EY710424

Overview
NameEY710424
Unique NameEY710424
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1026
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY710424 vs. ExPASy Swiss-Prot
Match: FER3_ARATH (Ferredoxin-3, chloroplastic OS=Arabidopsis thaliana GN=FD3 PE=1 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 9.073e-39
Identity = 57/100 (57.00%), Postives = 72/100 (72.00%), Query Frame = 3
Query:   81 MSTVTLSAPCMVKAAPRNQLSRNLIKSPT---SLGSVKGIS*TFGLKCSPNFQASM--AVYKIKLIGPKGEEHEFEAQEDQYILDATEEAGVDLPYSCRA 365
            M+TV +S+  M KA  R+Q +  LI + +   S+GS K +S +FGLKCS N   +   AVYK+KL+GP G+E EFE Q+DQYILDA EEAGVDLPYSCRA
Sbjct:    1 MATVRISSTSMTKAVLRSQTTNKLITNKSYNLSVGSTKRVSRSFGLKCSANSGGATMSAVYKVKLLGPDGQEDEFEVQDDQYILDAAEEAGVDLPYSCRA 100          

HSP 2 Score: 75.485 bits (184), Expect = 9.073e-39
Identity = 32/49 (65.31%), Postives = 40/49 (81.63%), Query Frame = 1
Query:  349 PIPAALGACSTCAGKLVSGSVDQSDGSFLDDNQLEAGYLLTCITYPNSN 495
            P     GACSTCAG++VSG+VDQSDGSFL+D+ LE GY+LTC+ YP S+
Sbjct:   95 PYSCRAGACSTCAGQIVSGNVDQSDGSFLEDSHLEKGYVLTCVAYPQSD 143          
BLAST of EY710424 vs. ExPASy Swiss-Prot
Match: FER3_MAIZE (Ferredoxin-3, chloroplastic OS=Zea mays GN=FDX3 PE=2 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 5.604e-35
Identity = 50/97 (51.55%), Postives = 63/97 (64.95%), Query Frame = 3
Query:   81 MSTVTLSAPCMVKAAPRN-QLSRNLIKSPTSLGSVKGIS*TFGLKCSPNFQAS-MAVYKIKLIGPKGEEHEFEAQEDQYILDATEEAGVDLPYSCRA 365
            MST T +  C +    R  Q S+  +KSP+SL     ++    LK S     S MAVYK+KL+GP+GEEHEF+A +D YILDA E AGV+LPYSCRA
Sbjct:    1 MSTSTFATSCTLLGNVRTTQASQTAVKSPSSLSFFSQVTKVPSLKTSKKLDVSAMAVYKVKLVGPEGEEHEFDAPDDAYILDAAETAGVELPYSCRA 97          

HSP 2 Score: 77.0258 bits (188), Expect = 5.604e-35
Identity = 34/49 (69.39%), Postives = 39/49 (79.59%), Query Frame = 1
Query:  349 PIPAALGACSTCAGKLVSGSVDQSDGSFLDDNQLEAGYLLTCITYPNSN 495
            P     GACSTCAGK+ SGSVDQSDGSFLDD Q E GY+LTC++YP S+
Sbjct:   92 PYSCRAGACSTCAGKIESGSVDQSDGSFLDDGQQEEGYVLTCVSYPKSD 140          
BLAST of EY710424 vs. ExPASy Swiss-Prot
Match: FER2_RAPSA (Ferredoxin, root R-B2 OS=Raphanus sativus PE=1 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 2.594e-28
Identity = 35/42 (83.33%), Postives = 40/42 (95.24%), Query Frame = 3
Query:  240 AVYKIKLIGPKGEEHEFEAQEDQYILDATEEAGVDLPYSCRA 365
            AVYK+KLIGP+GEE+EFE Q+DQ+ILDA EEAGVDLPYSCRA
Sbjct:    2 AVYKVKLIGPEGEENEFEVQDDQFILDAAEEAGVDLPYSCRA 43          

HSP 2 Score: 68.9366 bits (167), Expect = 2.594e-28
Identity = 28/49 (57.14%), Postives = 37/49 (75.51%), Query Frame = 1
Query:  349 PIPAALGACSTCAGKLVSGSVDQSDGSFLDDNQLEAGYLLTCITYPNSN 495
            P     GACSTCAG++V G VDQS+GSFL+D+  E G++LTC+ YP S+
Sbjct:   38 PYSCRAGACSTCAGQIVKGQVDQSEGSFLEDDHFEKGFVLTCVAYPQSD 86          
BLAST of EY710424 vs. ExPASy Swiss-Prot
Match: FER1_RAPSA (Ferredoxin, root R-B1 OS=Raphanus sativus PE=1 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 7.456e-28
Identity = 33/42 (78.57%), Postives = 38/42 (90.48%), Query Frame = 3
Query:  240 AVYKIKLIGPKGEEHEFEAQEDQYILDATEEAGVDLPYSCRA 365
            AVYK+KLIGP G+E+EF+  +DQYILDA EEAGVDLPYSCRA
Sbjct:    2 AVYKVKLIGPDGQENEFDVPDDQYILDAAEEAGVDLPYSCRA 43          

HSP 2 Score: 71.2478 bits (173), Expect = 7.456e-28
Identity = 30/49 (61.22%), Postives = 36/49 (73.47%), Query Frame = 1
Query:  349 PIPAALGACSTCAGKLVSGSVDQSDGSFLDDNQLEAGYLLTCITYPNSN 495
            P     GACSTCAGK+  G VDQSDGSFL+D+  E GY+LTC+ YP S+
Sbjct:   38 PYSCRAGACSTCAGKIEKGQVDQSDGSFLEDHHFEKGYVLTCVAYPQSD 86          
BLAST of EY710424 vs. ExPASy Swiss-Prot
Match: FER6_MAIZE (Ferredoxin-6, chloroplastic OS=Zea mays GN=FDX6 PE=2 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.087e-25
Identity = 29/49 (59.18%), Postives = 38/49 (77.55%), Query Frame = 1
Query:  349 PIPAALGACSTCAGKLVSGSVDQSDGSFLDDNQLEAGYLLTCITYPNSN 495
            P     G+CSTCAG++ +G VDQS+GSFLDD Q+  GYLLTCI+YP ++
Sbjct:   95 PFSCRAGSCSTCAGRMSAGEVDQSEGSFLDDGQMAEGYLLTCISYPKAD 143          

HSP 2 Score: 68.1662 bits (165), Expect = 1.087e-25
Identity = 33/56 (58.93%), Postives = 42/56 (75.00%), Query Frame = 3
Query:  204 GLKCSPNFQASMA--VYKIKLIGPKGEEHEFEAQEDQYILDATEEAGVDLPYSCRA 365
            G + S  F AS A  ++K+KL+GP G EHEFEA +D YIL+A E AGV+LP+SCRA
Sbjct:   45 GPRLSSRFVASAAAVLHKVKLVGPDGTEHEFEAPDDTYILEAAETAGVELPFSCRA 100          
BLAST of EY710424 vs. ExPASy Swiss-Prot
Match: FER1_ARATH (Ferredoxin-1, chloroplastic OS=Arabidopsis thaliana GN=FD1 PE=1 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 4.072e-25
Identity = 30/49 (61.22%), Postives = 38/49 (77.55%), Query Frame = 1
Query:  349 PIPAALGACSTCAGKLVSGSVDQSDGSFLDDNQLEAGYLLTCITYPNSN 495
            P     G+CS+CAGK+VSGS+DQSD SFLDD Q+  GY+LTC+ YP S+
Sbjct:   88 PYSCRAGSCSSCAGKVVSGSIDQSDQSFLDDEQMSEGYVLTCVAYPTSD 136          

HSP 2 Score: 64.6994 bits (156), Expect = 4.072e-25
Identity = 34/58 (58.62%), Postives = 41/58 (70.69%), Query Frame = 3
Query:  201 FGLKCSP---NFQASMAVYKIKLIGPKGEEHEFEAQEDQYILDATEEAGVDLPYSCRA 365
            FGLK S        +MA YK+K I P+GE+ E E +ED Y+LDA EEAG+DLPYSCRA
Sbjct:   37 FGLKSSTARGGRVTAMATYKVKFITPEGEQ-EVECEEDVYVLDAAEEAGLDLPYSCRA 93          
BLAST of EY710424 vs. ExPASy Swiss-Prot
Match: FER1_PEA (Ferredoxin-1, chloroplastic OS=Pisum sativum GN=PETF PE=1 SV=2)

HSP 1 Score: 74.7146 bits (182), Expect = 8.978e-25
Identity = 31/49 (63.27%), Postives = 39/49 (79.59%), Query Frame = 1
Query:  349 PIPAALGACSTCAGKLVSGSVDQSDGSFLDDNQLEAGYLLTCITYPNSN 495
            P     G+CS+CAGK+V G VDQSDGSFLDD Q+EAG++LTC+ YP S+
Sbjct:   88 PYSCRAGSCSSCAGKVVGGEVDQSDGSFLDDEQIEAGFVLTCVAYPTSD 136          

HSP 2 Score: 60.8474 bits (146), Expect = 8.978e-25
Identity = 36/72 (50.00%), Postives = 44/72 (61.11%), Query Frame = 3
Query:  162 PTSLGSVKGIS*TF-GLKCS---PNFQASMAVYKIKLIGPKGEEHEFEAQEDQYILDATEEAGVDLPYSCRA 365
            P S+ + K  S  F GLK S    +   +MA YK+KL+ P G + EFE   D YILD  EE G+DLPYSCRA
Sbjct:   23 PMSVTTTKAFSNGFLGLKTSLKRGDLAVAMASYKVKLVTPDGTQ-EFECPSDVYILDHAEEVGIDLPYSCRA 93          
BLAST of EY710424 vs. ExPASy Swiss-Prot
Match: FER_SYNY4 (Ferredoxin OS=Synechocystis sp. (strain PCC 6714) PE=1 SV=2)

HSP 1 Score: 77.0258 bits (188), Expect = 2.039e-24
Identity = 33/49 (67.35%), Postives = 40/49 (81.63%), Query Frame = 1
Query:  349 PIPAALGACSTCAGKLVSGSVDQSDGSFLDDNQLEAGYLLTCITYPNSN 495
            P     GACSTCAGK+ +GSVDQSD SFLDD+Q+EAGY+LTC+ YP S+
Sbjct:   37 PYSCRAGACSTCAGKITAGSVDQSDQSFLDDDQIEAGYVLTCVAYPTSD 85          

HSP 2 Score: 57.3806 bits (137), Expect = 2.039e-24
Identity = 28/43 (65.12%), Postives = 32/43 (74.42%), Query Frame = 3
Query:  237 MAVYKIKLIGPKGEEHEFEAQEDQYILDATEEAGVDLPYSCRA 365
            MA Y +KLI P GE +  E  +D YILDA EEAG+DLPYSCRA
Sbjct:    1 MASYTVKLITPDGE-NSIECSDDTYILDAAEEAGLDLPYSCRA 42          
BLAST of EY710424 vs. ExPASy Swiss-Prot
Match: FER_NOSMU (Ferredoxin OS=Nostoc muscorum PE=1 SV=2)

HSP 1 Score: 79.7221 bits (195), Expect = 2.654e-24
Identity = 35/49 (71.43%), Postives = 41/49 (83.67%), Query Frame = 1
Query:  349 PIPAALGACSTCAGKLVSGSVDQSDGSFLDDNQLEAGYLLTCITYPNSN 495
            P     GACSTCAGKLVSG+VDQSD SFLDD+Q+EAGY+LTC+ YP S+
Sbjct:   39 PFSCRAGACSTCAGKLVSGTVDQSDQSFLDDDQIEAGYVLTCVAYPTSD 87          

HSP 2 Score: 54.299 bits (129), Expect = 2.654e-24
Identity = 25/44 (56.82%), Postives = 32/44 (72.73%), Query Frame = 3
Query:  237 MAVYKIKLIGP-KGEEHEFEAQEDQYILDATEEAGVDLPYSCRA 365
            MA +K+ LI   +G +HE E  +D+YILDA EE G DLP+SCRA
Sbjct:    1 MATFKVTLINEAEGTKHEIEVPDDEYILDAAEEEGYDLPFSCRA 44          
BLAST of EY710424 vs. ExPASy Swiss-Prot
Match: FER1_ANASP (Ferredoxin-1 OS=Anabaena sp. (strain PCC 7120) GN=petF PE=1 SV=2)

HSP 1 Score: 79.7221 bits (195), Expect = 2.654e-24
Identity = 35/49 (71.43%), Postives = 41/49 (83.67%), Query Frame = 1
Query:  349 PIPAALGACSTCAGKLVSGSVDQSDGSFLDDNQLEAGYLLTCITYPNSN 495
            P     GACSTCAGKLVSG+VDQSD SFLDD+Q+EAGY+LTC+ YP S+
Sbjct:   39 PFSCRAGACSTCAGKLVSGTVDQSDQSFLDDDQIEAGYVLTCVAYPTSD 87          

HSP 2 Score: 54.299 bits (129), Expect = 2.654e-24
Identity = 25/44 (56.82%), Postives = 32/44 (72.73%), Query Frame = 3
Query:  237 MAVYKIKLIGP-KGEEHEFEAQEDQYILDATEEAGVDLPYSCRA 365
            MA +K+ LI   +G +HE E  +D+YILDA EE G DLP+SCRA
Sbjct:    1 MATFKVTLINEAEGTKHEIEVPDDEYILDAAEEQGYDLPFSCRA 44          
The following BLAST results are available for this feature:
BLAST of EY710424 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 106
Match NameE-valueIdentityDescription
FER3_ARATH9.073e-3957.00Ferredoxin-3, chloroplastic OS=Arabidopsis thalian... [more]
FER3_MAIZE5.604e-3551.55Ferredoxin-3, chloroplastic OS=Zea mays GN=FDX3 PE... [more]
FER2_RAPSA2.594e-2883.33Ferredoxin, root R-B2 OS=Raphanus sativus PE=1 SV=... [more]
FER1_RAPSA7.456e-2878.57Ferredoxin, root R-B1 OS=Raphanus sativus PE=1 SV=... [more]
FER6_MAIZE1.087e-2559.18Ferredoxin-6, chloroplastic OS=Zea mays GN=FDX6 PE... [more]
FER1_ARATH4.072e-2561.22Ferredoxin-1, chloroplastic OS=Arabidopsis thalian... [more]
FER1_PEA8.978e-2563.27Ferredoxin-1, chloroplastic OS=Pisum sativum GN=PE... [more]
FER_SYNY42.039e-2467.35Ferredoxin OS=Synechocystis sp. (strain PCC 6714) ... [more]
FER_NOSMU2.654e-2471.43Ferredoxin OS=Nostoc muscorum PE=1 SV=2[more]
FER1_ANASP2.654e-2471.43Ferredoxin-1 OS=Anabaena sp. (strain PCC 7120) GN=... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-701-115-A09-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY710424 ID=EY710424; Name=EY710424; organism=Citrus sinensis; type=EST; length=1026bp
ATTTCACTTGACCGCCACCCATTAACCCACTCGCCACCTCGCGCGCTCCG
CCGCTCGATCTCTTGCTTTTCTGGGTAAAGATGTCGACTGTGACACTTAG
CGCCCCGTGCATGGTTAAAGCTGCACCCAGAAATCAACTATCAAGGAACT
TAATCAAGAGCCCAACCTCACTTGGATCTGTTAAGGGCATCTCCTAGACC
TTTGGCCTGAAATGCTCTCCCAATTTCCAAGCATCAATGGCTGTCTACAA
GATTAAGCTGATTGGACCTAAGGGTGAAGAGCATGAGTTTGAGGCCCAAG
AAGACCAGTACATCCTCGATGCAACTGAGGAAGCAGGAGTCGACCTGCCC
TATTCCTGCCGCGCTTGGTGCTTGCTCGACGTGTGCTGGGAAATTGGTGT
CTGGTTCAGTTGACCAGTCAGATGGTTCCTTCCTCGATGACAATCAATTG
GAGGCTGGTTATCTGCTGACTTGCATTACATACCCAAATTCAAATTGGAG
TGATTCTTTCTCAAAAGGAATAAGAGCTTTGCTTAATGCCTTTGCTGACA
ATTGGTTTTAAGGTATTTCAAATATAAATCGGGGATTCAGTGCCTTAATA
AGGTTAATAAGGTTTTCACTGGGGCCTTAAATATTTTTTTAAAATTCAAC
CTTTGTATCAGGGGGCAAGGAAATCAGTAAATTTTTTCATTTATATAAAC
AAATAACAGAGCATTTTGGGAATTTAAAAAAATAAAATAAAAGGGGCAGC
CCCTACCTATGAGGAATACCCAGCTATAAATAAAACATAGGCTAGAGGAT
AGAACTGTAGTCTCCTTTGATAGGGGTGTTCAATAAAAAAATTGAAATCT
AGTGGGTGTCATTGGTTTTTTTTAGAAATGTGTTGGGAGATGGTGGGAAA
ACAACCATCAGTATTGTTACCCTCAACATTTTTAATTTTCCCCTTATATC
TAGAATAAACTCCTCTCAACTCTTTTTTCACCTACTTATTGTAGGGTGAT
AATATTAAGTTAAATTAAGAAAAAGA
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