EY685303

Overview
NameEY685303
Unique NameEY685303
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length972
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY685303 vs. ExPASy Swiss-Prot
Match: TCTP_HEVBR (Translationally-controlled tumor protein homolog OS=Hevea brasiliensis GN=TCTP PE=2 SV=1)

HSP 1 Score: 194.126 bits (492), Expect = 1.010e-48
Identity = 98/124 (79.03%), Postives = 102/124 (82.26%), Query Frame = 3
Query:   57 MLVYQDLLTGDELLSDSFPYKETENGILWEVEGKWVVQGAVDVDIGANPSXXXXXXXXXXXXXXXKVVDIVDTFRLQEQPAFDKKQFVTYMKRFIKLLTPKLSEERQEIFKRRVEGATNSLLSQ 428
            MLVYQDLLTGDELLSDSFPYKE  NGILWEVEGKWVVQGAVDVDIGANPS               KVVDIVDTFRLQEQPAFDKKQFVTYMKRFIKLLTPKL EE+QE FK+ +EGAT  LLS+
Sbjct:    1 MLVYQDLLTGDELLSDSFPYKEIHNGILWEVEGKWVVQGAVDVDIGANPSAEGADEDEGVDDQAVKVVDIVDTFRLQEQPAFDKKQFVTYMKRFIKLLTPKLDEEKQESFKKNIEGATKFLLSK 124          
BLAST of EY685303 vs. ExPASy Swiss-Prot
Match: TCTP_SOYBN (Translationally-controlled tumor protein homolog OS=Glycine max GN=TCTP PE=2 SV=1)

HSP 1 Score: 184.496 bits (467), Expect = 8.002e-46
Identity = 93/124 (75.00%), Postives = 101/124 (81.45%), Query Frame = 3
Query:   57 MLVYQDLLTGDELLSDSFPYKETENGILWEVEGKWVVQGAVDVDIGANPSXXXXXXXXXXXXXXXKVVDIVDTFRLQEQPAFDKKQFVTYMKRFIKLLTPKLSEERQEIFKRRVEGATNSLLSQ 428
            MLVYQDLLTGDELLSDSF YKE ENG+LWEVEGKWVV+GAVDVDIGANPS               KVVDIVDTFRLQEQPAFDKKQFVT+MKRFIK LTPKL  E+QE+FK+ +EGAT  LLS+
Sbjct:    1 MLVYQDLLTGDELLSDSFRYKEIENGMLWEVEGKWVVKGAVDVDIGANPSAEGGGEDEGVDDAAVKVVDIVDTFRLQEQPAFDKKQFVTFMKRFIKNLTPKLDAEQQELFKKHIEGATKYLLSK 124          
BLAST of EY685303 vs. ExPASy Swiss-Prot
Match: TCTP_ELAGV (Translationally-controlled tumor protein homolog OS=Elaeis guineensis var. tenera GN=TCTP PE=2 SV=1)

HSP 1 Score: 184.496 bits (467), Expect = 8.002e-46
Identity = 91/124 (73.39%), Postives = 101/124 (81.45%), Query Frame = 3
Query:   57 MLVYQDLLTGDELLSDSFPYKETENGILWEVEGKWVVQGAVDVDIGANPSXXXXXXXXXXXXXXXKVVDIVDTFRLQEQPAFDKKQFVTYMKRFIKLLTPKLSEERQEIFKRRVEGATNSLLSQ 428
            MLVYQDLLTGDELLSDSFPYKE  NG+LWEVEGKWV+QGAV+VDIGANPS               KVVDIVDTFRLQEQPAFDKKQFVT+MKR+IK LTPKL  E+QE+FK+ +EGAT  LLS+
Sbjct:    1 MLVYQDLLTGDELLSDSFPYKEIHNGMLWEVEGKWVIQGAVNVDIGANPSAEGGEEDEGVDDQAVKVVDIVDTFRLQEQPAFDKKQFVTFMKRYIKNLTPKLDAEKQELFKKHIEGATKFLLSK 124          
BLAST of EY685303 vs. ExPASy Swiss-Prot
Match: TCTP_SOLLC (Translationally-controlled tumor protein homolog OS=Solanum lycopersicum GN=TCTP PE=2 SV=1)

HSP 1 Score: 179.104 bits (453), Expect = 6.243e-45
Identity = 89/124 (71.77%), Postives = 98/124 (79.03%), Query Frame = 3
Query:   57 MLVYQDLLTGDELLSDSFPYKETENGILWEVEGKWVVQGAVDVDIGANPSXXXXXXXXXXXXXXXKVVDIVDTFRLQEQPAFDKKQFVTYMKRFIKLLTPKLSEERQEIFKRRVEGATNSLLSQ 428
            MLVYQDLLTGDELLSDSFPYKE ENG+LWEV+GKWVVQGAVDV+IGANPS               +VVDIVDTFRLQEQPAFDKKQFVT+MKR+IK LTPKL  E QE FK+ +E AT  LL +
Sbjct:    1 MLVYQDLLTGDELLSDSFPYKEVENGVLWEVQGKWVVQGAVDVNIGANPSAEGGCEDEGVDDQAVRVVDIVDTFRLQEQPAFDKKQFVTFMKRYIKNLTPKLEGETQEAFKKNIEAATKFLLQK 124          

HSP 2 Score: 23.8682 bits (50), Expect = 6.243e-45
Identity = 10/28 (35.71%), Postives = 14/28 (50.00%), Query Frame = 2
Query:  452 LGQTCHDAG*PALTYSKASTPDPPLYTI 535
            +G++ HD G     Y K  + DPP   I
Sbjct:  132 VGESMHDDGALVFAYYKEGSADPPFLYI 159          
BLAST of EY685303 vs. ExPASy Swiss-Prot
Match: TCTP_CUCMA (Translationally-controlled tumor protein homolog OS=Cucurbita maxima GN=TCTP PE=2 SV=1)

HSP 1 Score: 181.03 bits (458), Expect = 8.847e-45
Identity = 89/122 (72.95%), Postives = 97/122 (79.51%), Query Frame = 3
Query:   57 MLVYQDLLTGDELLSDSFPYKETENGILWEVEGKWVVQGAVDVDIGANPSXXXXXXXXXXXXXXXKVVDIVDTFRLQEQPAFDKKQFVTYMKRFIKLLTPKLSEERQEIFKRRVEGATNSLL 422
            MLVYQDLLTGDELLSDSFPYKE ENG++WEVEGKWVVQGAVDVDIGANPS               KVVDIVDTFRLQEQP  DKKQF+ Y+K+FIKLLTPKL  E+QE FK+ +EGAT  LL
Sbjct:    1 MLVYQDLLTGDELLSDSFPYKELENGMIWEVEGKWVVQGAVDVDIGANPSAEGDGEDEGVDDQAVKVVDIVDTFRLQEQPTMDKKQFIAYIKKFIKLLTPKLEGEKQEAFKKNIEGATKFLL 122          
BLAST of EY685303 vs. ExPASy Swiss-Prot
Match: TCTP_SOLTU (Translationally-controlled tumor protein homolog OS=Solanum tuberosum GN=TCTP PE=2 SV=2)

HSP 1 Score: 179.489 bits (454), Expect = 2.574e-44
Identity = 90/124 (72.58%), Postives = 99/124 (79.84%), Query Frame = 3
Query:   57 MLVYQDLLTGDELLSDSFPYKETENGILWEVEGKWVVQGAVDVDIGANPSXXXXXXXXXXXXXXXKVVDIVDTFRLQEQPAFDKKQFVTYMKRFIKLLTPKLSEERQEIFKRRVEGATNSLLSQ 428
            MLVYQDLLTGDELLSDSFPYKE +NG+LWEV+GKWVVQGAVDV+IGANPS               KVVDIVDTFRLQEQPAFDKKQFVTY+KR+IK LTPKL  E QE FK+ +E AT  LLS+
Sbjct:    1 MLVYQDLLTGDELLSDSFPYKEIQNGMLWEVQGKWVVQGAVDVNIGANPSAEGGGEDEGVDDQAVKVVDIVDTFRLQEQPAFDKKQFVTYIKRYIKNLTPKLEGEAQEAFKKNIESATKFLLSK 124          
BLAST of EY685303 vs. ExPASy Swiss-Prot
Match: TCTP_FRAAN (Translationally-controlled tumor protein homolog OS=Fragaria ananassa GN=TCTP PE=2 SV=1)

HSP 1 Score: 177.563 bits (449), Expect = 9.782e-44
Identity = 90/126 (71.43%), Postives = 101/126 (80.16%), Query Frame = 3
Query:   57 MLVYQDLLTGDELLSDSFPYKETENGILWEVEGKWVVQGAVDVDIGANPS--XXXXXXXXXXXXXXXKVVDIVDTFRLQEQPAFDKKQFVTYMKRFIKLLTPKLSEERQEIFKRRVEGATNSLLSQ 428
            MLVYQDLL+GDELLSDSFPYKE +NG+LWEV+GKWVVQGAVDVDIGANPS                 KVVDIVDTFRLQEQP FDKKQFVT++KR+IKLLTPKL  E+QE FK+ +EGAT  LLS+
Sbjct:    1 MLVYQDLLSGDELLSDSFPYKEIQNGVLWEVDGKWVVQGAVDVDIGANPSAEGADADADEGVDDQTVKVVDIVDTFRLQEQPPFDKKQFVTWVKRYIKLLTPKLEGEQQETFKKNIEGATKFLLSK 126          
BLAST of EY685303 vs. ExPASy Swiss-Prot
Match: TCTP_ORYSJ (Translationally-controlled tumor protein homolog OS=Oryza sativa subsp. japonica GN=TCTP PE=1 SV=1)

HSP 1 Score: 177.178 bits (448), Expect = 1.278e-43
Identity = 88/124 (70.97%), Postives = 98/124 (79.03%), Query Frame = 3
Query:   57 MLVYQDLLTGDELLSDSFPYKETENGILWEVEGKWVVQGAVDVDIGANPSXXXXXXXXXXXXXXXKVVDIVDTFRLQEQPAFDKKQFVTYMKRFIKLLTPKLSEERQEIFKRRVEGATNSLLSQ 428
            MLVYQDLLTGDELLSDSFPY+E ENGILWEV+GKWVVQGA+DVDIGANPS               KVVDIVDTFRLQEQP FDKKQFVT+MKR+IK L+ KL  E+QE FK+ +EGAT  LL +
Sbjct:    1 MLVYQDLLTGDELLSDSFPYREIENGILWEVDGKWVVQGAIDVDIGANPSAEGGGDDEGVDDQAVKVVDIVDTFRLQEQPPFDKKQFVTFMKRYIKNLSAKLDAEKQEEFKKNIEGATKYLLGK 124          
BLAST of EY685303 vs. ExPASy Swiss-Prot
Match: TCTP_ARATH (Translationally-controlled tumor protein homolog OS=Arabidopsis thaliana GN=TCTP PE=1 SV=2)

HSP 1 Score: 175.252 bits (443), Expect = 4.855e-43
Identity = 87/122 (71.31%), Postives = 96/122 (78.69%), Query Frame = 3
Query:   57 MLVYQDLLTGDELLSDSFPYKETENGILWEVEGKWVVQGAVDVDIGANPSXXXXXXXXXXXXXXXKVVDIVDTFRLQEQPAFDKKQFVTYMKRFIKLLTPKLSEERQEIFKRRVEGATNSLL 422
            MLVYQDLLTGDELLSDSFPYKE ENGILWEVEGKWV  GAVDV+IGANPS               KVVDIVDTFRLQEQP +DKK F+ Y+K++IKLLTPKLSEE Q +FK+ +EGAT  LL
Sbjct:    1 MLVYQDLLTGDELLSDSFPYKEIENGILWEVEGKWVTVGAVDVNIGANPSAEEGGEDEGVDDSTQKVVDIVDTFRLQEQPTYDKKGFIAYIKKYIKLLTPKLSEEDQAVFKKGIEGATKFLL 122          
BLAST of EY685303 vs. ExPASy Swiss-Prot
Match: TCTP_PEA (Translationally-controlled tumor protein homolog OS=Pisum sativum GN=TCTP PE=2 SV=2)

HSP 1 Score: 168.703 bits (426), Expect = 4.544e-41
Identity = 85/124 (68.55%), Postives = 98/124 (79.03%), Query Frame = 3
Query:   57 MLVYQDLLTGDELLSDSFPYKETENGILWEVEGKWVVQGAVDVDIGANPSXXXXXXXXXXXXXXXKVVDIVDTFRLQEQPAFDKKQFVTYMKRFIKLLTPKLSEERQEIFKRRVEGATNSLLSQ 428
            MLVYQDLLTGDELLSDS+PYKE ENG+LWEVEGKWVV+GAVDV+IGANPS               KVVDIVD FRLQEQP FDKKQF+ ++K++IKLLTPKL  E+QE FK+ +EGAT  LL +
Sbjct:    1 MLVYQDLLTGDELLSDSYPYKEIENGMLWEVEGKWVVKGAVDVNIGANPS-AEGGEDEGVDDTAVKVVDIVDVFRLQEQPPFDKKQFLGFVKKYIKLLTPKLEAEKQEHFKKNIEGATKYLLGK 123          
The following BLAST results are available for this feature:
BLAST of EY685303 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 31
Match NameE-valueIdentityDescription
TCTP_HEVBR1.010e-4879.03Translationally-controlled tumor protein homolog O... [more]
TCTP_SOYBN8.002e-4675.00Translationally-controlled tumor protein homolog O... [more]
TCTP_ELAGV8.002e-4673.39Translationally-controlled tumor protein homolog O... [more]
TCTP_SOLLC6.243e-4571.77Translationally-controlled tumor protein homolog O... [more]
TCTP_CUCMA8.847e-4572.95Translationally-controlled tumor protein homolog O... [more]
TCTP_SOLTU2.574e-4472.58Translationally-controlled tumor protein homolog O... [more]
TCTP_FRAAN9.782e-4471.43Translationally-controlled tumor protein homolog O... [more]
TCTP_ORYSJ1.278e-4370.97Translationally-controlled tumor protein homolog O... [more]
TCTP_ARATH4.855e-4371.31Translationally-controlled tumor protein homolog O... [more]
TCTP_PEA4.544e-4168.55Translationally-controlled tumor protein homolog O... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C2-003-013-C07-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY685303 ID=EY685303; Name=EY685303; organism=Citrus sinensis; type=EST; length=972bp
CCAGTTTTCTCCGTTGATTATTTTTCTTTTTTGTGTTCGCGAGAGAGACT
GCAATCATGTTGGTCTATCAAGATCTCCTCACCGGTGATGAGCTTCTCTC
CGACTCTTTTCCCTACAAGGAAACTGAGAATGGGATTCTGTGGGAAGTTG
AGGGAAAGTGGGTTGTACAAGGAGCCGTTGATGTTGACATTGGTGCAAAT
CCTTCTGCCGAAGGAGCTGATGAGGATGAGGGTGTTGATGACCAAGCCGT
GAAGGTGGTCGACATTGTCGACACATTCAGGCTGCAGGAGCAACCTGCTT
TTGACAAGAAGCAGTTTGTAACATACATGAAGAGATTCATCAAGTTGCTG
ACGCCCAAGCTGAGTGAGGAGAGGCAGGAGATATTTAAGAGGAGGGTGGA
GGGAGCCACCAACTCCTTGCTCTCGCAGGCTCCGGGGGCCCTCATTCTCT
GTTGGGGCAAACTTGTCATGATGCAGGTTGACCTGCCCTTACTTACTCCA
AGGCATCCACCCCCGACCCCCCACTCTACACTATCGATACATACCTCGTC
AGGGCCCGCACCGCCACCCATCCTACTACAAATCGCAAACAACGCTGATC
CTCAGGGGCGCCAATAGGAACCGAGGACAATCCCCCCGAACCCCGTACGG
ACAGCACCCTTATATCCCGTATCGACACCGCCTGTCTGACAGATTTCGAG
GCGCGAGCCAGAAAGCTAGCCAGTCGACGCCACAGCGACACGCTACGGGC
AGCGAGACATACATCACGCCCGTCCTGCTGGCTTATAACCTCTATACTCG
GCGTCGTCCGCGCCCCCCTCCCCATCACCCAGCTCGCCTCCCGCCTGCCC
ACTGCGTCGCGCCCCGCATAAGCGGCTACACTACGGCAGACCAGACCTCA
ATGTATGCAGCGACAGCTGCCCAACATGGAAGTGACCAACCCCCAGCCTC
CACTCACCCTTTTCTACACCTG
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