EY710526

Overview
NameEY710526
Unique NameEY710526
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length967
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY710526 vs. ExPASy Swiss-Prot
Match: RL3_ORYSJ (60S ribosomal protein L3 OS=Oryza sativa subsp. japonica GN=RPL3 PE=2 SV=2)

HSP 1 Score: 317.775 bits (813), Expect = 6.027e-86
Identity = 151/166 (90.96%), Postives = 156/166 (93.98%), Query Frame = 1
Query:   10 QIPVHAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTGITEFDRTEKDITPMGGFPHYGIVKDDYLMIKGCCVGPKKRVVTLPQSLLKQTSRFTLEEIKIKFIDTSFKFG 507
            +IPV AVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVS+TVARAGQNGYHHRTEMNKKVYK+GK GQESH   TEFDRTEKDITPMGGFPHYG+VK DYLMIKGCCVGPKKRVVTL QSLLKQTSR  LEEIK+KFIDTS KFG
Sbjct:  205 EIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKVYKIGKSGQESHAACTEFDRTEKDITPMGGFPHYGVVKGDYLMIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFIDTSSKFG 370          
BLAST of EY710526 vs. ExPASy Swiss-Prot
Match: RL31_ARATH (60S ribosomal protein L3-1 OS=Arabidopsis thaliana GN=ARP1 PE=2 SV=5)

HSP 1 Score: 310.071 bits (793), Expect = 1.257e-83
Identity = 145/166 (87.35%), Postives = 156/166 (93.98%), Query Frame = 1
Query:   10 QIPVHAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTGITEFDRTEKDITPMGGFPHYGIVKDDYLMIKGCCVGPKKRVVTLPQSLLKQTSRFTLEEIKIKFIDTSFKFG 507
            QIP+ AVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVS+TVARAGQNGYHHRTE+NKK+Y+LGK G E+HT +TE+DRTEKD+TPMGGFPHYGIVKDDYLMIKGCCVGPKKRVVTL QSLL QTSR  LEEIK+KFIDT+  FG
Sbjct:  205 QIPIEAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTELNKKIYRLGKVGTEAHTAMTEYDRTEKDVTPMGGFPHYGIVKDDYLMIKGCCVGPKKRVVTLRQSLLTQTSRLALEEIKLKFIDTASIFG 370          
BLAST of EY710526 vs. ExPASy Swiss-Prot
Match: RL32_ARATH (60S ribosomal protein L3-2 OS=Arabidopsis thaliana GN=ARP2 PE=2 SV=4)

HSP 1 Score: 307.375 bits (786), Expect = 8.146e-83
Identity = 147/187 (78.61%), Postives = 164/187 (87.70%), Query Frame = 1
Query:   10 QIPVHAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTGITEFDRTEKDITPMGGFPHYGIVKDDYLMIKGCCVGPKKRVVTLPQSLLKQTSRFTLEEIKIKFIDTSFKFGAWAASRLPREKPKVLWDALKA 570
            Q+PV A+FQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVS+TVARAGQNGYHHRTEMNKKVY++GK GQE+H+ +TE+DRTEKDITPMGGFPHYGIVK+DYLMIKGCCVGPKKRVVTL Q+LLKQTSR  +EEIK+KFID +   G     +  +EK K     +KA
Sbjct:  205 QVPVDAIFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKVYRVGKVGQETHSAMTEYDRTEKDITPMGGFPHYGIVKEDYLMIKGCCVGPKKRVVTLRQTLLKQTSRLAMEEIKLKFIDAASN-GGHGRFQTSQEKAKFYGRTIKA 390          
BLAST of EY710526 vs. ExPASy Swiss-Prot
Match: RL3_TOXCA (60S ribosomal protein L3 OS=Toxocara canis GN=RPL3 PE=2 SV=2)

HSP 1 Score: 239.965 bits (611), Expect = 1.597e-62
Identity = 110/169 (65.09%), Postives = 136/169 (80.47%), Query Frame = 1
Query:   10 QIPVHAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKG---GQESHTGITEFDRTEKDITPMGGFPHYGIVKDDYLMIKGCCVGPKKRVVTLPQSLLKQTSRFTLEEIKIKFIDTSFKFG 507
            Q+PV +VF +DEMID IGVTKGKG++GV +RW   +LPRKTH+GLRKVACIGAWHP+RV FTVARAGQ GYHHRTE+NKK+Y+LGK     +    G T++D TEK + PMGGFPHYG+V  D++MI+GCCVG KKR +TL +SL+ QT RF  E+I +K+IDTS KFG
Sbjct:  204 QVPVDSVFAQDEMIDCIGVTKGKGFKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVQFTVARAGQKGYHHRTEVNKKIYRLGKSCLTEEGKKNGGTDYDITEKSVNPMGGFPHYGLVNQDFVMIRGCCVGSKKRPITLRKSLIVQTKRFAHEKINLKWIDTSSKFG 372          
BLAST of EY710526 vs. ExPASy Swiss-Prot
Match: RL3_DROME (60S ribosomal protein L3 OS=Drosophila melanogaster GN=RpL3 PE=1 SV=3)

HSP 1 Score: 234.958 bits (598), Expect = 5.138e-61
Identity = 110/171 (64.33%), Postives = 134/171 (78.36%), Query Frame = 1
Query:   13 IPVHAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQE------SHTGITEFDRTEKDITPMGGFPHYGIVKDDYLMIKGCCVGPKKRVVTLPQSLLKQTSRFTLEEIKIKFIDTSFKFG 507
            I V  VF +DEMID +GVTKGKG++GV +RW   +LPRKTH+GLRKVACIGAWHP+RVS TVARAGQ GYHHRTE+NKK+Y++G G          +   TE+D T+K ITPMGGFPHYG V +D++MIKGCC+G KKR++TL +SLLK T R  LE+IK+KFIDTS K G
Sbjct:  205 IQVSNVFGQDEMIDCVGVTKGKGFKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVSTTVARAGQKGYHHRTEINKKIYRIGAGIHTKDGKVIKNNASTEYDLTDKSITPMGGFPHYGEVNNDFVMIKGCCIGSKKRIITLRKSLLKHTKRSALEQIKLKFIDTSSKMG 375          
BLAST of EY710526 vs. ExPASy Swiss-Prot
Match: RL3_MOUSE (60S ribosomal protein L3 OS=Mus musculus GN=Rpl3 PE=2 SV=2)

HSP 1 Score: 233.032 bits (593), Expect = 1.952e-60
Identity = 110/172 (63.95%), Postives = 137/172 (79.65%), Query Frame = 1
Query:   10 QIPVHAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGK------GGQESHTGITEFDRTEKDITPMGGFPHYGIVKDDYLMIKGCCVGPKKRVVTLPQSLLKQTSRFTLEEIKIKFIDTSFKFG 507
            Q+PV+ VF +DEMID+IGVTKGKGY+GV +RW   +LPRKTHRGLRKVACIGAWHPARV+FTVARAGQ GYHHRTE+NKK+YK+G+      G    +   T++D ++K I P+GGF HYG V +D++M+KGC VG KKRV+TL +SLL QT R  LE+I +KFIDT+ KFG
Sbjct:  204 QVPVNQVFGQDEMIDVIGVTKGKGYKGVTSRWHTKKLPRKTHRGLRKVACIGAWHPARVAFTVARAGQKGYHHRTEINKKIYKIGQGYLIKDGKLIKNNASTDYDLSDKSINPLGGFVHYGEVTNDFIMLKGCVVGTKKRVLTLRKSLLVQTKRRALEKIDLKFIDTTSKFG 375          
BLAST of EY710526 vs. ExPASy Swiss-Prot
Match: RL3_RAT (60S ribosomal protein L3 OS=Rattus norvegicus GN=Rpl3 PE=1 SV=3)

HSP 1 Score: 231.491 bits (589), Expect = 5.681e-60
Identity = 109/172 (63.37%), Postives = 137/172 (79.65%), Query Frame = 1
Query:   10 QIPVHAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGK------GGQESHTGITEFDRTEKDITPMGGFPHYGIVKDDYLMIKGCCVGPKKRVVTLPQSLLKQTSRFTLEEIKIKFIDTSFKFG 507
            Q+PV+ VF +DEMID+IGVTKGKGY+GV +RW   +LPRKTHRGLRKVACIGAWHPARV+F+VARAGQ GYHHRTE+NKK+YK+G+      G    +   T++D ++K I P+GGF HYG V +D++M+KGC VG KKRV+TL +SLL QT R  LE+I +KFIDT+ KFG
Sbjct:  204 QVPVNQVFGQDEMIDVIGVTKGKGYKGVTSRWHTKKLPRKTHRGLRKVACIGAWHPARVAFSVARAGQKGYHHRTEINKKIYKIGQGYLIKDGKLIKNNASTDYDLSDKSINPLGGFVHYGEVTNDFIMLKGCVVGTKKRVLTLRKSLLVQTKRRALEKIDLKFIDTTSKFG 375          
BLAST of EY710526 vs. ExPASy Swiss-Prot
Match: RL3_HUMAN (60S ribosomal protein L3 OS=Homo sapiens GN=RPL3 PE=1 SV=2)

HSP 1 Score: 231.106 bits (588), Expect = 7.419e-60
Identity = 109/172 (63.37%), Postives = 137/172 (79.65%), Query Frame = 1
Query:   10 QIPVHAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGK------GGQESHTGITEFDRTEKDITPMGGFPHYGIVKDDYLMIKGCCVGPKKRVVTLPQSLLKQTSRFTLEEIKIKFIDTSFKFG 507
            Q+PV+ VF +DEMID+IGVTKGKGY+GV +RW   +LPRKTHRGLRKVACIGAWHPARV+F+VARAGQ GYHHRTE+NKK+YK+G+      G    +   T++D ++K I P+GGF HYG V +D++M+KGC VG KKRV+TL +SLL QT R  LE+I +KFIDT+ KFG
Sbjct:  204 QVPVNQVFGQDEMIDVIGVTKGKGYKGVTSRWHTKKLPRKTHRGLRKVACIGAWHPARVAFSVARAGQKGYHHRTEINKKIYKIGQGYLIKDGKLIKNNASTDYDLSDKSINPLGGFVHYGEVTNDFVMLKGCVVGTKKRVLTLRKSLLVQTKRRALEKIDLKFIDTTSKFG 375          
BLAST of EY710526 vs. ExPASy Swiss-Prot
Match: RL3_BOVIN (60S ribosomal protein L3 OS=Bos taurus GN=RPL3 PE=2 SV=2)

HSP 1 Score: 230.335 bits (586), Expect = 1.265e-59
Identity = 109/172 (63.37%), Postives = 136/172 (79.07%), Query Frame = 1
Query:   10 QIPVHAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGK------GGQESHTGITEFDRTEKDITPMGGFPHYGIVKDDYLMIKGCCVGPKKRVVTLPQSLLKQTSRFTLEEIKIKFIDTSFKFG 507
            Q+PV  VF +DEMID+IGVTKGKGY+GV +RW   +LPRKTHRGLRKVACIGAWHPARV+F+VARAGQ GYHHRTE+NKK+YK+G+      G    +   T++D ++K I P+GGF HYG V +D++M+KGC VG KKRV+TL +SLL QT R  LE+I +KFIDT+ KFG
Sbjct:  204 QVPVSQVFGQDEMIDVIGVTKGKGYKGVTSRWHTKKLPRKTHRGLRKVACIGAWHPARVAFSVARAGQKGYHHRTEINKKIYKIGQGYLIKDGKLIKNNASTDYDLSDKSINPLGGFVHYGEVTNDFVMLKGCVVGTKKRVLTLRKSLLVQTKRRALEKIDLKFIDTTSKFG 375          
BLAST of EY710526 vs. ExPASy Swiss-Prot
Match: RL3_ASHGO (60S ribosomal protein L3 OS=Ashbya gossypii GN=RPL3 PE=3 SV=1)

HSP 1 Score: 230.335 bits (586), Expect = 1.265e-59
Identity = 108/165 (65.45%), Postives = 132/165 (80.00%), Query Frame = 1
Query:   13 IPVHAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTGITEFDRTEKDITPMGGFPHYGIVKDDYLMIKGCCVGPKKRVVTLPQSLLKQTSRFTLEEIKIKFIDTSFKFG 507
            + V +VF+++EMID+I VTKG G+EGV  RWG  +LPRKTHRGLRKVACIGAWHPA V +TVARAGQNGYHHRT +N KVY++GKGG E +   TEFDRT+K ITPMGGF HYG V +D++M+KG   G +KRVVTL +SL   TSR  LEE+ +K+IDT+ KFG
Sbjct:  204 VSVDSVFEQNEMIDVIAVTKGHGFEGVTHRWGTKKLPRKTHRGLRKVACIGAWHPAHVMWTVARAGQNGYHHRTSINHKVYRIGKGGDEGNAA-TEFDRTKKTITPMGGFVHYGAVNNDFVMVKGSIPGTRKRVVTLRKSLYTSTSRRALEEVNLKWIDTASKFG 367          
The following BLAST results are available for this feature:
BLAST of EY710526 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 84
Match NameE-valueIdentityDescription
RL3_ORYSJ6.027e-8690.9660S ribosomal protein L3 OS=Oryza sativa subsp. ja... [more]
RL31_ARATH1.257e-8387.3560S ribosomal protein L3-1 OS=Arabidopsis thaliana... [more]
RL32_ARATH8.146e-8378.6160S ribosomal protein L3-2 OS=Arabidopsis thaliana... [more]
RL3_TOXCA1.597e-6265.0960S ribosomal protein L3 OS=Toxocara canis GN=RPL3... [more]
RL3_DROME5.138e-6164.3360S ribosomal protein L3 OS=Drosophila melanogaste... [more]
RL3_MOUSE1.952e-6063.9560S ribosomal protein L3 OS=Mus musculus GN=Rpl3 P... [more]
RL3_RAT5.681e-6063.3760S ribosomal protein L3 OS=Rattus norvegicus GN=R... [more]
RL3_HUMAN7.419e-6063.3760S ribosomal protein L3 OS=Homo sapiens GN=RPL3 P... [more]
RL3_BOVIN1.265e-5963.3760S ribosomal protein L3 OS=Bos taurus GN=RPL3 PE=... [more]
RL3_ASHGO1.265e-5965.4560S ribosomal protein L3 OS=Ashbya gossypii GN=RPL... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-701-024-C01-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY710526 ID=EY710526; Name=EY710526; organism=Citrus sinensis; type=EST; length=967bp
CTTTGANAGCAAATTCCTGTCCATGCTGTTTTCCAGAAGGATGAGATGAT
TGACATCATCGGTGTCACGAAAGGTAAAGGTTATGAAGGTGTTGTCACCC
GTTGGGGTGTTACCCGCCTTCCTCGCAAGACTCACAGAGGTCTGCGTAAG
GTGGCTTGTATTGGTGCCTGGCATCCTGCTAGGGTTTCCTTCACAGTTGC
CAGAGCTGGTCAGAATGGATACCATCATCGTACTGAAATGAACAAGAAGG
TTTACAAGCTTGGCAAGGGTGGACAGGAGTCTCACACTGGCATAACTGAA
TTTGACAGGACTGAGAAGGACATTACCCCAATGGGTGGCTTTCCTCACTA
TGGTATTGTGAAAGATGATTATTTGATGATCAAGGGATGCTGTGTTGGAC
CTAAAAAGAGGGTGGTCACGCTTCCTCAGTCGCTTCTCAAACAGACATCT
CGTTTTACTCTTGAGGAAATCAAAATCAAGTTCATTGATACCTCTTTCAA
GTTTGGGGCATGGGCCGCTTCCCGACTACCCCGGGAGAAACCGAAAGTAC
TATGGGACGCCTTGAAAGCCATAATTATGCTTAAAAAGAACAAGAAGTTT
TTGCCCCCCTTTTTGGTTAATTCCAGGCGGTCAAAAAATTTTTAACCCAG
TTTTGACTATACTTGGAAACAAATTTTTAGAACCAGGGAATCAACCTTTG
GATTTATTTTTTTTCCTTTTTTTTATATTTTTTTTTTTTTTAACAAGAAA
AGGGCCGGGGGGTTTTTTTTTCATATTAAAAAAAATTTTTTAAAGATTTA
AATAAAAAGTATTCCCCCCAAAAAAAAAAAAAAAAAAAAAAAAAAAGGGG
GCAGGCCCGGGCTACTCAAAGAATGAAACCACCAACTACTAAATAACAAT
TTCCCACGACGCCATGAGGAAAGATGCCGCGCATAATCCAAACTTTTCAC
GAATATAAAATGGTGTA
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