP    HGW  F  S++ I  +  ++  L     C  G+   V A   +A GTS PD  ASK+AA +   AD++I N+T SN+VN+++G+G+ W +   Y + V   P  V+    L+FS+ +F
Sbjct:  729 LTVFWKVLFACVPPTEYCHGWACFGVSILVIGLLTALIGDLASHFGCTVGLKDSVNAVVFVALGTSIPDTFASKVAALQDQCADASIGNVTGSNAVNVFLGLGVAWSVAAVY-WAVQGRPFEVRTGT-LAFSVTLF 862          
BLAST of EY685629 vs. ExPASy Swiss-Prot
Match: NAC1_RAT (Sodium/calcium exchanger 1 OS=Rattus norvegicus GN=Slc8a1 PE=2 SV=3)

HSP 1 Score: 96.6709 bits (239), Expect = 1.708e-19
Identity = 48/113 (42.48%), Postives = 67/113 (59.29%), Query Frame = 1
Query:  205 LLVPWRVLFAFVPPYHIAHGWIAFICSLIFISGIAYIVTKLTDIISCVTGINAYVIAFTALASGTSWPDLVASKIAAERQITADSAIANITCSNSVNIYVGIGIPWLIDTAYN 543
            L V W+VLFAFVPP    +GW  FI S++ I  +   +  L     C  G+   V A   +A GTS PD  ASK+AA +   AD++I N+T SN+VN+++GIG+ W I   Y+
Sbjct:  779 LTVFWKVLFAFVPPTEYWNGWACFIVSILMIGLLTAFIGDLASHFGCTIGLKDSVTAVVFVALGTSVPDTFASKVAATQDQYADASIGNVTGSNAVNVFLGIGVAWSIAAIYH 891          
BLAST of EY685629 vs. ExPASy Swiss-Prot
Match: NAC1_MOUSE (Sodium/calcium exchanger 1 OS=Mus musculus GN=Slc8a1 PE=1 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 1.708e-19
Identity = 48/113 (42.48%), Postives = 67/113 (59.29%), Query Frame = 1
Query:  205 LLVPWRVLFAFVPPYHIAHGWIAFICSLIFISGIAYIVTKLTDIISCVTGINAYVIAFTALASGTSWPDLVASKIAAERQITADSAIANITCSNSVNIYVGIGIPWLIDTAYN 543
            L V W+VLFAFVPP    +GW  FI S++ I  +   +  L     C  G+   V A   +A GTS PD  ASK+AA +   AD++I N+T SN+VN+++GIG+ W I   Y+
Sbjct:  778 LTVFWKVLFAFVPPTEYWNGWACFIVSILMIGLLTAFIGDLASHFGCTIGLKDSVTAVVFVALGTSVPDTFASKVAATQDQYADASIGNVTGSNAVNVFLGIGVAWSIAAIYH 890          
BLAST of EY685629 vs. ExPASy Swiss-Prot
Match: NAC1_HUMAN (Sodium/calcium exchanger 1 OS=Homo sapiens GN=SLC8A1 PE=1 SV=3)

HSP 1 Score: 96.6709 bits (239), Expect = 1.708e-19
Identity = 48/113 (42.48%), Postives = 67/113 (59.29%), Query Frame = 1
Query:  205 LLVPWRVLFAFVPPYHIAHGWIAFICSLIFISGIAYIVTKLTDIISCVTGINAYVIAFTALASGTSWPDLVASKIAAERQITADSAIANITCSNSVNIYVGIGIPWLIDTAYN 543
            L V W+VLFAFVPP    +GW  FI S++ I  +   +  L     C  G+   V A   +A GTS PD  ASK+AA +   AD++I N+T SN+VN+++GIG+ W I   Y+
Sbjct:  781 LTVFWKVLFAFVPPTEYWNGWACFIVSILMIGLLTAFIGDLASHFGCTIGLKDSVTAVVFVALGTSVPDTFASKVAATQDQYADASIGNVTGSNAVNVFLGIGVAWSIAAIYH 893          
BLAST of EY685629 vs. ExPASy Swiss-Prot
Match: NAC1_FELCA (Sodium/calcium exchanger 1 OS=Felis catus GN=SLC8A1 PE=2 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 1.708e-19
Identity = 48/113 (42.48%), Postives = 67/113 (59.29%), Query Frame = 1
Query:  205 LLVPWRVLFAFVPPYHIAHGWIAFICSLIFISGIAYIVTKLTDIISCVTGINAYVIAFTALASGTSWPDLVASKIAAERQITADSAIANITCSNSVNIYVGIGIPWLIDTAYN 543
            L V W+VLFAFVPP    +GW  FI S++ I  +   +  L     C  G+   V A   +A GTS PD  ASK+AA +   AD++I N+T SN+VN+++GIG+ W I   Y+
Sbjct:  778 LTVFWKVLFAFVPPTEYWNGWACFIVSILMIGILTAFIGDLASHFGCTIGLKDSVTAVVFVALGTSVPDTFASKVAATQDQYADASIGNVTGSNAVNVFLGIGVAWSIAAIYH 890          
BLAST of EY685629 vs. ExPASy Swiss-Prot
Match: NAC1_CAVPO (Sodium/calcium exchanger 1 OS=Cavia porcellus GN=SLC8A1 PE=2 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 1.708e-19
Identity = 48/113 (42.48%), Postives = 67/113 (59.29%), Query Frame = 1
Query:  205 LLVPWRVLFAFVPPYHIAHGWIAFICSLIFISGIAYIVTKLTDIISCVTGINAYVIAFTALASGTSWPDLVASKIAAERQITADSAIANITCSNSVNIYVGIGIPWLIDTAYN 543
            L V W+VLFAFVPP    +GW  FI S++ I  +   +  L     C  G+   V A   +A GTS PD  ASK+AA +   AD++I N+T SN+VN+++GIG+ W I   Y+
Sbjct:  778 LTVFWKVLFAFVPPTEYWNGWACFIVSILMIGLLTAFIGDLASHFGCTIGLKDSVTAVVFVALGTSVPDTFASKVAATQDQYADASIGNVTGSNAVNVFLGIGVAWSIAAIYH 890          
BLAST of EY685629 vs. ExPASy Swiss-Prot
Match: NAC1_CANFA (Sodium/calcium exchanger 1 OS=Canis familiaris GN=SLC8A1 PE=1 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 1.708e-19
Identity = 48/113 (42.48%), Postives = 67/113 (59.29%), Query Frame = 1
Query:  205 LLVPWRVLFAFVPPYHIAHGWIAFICSLIFISGIAYIVTKLTDIISCVTGINAYVIAFTALASGTSWPDLVASKIAAERQITADSAIANITCSNSVNIYVGIGIPWLIDTAYN 543
            L V W+VLFAFVPP    +GW  FI S++ I  +   +  L     C  G+   V A   +A GTS PD  ASK+AA +   AD++I N+T SN+VN+++GIG+ W I   Y+
Sbjct:  778 LTVFWKVLFAFVPPTEYWNGWACFIVSILMIGILTAFIGDLASHFGCTIGLKDSVTAVVFVALGTSVPDTFASKVAATQDQYADASIGNVTGSNAVNVFLGIGVAWSIAAIYH 890          
BLAST of EY685629 vs. ExPASy Swiss-Prot
Match: NAC1_BOVIN (Sodium/calcium exchanger 1 OS=Bos taurus GN=SLC8A1 PE=1 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 6.491e-19
Identity = 47/113 (41.59%), Postives = 67/113 (59.29%), Query Frame = 1
Query:  205 LLVPWRVLFAFVPPYHIAHGWIAFICSLIFISGIAYIVTKLTDIISCVTGINAYVIAFTALASGTSWPDLVASKIAAERQITADSAIANITCSNSVNIYVGIGIPWLIDTAYN 543
            L V W+VLFAFVPP    +GW  FI S++ I  +   +  L    +C   +   V A   +A GTS PD  ASK+AA +   AD++I N+T SN+VN+++GIG+ W I   Y+
Sbjct:  778 LTVFWKVLFAFVPPTEYWNGWACFIVSILMIGLLTAFIGDLASHFACTIALKDSVTAVVFVALGTSVPDTFASKVAATQDQYADASIGNVTGSNAVNVFLGIGVAWSIAAIYH 890          
The following BLAST results are available for this feature:
BLAST of EY685629 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 12
Match NameE-valueIdentityDescription
NAC3_RAT2.635e-2037.24Sodium/calcium exchanger 3 OS=Rattus norvegicus GN... [more]
NAC3_HUMAN4.495e-2037.93Sodium/calcium exchanger 3 OS=Homo sapiens GN=SLC8... [more]
NAC2_HUMAN1.708e-1938.24Sodium/calcium exchanger 2 OS=Homo sapiens GN=SLC8... [more]
NAC1_RAT1.708e-1942.48Sodium/calcium exchanger 1 OS=Rattus norvegicus GN... [more]
NAC1_MOUSE1.708e-1942.48Sodium/calcium exchanger 1 OS=Mus musculus GN=Slc8... [more]
NAC1_HUMAN1.708e-1942.48Sodium/calcium exchanger 1 OS=Homo sapiens GN=SLC8... [more]
NAC1_FELCA1.708e-1942.48Sodium/calcium exchanger 1 OS=Felis catus GN=SLC8A... [more]
NAC1_CAVPO1.708e-1942.48Sodium/calcium exchanger 1 OS=Cavia porcellus GN=S... [more]
NAC1_CANFA1.708e-1942.48Sodium/calcium exchanger 1 OS=Canis familiaris GN=... [more]
NAC1_BOVIN6.491e-1941.59Sodium/calcium exchanger 1 OS=Bos taurus GN=SLC8A1... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C2-003-024-A10-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY685629 ID=EY685629; Name=EY685629; organism=Citrus sinensis; type=EST; length=824bp
TTTATTAATGTCTACATTGTGTAGTTGCACACTAGTAAGTTTTAGTGGTT
TTTCAGTATTAAATGGTTCCTCTTTTTCATTTTTTTCCAAGCATAGTAAT
AGATCCTCACAAATTATTTCTAATTTCTTAAACAGTTGGAAAGCCCAGAA
TCTAGGAAAATGAACAATATTTATCTACGGCTAGCCAGGATATTTTGGCA
ATCTCTCCTTGTGCCATGGAGAGTTCTATTTGCATTTGTGCCTCCTTATC
ATATTGCTCATGGCTGGATAGCCTTCATTTGCTCTCTAATTTTCATCAGT
GGGATAGCTTACATTGTTACGAAGCTCACAGATATTATAAGCTGTGTCAC
AGGTATAAATGCTTATGTCATAGCATTTACAGCATTAGCAAGTGGAACTT
CATGGCCAGATTTAGTGGCAAGTAAGATTGCTGCTGAACGGCAGATAACA
GCAGACTCTGCTATTGCGAATATCACTTGCAGCAATTCTGTGAATATTTA
TGTTGGCATTGGCATTCCGTGGTTGATTGACACTGCATACAATTTCATAG
TCTACAAGGAACCCTTGCGGGTCCAGAATGCCGAGGGACTCAGCTTTTCA
TTGCTTGTATTCTTCTGTACTTCTGGGGGTTGCATTGCTGGTCTGGTGGT
AAGGCGGCTAACGCTGGGCGGAGAACTTGGGGGGACCAAACCATCGGGGG
CTGGGGGTTCACACTGAAAAGTTCAAGCGGGCTTTGACGATTTATGGCGG
CGGTACGAAACGTCACAGCACAGGGAGAACAGCACCTAAAAGGCCACCCA
GTGCTCACTGGACCATGCCCCACC
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