EY685588 | Citrus Genome Database

Overview


Name	EY685588
Unique Name	EY685588
Type	EST
Organism	Citrus sinensis (Sweet orange)
Sequence length	380

Libraries


Library Name	Type
Sweet orange bark, greenhouse plant	cdna_library

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
BLAST: Citrus ESTs to Prunus persica proteins V1	2010-05-10
BLAST: Citrus ESTs to Populus V2 proteins	2010-05-10
BLAST: Citrus ESTs to TAIR9	2010-05-10
BLAST: Citrus ESTs to SwissProt	2010-05-10

Homology

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BLAST of EY685588 vs. ExPASy Swiss-Prot
Match: HSP71_ARATH (Heat shock cognate 70 kDa protein 1 OS=Arabidopsis thaliana GN=HSC70-1 PE=1 SV=3)

HSP 1 Score: 167.933 bits (424), Expect = 1.415e-41
Identity = 84/119 (70.59%), Postives = 100/119 (84.03%), Query Frame = 2

Query:    2 TTGQKNKITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYHMRNTVKDKKIGSKLDPPDKKKIEDAIDQAIQWLDSHPAG*SQ*I*KQKERSFENILHPLIAQKY 358
            TTGQKNKITITNDKGRLSKDEIEKMVQEAEKYK+EDEEHKKKVEAKNALENYAY+MRNT++D+KIG KL   DKKKIED+I+QAIQWL+ +    +    + K +  E+I +P+IA+ Y
Sbjct:  500 TTGQKNKITITNDKGRLSKDEIEKMVQEAEKYKSEDEEHKKKVEAKNALENYAYNMRNTIQDEKIGEKLPAADKKKIEDSIEQAIQWLEGNQLAEADEF-EDKMKELESICNPIIAKMY 617

[Close]

BLAST of EY685588 vs. ExPASy Swiss-Prot
Match: HSP72_ARATH (Heat shock cognate 70 kDa protein 2 OS=Arabidopsis thaliana GN=HSC70-2 PE=2 SV=2)

HSP 1 Score: 167.162 bits (422), Expect = 2.414e-41
Identity = 81/122 (66.39%), Postives = 102/122 (83.61%), Query Frame = 2

Query:    2 TTGQKNKITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYHMRNTVKDKKIGSKLDPPDKKKIEDAIDQAIQWLDSHPAG*SQ*I*KQKERSFENILHPLIAQKYTRG 367
            TTG+KNKITITNDKGRLSK++IEKMVQEAEKYK+EDEEHKKKVEAKNALENYAY+MRNT++D+KIG KL   DKKK+ED+I++AIQWLD +  G +    + K +  E++ +P+IA+ Y  G
Sbjct:  500 TTGKKNKITITNDKGRLSKEDIEKMVQEAEKYKSEDEEHKKKVEAKNALENYAYNMRNTIRDEKIGEKLPAADKKKVEDSIEEAIQWLDGNQLGEADEF-EDKMKELESVCNPIIAKMYQGG 620

[Close]

BLAST of EY685588 vs. ExPASy Swiss-Prot
Match: HSP72_SOLLC (Heat shock cognate 70 kDa protein 2 OS=Solanum lycopersicum GN=HSC-2 PE=2 SV=1)

HSP 1 Score: 166.777 bits (421), Expect = 3.153e-41
Identity = 83/119 (69.75%), Postives = 100/119 (84.03%), Query Frame = 2

Query:    2 TTGQKNKITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYHMRNTVKDKKIGSKLDPPDKKKIEDAIDQAIQWLDSHPAG*SQ*I*KQKERSFENILHPLIAQKY 358
            TTGQKNKITITNDKGRLSK+EIEKMVQEAEKYK+EDEEHKKKVEAKNALENYAY+MRNT+KD+KI SKL   D+ KIEDAI+QAIQWLD +    ++   + K +  E++ +P+IA+ Y
Sbjct:  500 TTGQKNKITITNDKGRLSKEEIEKMVQEAEKYKSEDEEHKKKVEAKNALENYAYNMRNTIKDEKIASKLSADDRTKIEDAIEQAIQWLDGNQLAEAEEF-EDKMKELESLCNPIIAKMY 617

[Close]

BLAST of EY685588 vs. ExPASy Swiss-Prot
Match: HSP71_SOLLC (Heat shock cognate 70 kDa protein 1 OS=Solanum lycopersicum GN=HSC-I PE=2 SV=1)

HSP 1 Score: 166.392 bits (420), Expect = 4.118e-41
Identity = 86/119 (72.27%), Postives = 98/119 (82.35%), Query Frame = 2

Query:    2 TTGQKNKITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYHMRNTVKDKKIGSKLDPPDKKKIEDAIDQAIQWLDSHPAG*SQ*I*KQKERSFENILHPLIAQKY 358
            TTGQKNKITITNDKGRLSK+EIEKMVQEAEKYKAEDEE KKKVEAKN+LENYAY+MRNTVKD+KIGSKL   DKKKIEDA+DQAI WL+S+         + K +  E I +P+IA+ Y
Sbjct:  502 TTGQKNKITITNDKGRLSKEEIEKMVQEAEKYKAEDEELKKKVEAKNSLENYAYNMRNTVKDEKIGSKLSSDDKKKIEDAVDQAISWLESNQLAEVDEF-EDKMKELEGICNPIIAKMY 619

[Close]

BLAST of EY685588 vs. ExPASy Swiss-Prot
Match: HSP73_ARATH (Heat shock cognate 70 kDa protein 3 OS=Arabidopsis thaliana GN=HSC70-3 PE=1 SV=1)

HSP 1 Score: 163.696 bits (413), Expect = 2.669e-40
Identity = 82/122 (67.21%), Postives = 100/122 (81.97%), Query Frame = 2

Query:    2 TTGQKNKITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYHMRNTVKDKKIGSKLDPPDKKKIEDAIDQAIQWLDSHPAG*SQ*I*KQKERSFENILHPLIAQKYTRG 367
            TTGQKNKITITNDKGRLSKDEIEKMVQEAEKYK+EDEEHKKKV+AKNALENYAY+MRNT++D+KIG KL   DKKKIED+I+ AI+WL+++         + K +  E+I +P+IA+ Y  G
Sbjct:  500 TTGQKNKITITNDKGRLSKDEIEKMVQEAEKYKSEDEEHKKKVDAKNALENYAYNMRNTIRDEKIGEKLAGDDKKKIEDSIEAAIEWLEANQLAECDEF-EDKMKELESICNPIIAKMYQGG 620

[Close]

BLAST of EY685588 vs. ExPASy Swiss-Prot
Match: HSP70_MAIZE (Heat shock 70 kDa protein OS=Zea mays GN=HSP70 PE=3 SV=2)

HSP 1 Score: 162.155 bits (409), Expect = 7.767e-40
Identity = 84/119 (70.59%), Postives = 96/119 (80.67%), Query Frame = 2

Query:    2 TTGQKNKITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYHMRNTVKDKKIGSKLDPPDKKKIEDAIDQAIQWLDSHPAG*SQ*I*KQKERSFENILHPLIAQKY 358
            TTGQKNKITITNDKGRLSK+EIEKMVQEAEKYKAEDEE KKKV+AKNALENYAY+MRNT+KD KI SKL   DKKKIEDA+D AI WLDS+     +   + K +  E I +P+IA+ Y
Sbjct:  496 TTGQKNKITITNDKGRLSKEEIEKMVQEAEKYKAEDEEVKKKVDAKNALENYAYNMRNTIKDDKIASKLPAEDKKKIEDAVDGAISWLDSNQLAEVEEF-EDKMKELEGICNPIIAKMY 613

[Close]

BLAST of EY685588 vs. ExPASy Swiss-Prot
Match: HSP7E_SPIOL (Chloroplast envelope membrane 70 kDa heat shock-related protein OS=Spinacia oleracea GN=SCE70 PE=1 SV=3)

HSP 1 Score: 161.77 bits (408), Expect = 1.014e-39
Identity = 82/119 (68.91%), Postives = 97/119 (81.51%), Query Frame = 2

Query:    2 TTGQKNKITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYHMRNTVKDKKIGSKLDPPDKKKIEDAIDQAIQWLDSHPAG*SQ*I*KQKERSFENILHPLIAQKY 358
            TTGQKNKI ITNDKGRLSK+EIEKMVQEAEKYK+EDEEHKKKVE+KNALENYAY+MRN VKD+KIG+KL   DKKKIE+AID +IQWLD +    +      K +  E+I +P+IA+ Y
Sbjct:  500 TTGQKNKIRITNDKGRLSKEEIEKMVQEAEKYKSEDEEHKKKVESKNALENYAYNMRNIVKDEKIGAKLSEADKKKIEEAIDASIQWLDGNQLAEADEF-DDKMKELESICNPIIAKMY 617

[Close]

BLAST of EY685588 vs. ExPASy Swiss-Prot
Match: HSP7C_PETHY (Heat shock cognate 70 kDa protein OS=Petunia hybrida GN=HSP70 PE=2 SV=1)

HSP 1 Score: 161.77 bits (408), Expect = 1.014e-39
Identity = 82/122 (67.21%), Postives = 100/122 (81.97%), Query Frame = 2

Query:    2 TTGQKNKITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYHMRNTVKDKKIGSKLDPPDKKKIEDAIDQAIQWLDSHPAG*SQ*I*KQKERSFENILHPLIAQKYTRG 367
            TTGQKNKITITNDKGRLSK+EIE+MVQEAEKYK+EDEE KKKVEAKNALENYAY+MRNT+KD KI S+L   DKK+IEDAID+AI+WLD++    +    + K +  E+I +P+IA+ Y  G
Sbjct:  500 TTGQKNKITITNDKGRLSKEEIERMVQEAEKYKSEDEELKKKVEAKNALENYAYNMRNTIKDDKINSQLSAADKKRIEDAIDEAIKWLDNNQLAEADEF-EDKMKELESICNPIIAKMYQGG 620

[Close]

BLAST of EY685588 vs. ExPASy Swiss-Prot
Match: HSP70_SOYBN (Heat shock 70 kDa protein OS=Glycine max GN=HSP70 PE=3 SV=1)

HSP 1 Score: 151.754 bits (382), Expect = 1.050e-36
Identity = 75/119 (63.03%), Postives = 95/119 (79.83%), Query Frame = 2

Query:    2 TTGQKNKITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYHMRNTVKDKKIGSKLDPPDKKKIEDAIDQAIQWLDSHPAG*SQ*I*KQKERSFENILHPLIAQKY 358
            T G KNKITITNDKGRLSK+EIEKMV++AE+YKAEDEE KKKVEAKN+LENYAY+MRNT+KD+KIG KL P +K+KIE A++ AIQWL+ +         + K++  E I +P+IA+ Y
Sbjct:  499 TAGVKNKITITNDKGRLSKEEIEKMVKDAERYKAEDEEVKKKVEAKNSLENYAYNMRNTIKDEKIGGKLSPDEKQKIEKAVEDAIQWLEGNQMAEVDEF-EDKQKELEGICNPIIAKMY 616

[Close]

BLAST of EY685588 vs. ExPASy Swiss-Prot
Match: HSP70_DAUCA (Heat shock 70 kDa protein OS=Daucus carota GN=HSP70 PE=3 SV=1)

HSP 1 Score: 147.132 bits (370), Expect = 2.585e-35
Identity = 75/119 (63.03%), Postives = 93/119 (78.15%), Query Frame = 2

Query:    2 TTGQKNKITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYHMRNTVKDKKIGSKLDPPDKKKIEDAIDQAIQWLDSHPAG*SQ*I*KQKERSFENILHPLIAQKY 358
            T G KNKITITND GRLSKDEIEK+V+EAEKYKAEDEE KKKVEAKNALENYAY+MRNT+KD KI  KLD  DK+KIE A+++AI+WL+ +       + + K +  E + +P+IA+ Y
Sbjct:  502 TAGVKNKITITNDNGRLSKDEIEKLVKEAEKYKAEDEEVKKKVEAKNALENYAYNMRNTIKDDKIPGKLDAGDKEKIETAVNEAIEWLEKNQLAEVDEL-EDKLKELEGLCNPIIARLY 619

The following BLAST results are available for this feature:

BLAST of EY685588 vs. ExPASy Swiss-Prot

BLAST of EY685588 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 185


Match Name	E-value	Identity	Description
HSP71_ARATH	1.415e-41	70.59	Heat shock cognate 70 kDa protein 1 OS=Arabidopsis...	[more]
HSP72_ARATH	2.414e-41	66.39	Heat shock cognate 70 kDa protein 2 OS=Arabidopsis...	[more]
HSP72_SOLLC	3.153e-41	69.75	Heat shock cognate 70 kDa protein 2 OS=Solanum lyc...	[more]
HSP71_SOLLC	4.118e-41	72.27	Heat shock cognate 70 kDa protein 1 OS=Solanum lyc...	[more]
HSP73_ARATH	2.669e-40	67.21	Heat shock cognate 70 kDa protein 3 OS=Arabidopsis...	[more]
HSP70_MAIZE	7.767e-40	70.59	Heat shock 70 kDa protein OS=Zea mays GN=HSP70 PE=...	[more]
HSP7E_SPIOL	1.014e-39	68.91	Chloroplast envelope membrane 70 kDa heat shock-re...	[more]
HSP7C_PETHY	1.014e-39	67.21	Heat shock cognate 70 kDa protein OS=Petunia hybri...	[more]
HSP70_SOYBN	1.050e-36	63.03	Heat shock 70 kDa protein OS=Glycine max GN=HSP70 ...	[more]
HSP70_DAUCA	2.585e-35	63.03	Heat shock 70 kDa protein OS=Daucus carota GN=HSP7...	[more]

Pages

Properties


Property Name	Value
Genbank description	CS00-C2-003-021-D04-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>EY685588 ID=EY685588; Name=EY685588; organism=Citrus sinensis; type=EST; length=380bp
GACAACGGGCCAAAAGAACAAGATCACAATCACCAACGATAAGGGTAGAT
TGTCAAAGGATGAAATTGAGAAGATGGTTCAAGAGGCCGAGAAGTACAAG
GCTGAAGACGAGGAGCACAAGAAGAAGGTCGAGGCCAAGAATGCCTTGGA
AAACTATGCCTACCATATGAGGAACACTGTCAAGGACAAGAAGATCGGCT
CCAAACTTGATCCACCTGACAAAAAGAAGATTGAGGATGCCATTGATCAG
GCAATTCAATGGCTTGATAGCCACCCAGCTGGCTGAAGCCAATGAATTTG
AAAACAAAAAGAAAGGAGCTTTGAAAACATCTTGCATCCCCTCATTGCCC
AAAAGTATACAAGGGGCTTGGTGGTGGAAA