EY685326

Overview
NameEY685326
Unique NameEY685326
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length897
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY685326 vs. ExPASy Swiss-Prot
Match: CUL1_ARATH (Cullin-1 OS=Arabidopsis thaliana GN=CUL1 PE=1 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 3.672e-18
Identity = 44/49 (89.80%), Postives = 45/49 (91.84%), Query Frame = 3 
Query:   12 QQLVLECVEQLGRMFKPDFKAIKKRIEDLITRDYLERDKSNPNMFRYLA 158
            QQLV ECVEQL RMFKPD KAIKKR+EDLITRDYLERDK NPNMFRYLA
Sbjct:  690 QQLVSECVEQLSRMFKPDIKAIKKRMEDLITRDYLERDKENPNMFRYLA 738
The following BLAST results are available for this feature:
BLAST of EY685326 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
CUL1_ARATH3.672e-1889.80Cullin-1 OS=Arabidopsis thaliana GN=CUL1 PE=1 SV=1[more]
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Properties
Property NameValue
Genbank descriptionCS00-C2-003-013-F06-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY685326 ID=EY685326; Name=EY685326; organism=Citrus sinensis; type=EST; length=897bp
CCACGCGTCCGCAACAATTGGTATTGGAGTGTGTCGAGCAGTTGGGCCGC
ATGTTCAAGCCTGATTTCAAGGCAATCAAAAAGAGGATTGAAGATCTTAT
CACTCGAGACTATCTCGAGAGGGACAAATCTAATCCCAATATGTTCAGGT
ACTTGGCGTGATCTAGAGTGGTTGGTAATCCAGATGAAGTGGTGACATTT
GCTGCCCACAAAGAGGGTTAGTTCATGGTGGAACTGGGACAAACATATGT
AAACCGCCGCCAGGAGTGCCTTGTCTGGTGATTGCTCAGAAGCAGAGCTG
CGATGCTTGTACATTTTGCTGTTGGGCCAGGTGTGAGGAGCAGGTATAGA
TTTCGAACCCATGTTGGAGAAATAGTTATTCATTCCTTAATGTGGTTCAG
TGCGCCGGGGGGAGGGGATGCTGTTCTGTCTTCTTATTTCTGCCATCCCA
TTTCGTGACTTGATGTTTGATCTCGATTTCTCTCTCGTTTTCTTTTACAC
CTGCGTTCGCCTACTACAGACCCATCACAACTCTATCACACGCACGCTGG
TGCACGCGACACACGAGCAACCGACTGGAACGGCTCCGAGCAGAAGTGCC
GCTGCTGCGTGGGGACACGGCGCCCTGGCTAAACCGGCACTTCGACACTA
ACAACGACGTAGAAAAGAGAACACAAAGAGACAAACATACGAACGGACAA
GACCCCCGAGGCGAGGCCACAAGGAACCCGCGCGGGGCAGAGCGCCACCG
CCAAGCCCCGCCACCACGCCACATCTCAGCGCCCCACACCTCGCCAAACG
CCCCCCACGACGGCGCGAACACGACCCAGGCCCCCCGGCATCCCTGGCAC
CTACGGGCGCGACGCAACTGCAGATACTTCACCCTCTTACACCGCGC
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