EY685463

Overview
NameEY685463
Unique NameEY685463
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length877
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY685463 vs. ExPASy Swiss-Prot
Match: SCL14_ARATH (Scarecrow-like protein 14 OS=Arabidopsis thaliana GN=SCL14 PE=2 SV=2)

HSP 1 Score: 76.6406 bits (187), Expect = 3.993e-18
Identity = 53/154 (34.42%), Postives = 78/154 (50.65%), Query Frame = 3
Query:   69 QFRKGVEEANKFLPSENELFVNLEANRLSSWVPKGETNXXXXXXXXXXXXXXSS-------------NGSRGRKNPYR-EDVDLEEERSSKQAAIYSESPLRTEMFDMVLLCSGGQSPTVALREALKNASSKTVQQKGQSKGSNGAKGRGKKQS 488
            QF+KGVEEA+KFLP  ++LF++++     S++P    +                             N   G+K+ +R ED D  EERS+KQ+A+Y E    +EMFD +L+C  G+ P   L +     S+K V  +     SNGAK RGKK +
Sbjct:  236 QFKKGVEEASKFLPKSSQLFIDVD-----SYIPMNSGSKENGSEVFVKTEKKDETEHHHHHSYAPPPNRLTGKKSHWRDEDEDFVEERSNKQSAVYVEESELSEMFDKILVCGPGK-PVCILNQNFPTESAKVVTAQ-----SNGAKIRGKKST 378          

HSP 2 Score: 33.8834 bits (76), Expect = 3.993e-18
Identity = 15/28 (53.57%), Postives = 21/28 (75.00%), Query Frame = 1
Query:  493 KKRWWDLRSLLIPCAPAVAADDRKNAHQ 576
            KK   DLR+LL+ CA AV+ DDR+ A++
Sbjct:  387 KKETADLRTLLVLCAQAVSVDDRRTANE 414          
BLAST of EY685463 vs. ExPASy Swiss-Prot
Match: SCL9_ARATH (Scarecrow-like protein 9 OS=Arabidopsis thaliana GN=SCL9 PE=2 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 1.665e-15
Identity = 60/175 (34.29%), Postives = 86/175 (49.14%), Query Frame = 3
Query:   57 QSIWQFRKGVEEANKFLPSENELFVNLEANRLSSWVPKGETNXXXXXXXXXXXXXXSSNGSRGRKNPYREDVDLEEERSSKQAAIYSESPLRTEMFDMVLL-CSGGQSPTV--ALREALKNASSKTV-------QQKGQSKGSNGAKGRGKKQSGKKEVVGFEKSLDSLCTSCCR 551
            QS+W FR+ +EEAN+F P ENEL VN             E N                  S+ RKN  R+++ +EEERSSK  A++ E  LR+++ D +L+   GG+S     ALR+ LK    K         +++ + +G    +G G  Q+GKKEVV     L SL   C +
Sbjct:  210 QSVWLFRREIEEANRFNPEENELIVNFR-----------EENCV----------------SKARKNSSRDEICVEEERSSKLPAVFGEDILRSDVVDKILVHVPGGESMKEFNALRDVLKKGVEKKKASDAQGGKRRARGRGRGRGRGGGGGQNGKKEVV----DLRSLLIHCAQ 353          

HSP 2 Score: 20.4014 bits (41), Expect = 1.665e-15
Identity = 6/13 (46.15%), Postives = 9/13 (69.23%), Query Frame = 2
Query:  608 SPFGDGVHNIGNC 646
            +PFGDG   + +C
Sbjct:  375 TPFGDGNQRLAHC 387          
The following BLAST results are available for this feature:
BLAST of EY685463 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
SCL14_ARATH3.993e-1834.42Scarecrow-like protein 14 OS=Arabidopsis thaliana ... [more]
SCL9_ARATH1.665e-1534.29Scarecrow-like protein 9 OS=Arabidopsis thaliana G... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C2-003-019-E09-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY685463 ID=EY685463; Name=EY685463; organism=Citrus sinensis; type=EST; length=877bp
GACTGGTGGACTCTCCAAGCAGTTCTCTTCAGCTTCCTGATTGGAATAAT
GAGAGCCAATCTATATGGCAGTTCAGGAAGGGAGTTGAGGAGGCTAATAA
ATTCCTACCCAGTGAAAATGAGTTGTTTGTCAATTTGGAGGCTAATCGGT
TGTCATCGTGGGTGCCGAAGGGAGAGACTAACGAGGTTGCAGTGAAGGAG
GAGAAAGAAGAGGTGGAAGATGTTTCATCTAATGGATCAAGGGGAAGAAA
GAATCCTTACAGAGAGGATGTAGATTTAGAAGAAGAAAGAAGTAGCAAGC
AGGCAGCAATTTATTCAGAATCCCCACTGCGGACAGAGATGTTTGATATG
GTATTGCTTTGTTCAGGAGGTCAGTCTCCTACTGTTGCTCTTCGTGAGGC
CTTGAAAAATGCATCTAGCAAAACTGTGCAGCAGAAAGGACAATCAAAAG
GATCTAACGGTGCAAAGGGTCGTGGCAAGAAACAAAGTGGGAAAAAAGAG
GTGGTGGGATTTGAGAAGTCTCTTGATTCCTTGTGCACCAGCTGTTGCCG
CTGATGACCGAAAAAATGCACATCAATTCTTTGATAGCGAATAATGGCAC
CATTCCTTCTCCTTTTGGGGACGGAGTCCACAACATTGGAAATTGCTTAC
CTGATGGCCGCTGAGGAGGGCTAGGGTGGACTGGCGGACAGAAGGTCAAC
TGCTCAGGTATGAGACGCCACTGCCACCTGTTCGAAACGTCACCAGGATA
AACTATAGAGTCACGCGGCGGGCGATTGTCCAAGGCAGCAGTTGGGTTTT
TGGGGGTGGTGAGGTTGGTGTGTTTAGGACGCTATCTTCCCCCCGCCATC
TTCTCAAGAGCGGACCGGACCGCTATC
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