EY685279
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY685279 vs. ExPASy Swiss-Prot
Match: KTNB1_ARATH (Katanin p80 WD40 repeat-containing subunit B1 homolog 1 OS=Arabidopsis thaliana GN=At5g23430 PE=2 SV=3) HSP 1 Score: 179.874 bits (455), Expect = 1.739e-44 Identity = 89/171 (52.05%), Postives = 127/171 (74.27%), Query Frame = 3 Query: 192 NEGEAVESLMETHDIFISTLRSRLTKLQVVRHFWERNDIKGGINALRKLPDHSVQADVMSVLMEKMEILNLDLFSCLLPMLMGLLDSKMERHASISLEMLLKLVVVFGPMIHSTLSAPPAVGVDLHAEQRQECCNRCFMQLQKIQKILPILERRGGLLAKCAHELNLILQE 704 +E VE +M H+ F+S+++SRL KLQVVR +WERND+K I ++ K+ D++V ADV+ ++ E+ EIL LD + LLP+L LL S M++H S+SL++LLKLV ++G I+S+LSAP +VGVD+ AEQR E +RCF++L+K++ LP L RRGGL+AK ELNL QE Sbjct: 664 SEENIVEDIMGKHNQFVSSMQSRLAKLQVVRRYWERNDVKNSIGSIEKMADNAVTADVLGIITERNEILTLDNCTSLLPLLTALLGSGMDQHLSVSLDLLLKLVRLYGSPIYSSLSAPASVGVDIEAEQRIERYSRCFVELEKVKACLPSLARRGGLVAKSVLELNLAFQE 834
BLAST of EY685279 vs. ExPASy Swiss-Prot
Match: KTNB1_XENLA (Katanin p80 WD40-containing subunit B1 OS=Xenopus laevis GN=katnb1 PE=1 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 5.096e-20 Identity = 54/180 (30.00%), Postives = 89/180 (49.44%), Query Frame = 3 Query: 159 PQISGRDTTVANEGEAVESLMETHDIFISTLRSRLTKLQVVRHFWERNDIKGGINALRKLPDHSVQADVMSVLMEKMEILNLDLFSCLLPMLMGLLDSKMERHASISLEMLLKLVVVFGPMIHSTLSAPPAVGVDLHAEQRQECCNRCFMQLQKIQKILPILERRGGLLAKCAHELNLIL 698 P + T + EAV + + HD L SR+ L VR W DIK I++ + D SV D+++++ +K + LDL +LP + +L SK E + L ++ F P+I L+APP+VGVD+ E+R C C+ QL+ + ++ + G EL+L++ Sbjct: 472 PAVKSSSPTEVVDDEAVSQIRKGHDTMCMVLTSRMRNLDTVRAVWSSGDIKTSIDSAVAINDLSVVVDLLNIINQKASLWKLDLCMTVLPQIEKMLQSKYESYVQTGCISLKLILQRFLPLITDILAAPPSVGVDISREERLSKCKLCYKQLRILSPLVKSKASQSGRYGSAFRELHLLM 651
BLAST of EY685279 vs. ExPASy Swiss-Prot
Match: KTNB1_XENTR (Katanin p80 WD40-containing subunit B1 OS=Xenopus tropicalis GN=katnb1 PE=2 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 1.135e-19 Identity = 54/180 (30.00%), Postives = 89/180 (49.44%), Query Frame = 3 Query: 159 PQISGRDTTVANEGEAVESLMETHDIFISTLRSRLTKLQVVRHFWERNDIKGGINALRKLPDHSVQADVMSVLMEKMEILNLDLFSCLLPMLMGLLDSKMERHASISLEMLLKLVVVFGPMIHSTLSAPPAVGVDLHAEQRQECCNRCFMQLQKIQKILPILERRGGLLAKCAHELNLIL 698 P + T + EAV + + HD L SR+ L VR W DIK I++ + D SV D+++++ +K + LDL +LP + +L SK E + L ++ F P+I L+APP+VGVD+ E+R C C+ QL+ + ++ + G EL+L++ Sbjct: 472 PAVKTSSPTEVVDDEAVSQIRKGHDTMCMVLTSRMRNLDTVRAVWSSGDIKTSIDSAVAINDLSVVVDLLNIINQKASLWKLDLCLTVLPQIEKMLQSKYESYVQTGCISLKLILQRFLPLITDILAAPPSVGVDISREERLSKCKLCYKQLRILSPLVKSKASQSGRYGSAFRELHLLM 651
BLAST of EY685279 vs. ExPASy Swiss-Prot
Match: KTNB1_DANRE (Katanin p80 WD40-containing subunit B1 OS=Danio rerio GN=katnb1 PE=2 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 1.255e-18 Identity = 50/166 (30.12%), Postives = 85/166 (51.20%), Query Frame = 3 Query: 201 EAVESLMETHDIFISTLRSRLTKLQVVRHFWERNDIKGGINALRKLPDHSVQADVMSVLMEKMEILNLDLFSCLLPMLMGLLDSKMERHASISLEMLLKLVVVFGPMIHSTLSAPPAVGVDLHAEQRQECCNRCFMQLQKIQKILPILERRGGLLAKCAHELNLIL 698 EA+ + + HD L SR L VR W D+K +++ + D S+ DV++++ K + LDL + +LP + LL S+ E + L ++ F P+I TL+APP+VGVD+ E+R + C C+ QL+ + ++ + G EL L++ Sbjct: 524 EALAQIRKGHDTMCVMLSSRSKNLDSVRSVWASGDVKTSLDSAVSMNDLSIVVDVLNIINLKPSLWKLDLCTSILPQIEELLQSRYESYVQTGCMSLKLILKRFWPLISDTLNAPPSVGVDITREERHQKCKACYKQLKNLSNVVKNRAEQVGRHGSTFRELQLLM 689
BLAST of EY685279 vs. ExPASy Swiss-Prot
Match: KTNB1_MOUSE (Katanin p80 WD40-containing subunit B1 OS=Mus musculus GN=Katnb1 PE=1 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 2.141e-18 Identity = 52/166 (31.33%), Postives = 84/166 (50.60%), Query Frame = 3 Query: 201 EAVESLMETHDIFISTLRSRLTKLQVVRHFWERNDIKGGINALRKLPDHSVQADVMSVLMEKMEILNLDLFSCLLPMLMGLLDSKMERHASISLEMLLKLVVVFGPMIHSTLSAPPAVGVDLHAEQRQECCNRCFMQLQKIQKILPILERRGGLLAKCAHELNLIL 698 +A+ + + HD L SR L VR W DIK +++ + D SV D+++++ +K + LDL + +LP + LL SK E + L ++ F P+I L+APP+VGVD+ E+R C CF QL+ I ++ G EL+L++ Sbjct: 489 DAMSQIRKGHDTMFVVLTSRHKNLDTVRAVWTTGDIKTSVDSAVAINDLSVVVDLLNIVNQKASLWKLDLCTTVLPQIEKLLQSKYESYVQTGCTSLKLILQRFLPLITDILAAPPSVGVDISREERLHKCRLCFKQLKSISGLVKSKSGLSGRHGSAFRELHLLM 654
BLAST of EY685279 vs. ExPASy Swiss-Prot
Match: KTNB1_HUMAN (Katanin p80 WD40-containing subunit B1 OS=Homo sapiens GN=KATNB1 PE=1 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 8.135e-18 Identity = 51/166 (30.72%), Postives = 84/166 (50.60%), Query Frame = 3 Query: 201 EAVESLMETHDIFISTLRSRLTKLQVVRHFWERNDIKGGINALRKLPDHSVQADVMSVLMEKMEILNLDLFSCLLPMLMGLLDSKMERHASISLEMLLKLVVVFGPMIHSTLSAPPAVGVDLHAEQRQECCNRCFMQLQKIQKILPILERRGGLLAKCAHELNLIL 698 +A+ + + HD L SR L VR W DIK +++ + D SV D+++++ +K + LDL + +LP + LL SK E + L ++ F P+I L+APP+VGVD+ E+R C C+ QL+ I ++ G EL+L++ Sbjct: 486 DAMSQIRKGHDTMCVVLTSRHKNLDTVRAVWTMGDIKTSVDSAVAINDLSVVVDLLNIVNQKASLWKLDLCTTVLPQIEKLLQSKYESYVQTGCTSLKLILQRFLPLITDMLAAPPSVGVDISREERLHKCRLCYKQLKSISGLVKSKSGLSGRHGSTFRELHLLM 651
BLAST of EY685279 vs. ExPASy Swiss-Prot
Match: KTNB1_STRPU (Katanin p80 WD40-containing subunit B1 OS=Strongylocentrotus purpuratus GN=KATNB1 PE=1 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 1.812e-17 Identity = 48/182 (26.37%), Postives = 90/182 (49.45%), Query Frame = 3 Query: 159 PQISGRDTTVANEGEAVESLMETHDIFISTLRSRLTKLQVVRHFWERNDIKGGINALRKLPDHSVQADVMSVLMEKMEILNLDLFSCLLPMLMGLLDSKMERHASISLEMLLKLVVVFGPMIHSTLSAPPAVGVDLHAEQRQECCNRCFMQLQKIQKILPILERRGGLLAKCAHELNLILQE 704 P+++ + ++ E +E L + HD L SR L VVR W D K + ++ + D ++ D++++++ K + NLD+ +LP L LL SK E + S L ++ F + + + PP+ G+D+ E+R C++C+ L + + + G L EL+L+L + Sbjct: 508 PRVNAPASRKQSDSERIEGLRKGHDSMCQVLSSRHRNLDVVRAIWTAGDAKTSVESVVNMKDQAILVDILNIMLLKKSLWNLDMCVVVLPRLKELLSSKYENYVHTSCACLKLILKNFTSLFNQNIKCPPS-GIDITREERYNKCSKCYSYLIATRGYVEEKQHVSGKLGSSFRELHLLLDQ 688
BLAST of EY685279 vs. ExPASy Swiss-Prot
Match: KTNB1_CHICK (Katanin p80 WD40-containing subunit B1 OS=Gallus gallus GN=KATNB1 PE=2 SV=2) HSP 1 Score: 88.9669 bits (219), Expect = 4.037e-17 Identity = 51/180 (28.33%), Postives = 85/180 (47.22%), Query Frame = 3 Query: 159 PQISGRDTTVANEGEAVESLMETHDIFISTLRSRLTKLQVVRHFWERNDIKGGINALRKLPDHSVQADVMSVLMEKMEILNLDLFSCLLPMLMGLLDSKMERHASISLEMLLKLVVVFGPMIHSTLSAPPAVGVDLHAEQRQECCNRCFMQLQKIQKILPILERRGGLLAKCAHELNLIL 698 P + + + E + + + H L SR L VR W +D+K ++A D SV D+++++ + + LDL + +LP + LL SK E + L ++ F P+I L+APP+VGVD+ E+R C C+ QL+ I I+ G EL+L++ Sbjct: 474 PALKNQSQAELTDEEIMSQIRKGHKTVCMVLTSRHKNLDTVRAVWSTSDMKNSVDAAVATNDLSVVVDLLNIVNQTASLWKLDLCTVVLPQIEKLLQSKYESYVQTGCTSLKLILQRFLPLITDILAAPPSVGVDITREERLHKCRLCYKQLKNISNIVKNKSGLSGRHGSAFRELHLLM 653 The following BLAST results are available for this feature:
BLAST of EY685279 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 8
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >EY685279 ID=EY685279; Name=EY685279; organism=Citrus sinensis; type=EST; length=894bpback to top |