EY685274
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of EY685274 vs. ExPASy Swiss-Prot
Match: FMDA_METME (Formamidase OS=Methylophilus methylotrophus GN=fmdA PE=1 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 4.607e-25 Identity = 57/136 (41.91%), Postives = 76/136 (55.88%), Query Frame = 1 Query: 211 FCGAIAMNRFLDLFCKILPGGMYAEPVAPMAPTPLLVIPIFDI*PCEPGFSKWVMYEGIIVYDSGRPHYLYATAAYSHASLYAIDYLSIFGYSDEQVYLLLSCCPCERRISGIDDSPNAVATLAVPTAIFDHDIRP 618 FCGAI M +LD+ ++ G+ + P+F P P + ++++EGI V ++G+ HYL AY A L AI+YL FGYS EQ +L P E ISGI D PNA ATL +PT IF+ DIRP Sbjct: 262 FCGAIEMAGYLDIKVGLIKDGVKKYGIKN---------PVFQPSPITPTYRDYMIFEGISVDEAGKQHYLDVHIAYRQACLNAIEYLKKFGYSGEQAVSILGTAPVEGHISGIVDIPNACATLWIPTEIFEFDIRP 388 HSP 2 Score: 28.8758 bits (63), Expect = 4.607e-25 Identity = 11/21 (52.38%), Postives = 15/21 (71.43%), Query Frame = 2 Query: 47 AMDAAKTIPRTDIGGYCDIRN 109 A + A+T+P D GG CDI+N Sbjct: 208 AAEGARTVPPRDHGGNCDIKN 228 HSP 3 Score: 25.7942 bits (55), Expect = 4.607e-25 Identity = 11/27 (40.74%), Postives = 16/27 (59.26%), Query Frame = 3 Query: 132 YHPEVEGETYLSTANIHCSPGDGEVSF 212 Y P + LS ++H S GDGE++F Sbjct: 236 YFPVYVKDGGLSMGDLHFSQGDGEITF 262
BLAST of EY685274 vs. ExPASy Swiss-Prot
Match: FMDA_SCHPO (Putative formamidase C869.04 OS=Schizosaccharomyces pombe GN=SPAC869.04 PE=2 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 1.485e-22 Identity = 56/138 (40.58%), Postives = 79/138 (57.25%), Query Frame = 1 Query: 211 FCGAIAMNRFLDLFCKILPGGMYAEPVAPMAPTPLLVIPIFDI*PCEPGFS--KWVMYEGIIVYDSGRPHYLYATAAYSHASLYAIDYLSIFGYSDEQVYLLLSCCPCERRISGIDDSPNAVATLAVPTAIFDHDIRP 618 FCGAI M + + CKIL G ++ +A + +P P EP FS +++ +EG V +SG+ HYL T AY L I+Y FGY+D Q+YLLLSC P + ++GI D PN+ T+ VP IF+ D+ P Sbjct: 265 FCGAIEMAGSITIKCKILKNG-----ISDLAMKSPMYLPG----PVEPHFSPSRYLTFEGFSVDESGKQHYLCTTTAYRQTCLRVIEYFRRFGYNDYQLYLLLSCAPIQGHVAGIVDIPNSCTTIGVPMDIFEFDVSP 393 HSP 2 Score: 25.7942 bits (55), Expect = 1.485e-22 Identity = 10/17 (58.82%), Postives = 13/17 (76.47%), Query Frame = 3 Query: 162 LSTANIHCSPGDGEVSF 212 LS ++H S GDGE+SF Sbjct: 249 LSIGDLHFSQGDGEISF 265
BLAST of EY685274 vs. ExPASy Swiss-Prot
Match: AMDA_MYCSM (Acetamidase OS=Mycobacterium smegmatis GN=amdA PE=1 SV=2) HSP 1 Score: 70.4774 bits (171), Expect = 6.227e-15 Identity = 43/109 (39.45%), Postives = 59/109 (54.13%), Query Frame = 1 Query: 208 HFCGAIAMNRFLDLFCKILPGGMYAEPVAPMAPTPLLVIPIFDI*PCEPGFSKWVMYEGIIV-YDSGRPHYLYATAAYSHASLYAIDYLSIFGYSDEQVYLLLSCCPCE 531 +FCGAI M F+D+ ++ GGM V PIF EP +S+W+ + GI V + R Y+ AT AY +A L AI+YL +GY+ EQ YL+L P E Sbjct: 269 NFCGAIEMGGFIDMHVDLIKGGMETYGVTTN--------PIFMPGRVEPLYSEWLTFIGISVDHAENRNAYMDATMAYRNACLNAIEYLKKWGYTGEQAYLILGTSPIE 369 HSP 2 Score: 26.1794 bits (56), Expect = 6.227e-15 Identity = 12/25 (48.00%), Postives = 16/25 (64.00%), Query Frame = 2 Query: 35 LVCIAMDAAKTIPRTDIGGYCDIRN 109 L IA D A+T+P + GG DI+N Sbjct: 212 LQAIANDGARTVPPRENGGNHDIKN 236 HSP 3 Score: 25.0238 bits (53), Expect = 6.227e-15 Identity = 12/23 (52.17%), Postives = 16/23 (69.57%), Query Frame = 3 Query: 144 VEGETYLSTANIHCSPGDGEVSF 212 VEG LS ++H S GDGE++F Sbjct: 249 VEG-AMLSGGDLHFSQGDGEINF 270 The following BLAST results are available for this feature:
BLAST of EY685274 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 3
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >EY685274 ID=EY685274; Name=EY685274; organism=Citrus sinensis; type=EST; length=922bpback to top |