EY685487

Overview
NameEY685487
Unique NameEY685487
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length999
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY685487 vs. ExPASy Swiss-Prot
Match: CP20A_ARATH (Peptidyl-prolyl cis-trans isomerase CYP20-1 OS=Arabidopsis thaliana GN=CYP20-1 PE=1 SV=1)

HSP 1 Score: 168.318 bits (425), Expect = 6.223e-41
Identity = 85/125 (68.00%), Postives = 99/125 (79.20%), Query Frame = 1
Query:   58 MLWAVVLLATFSSIQAKKSDQNLKEITNKVYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRTIPSFMLHRGDFPPQDGRVEESIQEKGGRNDHRPQKTTG 432
            +LW+++LL T S+IQAKKS +NLKEIT+KVYFDVEI GK AGRIVMGLFGK VPKT ENFRALCTGEKGIGK+GK LHYKGS+FHR IPSFML  GDF   +G   ESI  +   +++   K TG
Sbjct:    8 LLWSLLLLGTLSAIQAKKSKENLKEITHKVYFDVEIDGKAAGRIVMGLFGKTVPKTVENFRALCTGEKGIGKNGKALHYKGSSFHRIIPSFMLQGGDFTHGNGMGGESIYGEKFADENFKLKHTG 132          
BLAST of EY685487 vs. ExPASy Swiss-Prot
Match: CP19D_ARATH (Peptidyl-prolyl cis-trans isomerase CYP19-4 OS=Arabidopsis thaliana GN=CYP19-4 PE=1 SV=2)

HSP 1 Score: 151.369 bits (381), Expect = 7.872e-36
Identity = 78/125 (62.40%), Postives = 94/125 (75.20%), Query Frame = 1
Query:   58 MLWAVVLLATFSSIQAKKSDQNLKEITNKVYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRTIPSFMLHRGDFPPQDGRVEESIQEKGGRNDHRPQKTTG 432
            +L  + L    +SIQAK   ++LKE+T+KVYFDVEI GK AGR+V+GLFGKAVPKTAENFRALCTGEKG+GKSGKPLHYKGS FHR IPSFM+  GDF   +G   ESI  +   +++   K TG
Sbjct:    8 LLGTLFLFGAIASIQAK---EDLKEVTHKVYFDVEIDGKSAGRVVIGLFGKAVPKTAENFRALCTGEKGVGKSGKPLHYKGSKFHRIIPSFMIQGGDFTHGNGMGGESIYGQKFADENFKLKHTG 129          
BLAST of EY685487 vs. ExPASy Swiss-Prot
Match: PPIB_DICDI (Peptidyl-prolyl cis-trans isomerase B OS=Dictyostelium discoideum GN=cypB PE=1 SV=1)

HSP 1 Score: 130.568 bits (327), Expect = 1.438e-29
Identity = 67/109 (61.47%), Postives = 77/109 (70.64%), Query Frame = 1
Query:   70 VVLLATFSSIQAKKSDQNLK-EITNKVYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRTIPSFMLHRGDFPPQDGRVEESIQEK 393
            VVL     ++ A  S+     +ITNKV+FD+EI  KPAGRIV GL+GK VPKT ENFRALCTGEKG+G SGKPLHYK S FHR IP+FM+  GDF   DG   ESI  K
Sbjct:    6 VVLAIVLVTLWAMPSEAGKDPKITNKVFFDIEIDNKPAGRIVFGLYGKTVPKTVENFRALCTGEKGLGTSGKPLHYKDSKFHRIIPNFMIQGGDFTRGDGTGGESIYGK 114          
BLAST of EY685487 vs. ExPASy Swiss-Prot
Match: CYP7_CAEEL (Peptidyl-prolyl cis-trans isomerase 7 OS=Caenorhabditis elegans GN=cyn-7 PE=1 SV=2)

HSP 1 Score: 122.479 bits (306), Expect = 3.916e-27
Identity = 59/97 (60.82%), Postives = 72/97 (74.23%), Query Frame = 1
Query:  142 KVYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRTIPSFMLHRGDFPPQDGRVEESIQEKGGRNDHRPQKTTG 432
            +V+FD+ IAGKP GRIVM L+   VPKTAENFRALCTGEKG+GKSGKPLH+KGS FHR IP FM+  GDF   +G   ESI  +   +++  +K TG
Sbjct:    5 RVFFDITIAGKPTGRIVMELYNDIVPKTAENFRALCTGEKGVGKSGKPLHFKGSKFHRIIPEFMIQGGDFTRGNGTGGESIYGEKFPDENFKEKHTG 101          
BLAST of EY685487 vs. ExPASy Swiss-Prot
Match: CYPH_SOLLC (Peptidyl-prolyl cis-trans isomerase OS=Solanum lycopersicum GN=CYP PE=2 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 1.139e-26
Identity = 59/97 (60.82%), Postives = 68/97 (70.10%), Query Frame = 1
Query:  142 KVYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRTIPSFMLHRGDFPPQDGRVEESIQEKGGRNDHRPQKTTG 432
            KV+FD+ I G PAGR+VM LF    PKTAENFRALCTGEKG+GK GKPLHYKGSTFHR IP FM   GDF   +G   ESI      +++  +K TG
Sbjct:    5 KVFFDLTIGGAPAGRVVMELFADTTPKTAENFRALCTGEKGVGKMGKPLHYKGSTFHRVIPGFMCQGGDFTAGNGTGGESIYGAKFNDENFVKKHTG 101          
BLAST of EY685487 vs. ExPASy Swiss-Prot
Match: CYPH_LUPLU (Peptidyl-prolyl cis-trans isomerase OS=Lupinus luteus PE=2 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 1.488e-26
Identity = 56/81 (69.14%), Postives = 64/81 (79.01%), Query Frame = 1
Query:  142 KVYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRTIPSFMLHRGDFPPQDGRVEESI 384
            KV+FD+ IAG PAGRIVM L+    P+TAENFRALCTGEKG+G+SGKPLHYKGSTFHR IP+FM   GDF   +G   ESI
Sbjct:    5 KVFFDMAIAGNPAGRIVMELYADTTPRTAENFRALCTGEKGVGRSGKPLHYKGSTFHRVIPNFMCQGGDFTAGNGTGAESI 85          
BLAST of EY685487 vs. ExPASy Swiss-Prot
Match: CYPH_MAIZE (Peptidyl-prolyl cis-trans isomerase OS=Zea mays GN=CYP PE=2 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 2.538e-26
Identity = 56/81 (69.14%), Postives = 63/81 (77.78%), Query Frame = 1
Query:  142 KVYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRTIPSFMLHRGDFPPQDGRVEESI 384
            +V+FD+ + G PAGRIVM L+   VPKTAENFRALCTGEKG+GKSGKPLHYKGSTFHR IP FM   GDF   +G   ESI
Sbjct:    5 RVFFDMTVGGAPAGRIVMELYANEVPKTAENFRALCTGEKGVGKSGKPLHYKGSTFHRVIPEFMCQGGDFTRGNGTGGESI 85          
BLAST of EY685487 vs. ExPASy Swiss-Prot
Match: PPID_NEUCR (41 kDa peptidyl-prolyl cis-trans isomerase OS=Neurospora crassa GN=cyp-41 PE=2 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 7.385e-26
Identity = 56/91 (61.54%), Postives = 67/91 (73.63%), Query Frame = 1
Query:  112 SDQNLKEITNKVYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRTIPSFMLHRGDFPPQDGRVEESI 384
            S  ++K+  ++V+FD+ I GK AGRIV  L+   VPKTAENFRALCTGEKG+GK GKPLHYKGSTFHR I  FM+  GDF   +G   ESI
Sbjct:    3 STDDVKQARSRVFFDITIGGKAAGRIVFELYNDIVPKTAENFRALCTGEKGVGKLGKPLHYKGSTFHRVIKQFMIQGGDFTAGNGTGGESI 93          
BLAST of EY685487 vs. ExPASy Swiss-Prot
Match: CYPH_BRANA (Peptidyl-prolyl cis-trans isomerase OS=Brassica napus GN=CYP PE=2 SV=2)

HSP 1 Score: 118.242 bits (295), Expect = 7.385e-26
Identity = 58/100 (58.00%), Postives = 70/100 (70.00%), Query Frame = 1
Query:  133 ITNKVYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRTIPSFMLHRGDFPPQDGRVEESIQEKGGRNDHRPQKTTG 432
            +  KVYFD+ +  K AGRIVM L+   VP+TAENFRALCTGE+GIGKSGKPLHYKGS FHR IP FM   GDF   +G   ESI     ++++  +K TG
Sbjct:    2 VNPKVYFDMTVGDKAAGRIVMELYADTVPETAENFRALCTGERGIGKSGKPLHYKGSAFHRVIPKFMCQGGDFTAGNGTGGESIYGMKFKDENFVKKHTG 101          
BLAST of EY685487 vs. ExPASy Swiss-Prot
Match: CP19A_ARATH (Peptidyl-prolyl cis-trans isomerase CYP19-1 OS=Arabidopsis thaliana GN=CYP19-1 PE=1 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 9.645e-26
Identity = 57/97 (58.76%), Postives = 69/97 (71.13%), Query Frame = 1
Query:  142 KVYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRTIPSFMLHRGDFPPQDGRVEESIQEKGGRNDHRPQKTTG 432
            KVYFD+ + GK AGRIVM L+    P+TAENFRALCTGE+GIGK GKPLHYKGS+FHR IP FM   GDF   +G   ESI     ++++  +K TG
Sbjct:    6 KVYFDMTVGGKSAGRIVMELYADTTPETAENFRALCTGERGIGKQGKPLHYKGSSFHRVIPKFMCQGGDFTAGNGTGGESIYGSKFKDENFIKKHTG 102          
The following BLAST results are available for this feature:
BLAST of EY685487 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 150
Match NameE-valueIdentityDescription
CP20A_ARATH6.223e-4168.00Peptidyl-prolyl cis-trans isomerase CYP20-1 OS=Ara... [more]
CP19D_ARATH7.872e-3662.40Peptidyl-prolyl cis-trans isomerase CYP19-4 OS=Ara... [more]
PPIB_DICDI1.438e-2961.47Peptidyl-prolyl cis-trans isomerase B OS=Dictyoste... [more]
CYP7_CAEEL3.916e-2760.82Peptidyl-prolyl cis-trans isomerase 7 OS=Caenorhab... [more]
CYPH_SOLLC1.139e-2660.82Peptidyl-prolyl cis-trans isomerase OS=Solanum lyc... [more]
CYPH_LUPLU1.488e-2669.14Peptidyl-prolyl cis-trans isomerase OS=Lupinus lut... [more]
CYPH_MAIZE2.538e-2669.14Peptidyl-prolyl cis-trans isomerase OS=Zea mays GN... [more]
PPID_NEUCR7.385e-2661.5441 kDa peptidyl-prolyl cis-trans isomerase OS=Neur... [more]
CYPH_BRANA7.385e-2658.00Peptidyl-prolyl cis-trans isomerase OS=Brassica na... [more]
CP19A_ARATH9.645e-2658.76Peptidyl-prolyl cis-trans isomerase CYP19-1 OS=Ara... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C2-003-019-H06-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY685487 ID=EY685487; Name=EY685487; organism=Citrus sinensis; type=EST; length=999bp
GCGAAACGAGAAACAACGAAGTGATACATGGCTTCGACAAATTTGCTTCC
ACTCACGATGCTATGGGCTGTTGTCCTGTTGGCCACTTTCTCTTCAATTC
AGGCGAAGAAATCGGATCAGAATTTGAAAGAAATCACAAACAAAGTTTAC
TTTGACGTTGAGATTGCCGGAAAACCTGCCGGACGTATTGTAATGGGTCT
CTTTGGAAAGGCAGTCCCTAAAACTGCAGAAAATTTCCGAGCTTTGTGCA
CAGGGGAGAAAGGGATTGGCAAGAGTGGGAAGCCCCTCCACTACAAGGGA
AGTACCTTTCATAGGACCATTCCCAGCTTTATGCTCCACCGAGGTGATTT
CCCTCCTCAGGATGGAAGAGTGGAAGAGTCCATCCAAGAAAAGGGAGGGA
GGAACGACCACCGCCCCCAGAAGACCACCGGACGACAGCCAGCACGAAAA
GGGAGAAACTAACACAAGGCGCGGACGACGCCCCAGAACGACAGCCCGCG
CCCGCACAACCCGAGCCCCGCGACGGCGCAACCCGATCCATCGAGAGAAG
CAGCGCGCGCAAGAAGAAAGAGACGGAGCCATCGCGCGAACAACCACCCG
GATGCAGACCAGCAGCTGACCAGAAAGCGAGAAGACAAGAGAACAACAAC
CGAACCGACCACAGAACGAAGGCGAGAGGGGACGGACAACGGGGGGCACG
TACAACGGCCGAAGGAGGCGCGGCGGCAGCGGCGGCGCAGGGCAGAAGAC
GAAGGAGATAGACAAGAAGACCGACGCGGGGAAACTCACAGGAAACGCAG
CGCGAGCGCGCCTCAGCGACGCACGCACGGGAACGGACGAAGCGCGATGC
ACCGCCCCGGGCGGGGAACAGCGGAGAGCCAACAAAACCGAGAGCGCGCT
GGACCCGCGAAGCACCGCAGACGCGCAGCACAACGCCGTGACGACGAGCC
AGGAAAGACACGCAAACCACCGCATGGAGGACAAGAAGGACGAGGAAGA
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