EY685259

Overview
NameEY685259
Unique NameEY685259
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length919
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY685259 vs. ExPASy Swiss-Prot
Match: CAF1G_ARATH (Probable CCR4-associated factor 1 homolog 7 OS=Arabidopsis thaliana GN=CAF1-7 PE=2 SV=2)

HSP 1 Score: 313.538 bits (802), Expect = 1.052e-84
Identity = 143/181 (79.01%), Postives = 164/181 (90.61%), Query Frame = 3
Query:    6 DKYCVWQFNFREFDVNEDIFANDSIELLKQSGINFTKNNEIGIDAMRFGEFMMSSGIVLSDSIHWVTFHSGYDFGYLLKLLTCQNLPDTQVEFFNLIRIYFPTVYDIKHLMKFCNSLHGGLNKLAELLEVERVGICHQAGSDSLLTASTFRKLKENFFSSSLEKYAGVLYGLGVENGQNIH 548
            +KYC+WQFNFREFD+  DI+A DSIELL+QSGI+F KNNE GID+ RF E +MSSGIVL++++HWVTFHSGYDFGYLLKLLTCQNLP+TQ  FF +I +YFP VYDIKHLMKFCNSLHGGLNKLAELL+VERVGICHQAGSDSLLT+ TFRKL+ENFF  S+EKY+GVLYGLGVENGQ +H
Sbjct:   95 NKYCIWQFNFREFDLESDIYATDSIELLRQSGIDFVKNNEFGIDSKRFAELLMSSGIVLNENVHWVTFHSGYDFGYLLKLLTCQNLPETQTGFFEMISVYFPRVYDIKHLMKFCNSLHGGLNKLAELLDVERVGICHQAGSDSLLTSCTFRKLQENFFIGSMEKYSGVLYGLGVENGQIVH 275          
BLAST of EY685259 vs. ExPASy Swiss-Prot
Match: CAF1F_ARATH (Probable CCR4-associated factor 1 homolog 6 OS=Arabidopsis thaliana GN=CAF1-6 PE=2 SV=1)

HSP 1 Score: 311.612 bits (797), Expect = 3.999e-84
Identity = 146/179 (81.56%), Postives = 161/179 (89.94%), Query Frame = 3
Query:    3 TDKYCVWQFNFREFDVNEDIFANDSIELLKQSGINFTKNNEIGIDAMRFGEFMMSSGIVLSDSIHWVTFHSGYDFGYLLKLLTCQNLPDTQVEFFNLIRIYFPTVYDIKHLMKFCNSLHGGLNKLAELLEVERVGICHQAGSDSLLTASTFRKLKENFFSSSLEKYAGVLYGLGVENGQ 539
            TDKYC+WQFNFREFD++ DIFA DSIELLKQSGI+  KN   GID+ RF E +MSSGIVL++++HWVTFHSGYDFGYLLKLLTCQNLPD+Q +FF LI +YFPTVYDIKHLMKFCNSLHGGLNKLAELLEVERVGICHQAGSDSLLT+ TFRKLKENFF   L KY+GVLYGLGVENGQ
Sbjct:   93 TDKYCIWQFNFREFDLDSDIFALDSIELLKQSGIDLAKNTLDGIDSKRFAELLMSSGIVLNENVHWVTFHSGYDFGYLLKLLTCQNLPDSQTDFFKLINVYFPTVYDIKHLMKFCNSLHGGLNKLAELLEVERVGICHQAGSDSLLTSCTFRKLKENFFVGPLHKYSGVLYGLGVENGQ 271          
BLAST of EY685259 vs. ExPASy Swiss-Prot
Match: CAF1J_ARATH (Probable CCR4-associated factor 1 homolog 10 OS=Arabidopsis thaliana GN=CAF1-10 PE=2 SV=1)

HSP 1 Score: 280.411 bits (716), Expect = 9.873e-75
Identity = 130/178 (73.03%), Postives = 152/178 (85.39%), Query Frame = 3
Query:    3 TDKYCVWQFNFREFDVNEDIFANDSIELLKQSGINFTKNNEIGIDAMRFGEFMMSSGIVLSDSIHWVTFHSGYDFGYLLKLLTCQNLPDTQVEFFNLIRIYFPTVYDIKHLMKFCNSLHGGLNKLAELLEVERVGICHQAGSDSLLTASTFRKLKENFFSSSLEKYAGVLYGLGVENG 536
            TDK+C+WQFNFREF++ EDI+A++SIELL+Q GI+F KN E GID +RFGE MMSSGIVL+D+I WVTFH GYDFGYL+KLLTC+ LP  Q +FF L+ +YFPTVYDIKHLM FCN L GGLN+LAEL+ VERVGICHQAGSDSLLT  +FRKLKE +F  S EKY GVLYGLGVE+G
Sbjct:   93 TDKFCIWQFNFREFNIGEDIYASESIELLRQCGIDFKKNIEKGIDVVRFGELMMSSGIVLNDAISWVTFHGGYDFGYLVKLLTCKELPLKQADFFKLLYVYFPTVYDIKHLMTFCNGLFGGLNRLAELMGVERVGICHQAGSDSLLTLGSFRKLKERYFPGSTEKYTGVLYGLGVEDG 270          
BLAST of EY685259 vs. ExPASy Swiss-Prot
Match: CAF1B_ARATH (Probable CCR4-associated factor 1 homolog 2 OS=Arabidopsis thaliana GN=CAF1-2 PE=2 SV=1)

HSP 1 Score: 233.417 bits (594), Expect = 1.384e-60
Identity = 111/173 (64.16%), Postives = 138/173 (79.77%), Query Frame = 3
Query:    3 TDKYCVWQFNFREFDVNEDIFANDSIELLKQSGINFTKNNEIGIDAMRFGEFMMSSGIVLSDSIHWVTFHSGYDFGYLLKLLTCQNLPDTQVEFFNLIRIYFPTVYDIKHLMKFCNSLHGGLNKLAELLEVERVGICHQAGSDSLLTASTFRKLKENFFSSSLEKYAGVLYGL 521
            T+K C+WQFNFREF+V  D+FA DSIELL++S I+  KNNE G+DA RF E +M SG+VL+D IHWVTFH GYDFGYLLKLL+ + LP+   +FF+ +  +FP VYDIK+LM FC +L+GGL K+AELL V+RVGI HQAGSDSLLT  TF K+KE FF+ SL KY+G L+GL
Sbjct:  103 TNKQCIWQFNFREFNVISDMFALDSIELLRKSAIDLEKNNECGVDAKRFAELLMGSGVVLNDKIHWVTFHCGYDFGYLLKLLSGKELPEEISDFFDQMEKFFPVVYDIKYLMGFCTNLYGGLEKIAELLGVKRVGISHQAGSDSLLTLRTFIKMKEFFFTGSLLKYSGFLFGL 275          
BLAST of EY685259 vs. ExPASy Swiss-Prot
Match: CNOT7_DANRE (CCR4-NOT transcription complex subunit 7 OS=Danio rerio GN=cnot7 PE=2 SV=1)

HSP 1 Score: 203.756 bits (517), Expect = 1.174e-51
Identity = 97/179 (54.19%), Postives = 133/179 (74.30%), Query Frame = 3
Query:   21 WQFNFREFDVNEDIFANDSIELLKQSGINFTKNNEIGIDAMRFGEFMMSSGIVLSDSIHWVTFHSGYDFGYLLKLLTCQNLPDTQVEFFNLIRIYFPTVYDIKHLMKFCNSLHGGLNKLAELLEVERVGICHQAGSDSLLTASTFRKLKENFFSSSLE--KYAGVLYGLG-----VENG 536
            WQFNF+ F++ ED++A DSIELL  SGI F K+ E GI+ M F E +M+SG+VL + + W++FHSGYDFGYL+K+L+   LPD +V+FF ++R++FP +YD+K+LMK C +L GGL ++AE LE+ER+G  HQAGSDSLLT   F K++E FF   ++  KY G LYGLG     V+NG
Sbjct:   95 WQFNFK-FNLTEDMYAQDSIELLTSSGIQFKKHEEEGIETMYFAELLMTSGVVLCEGVKWLSFHSGYDFGYLIKILSNSKLPDEEVDFFEILRLFFPIIYDVKYLMKSCKNLKGGLQEVAEQLELERIGPQHQAGSDSLLTGMAFFKMREMFFEDHIDDAKYCGHLYGLGSGSSYVQNG 272          
BLAST of EY685259 vs. ExPASy Swiss-Prot
Match: CNOT7_MOUSE (CCR4-NOT transcription complex subunit 7 OS=Mus musculus GN=Cnot7 PE=1 SV=1)

HSP 1 Score: 202.986 bits (515), Expect = 2.003e-51
Identity = 96/179 (53.63%), Postives = 133/179 (74.30%), Query Frame = 3
Query:   21 WQFNFREFDVNEDIFANDSIELLKQSGINFTKNNEIGIDAMRFGEFMMSSGIVLSDSIHWVTFHSGYDFGYLLKLLTCQNLPDTQVEFFNLIRIYFPTVYDIKHLMKFCNSLHGGLNKLAELLEVERVGICHQAGSDSLLTASTFRKLKENFFSSSLE--KYAGVLYGLG-----VENG 536
            WQFNF+ F++ ED++A DSIELL  SGI F K+ E GI+   F E +M+SG+VL + + W++FHSGYDFGYL+K+LT  NLP+ +++FF ++R++FP +YD+K+LMK C +L GGL ++AE LE+ER+G  HQAGSDSLLT   F K++E FF   ++  KY G LYGLG     V+NG
Sbjct:   95 WQFNFK-FNLTEDMYAQDSIELLTTSGIQFKKHEEEGIETQYFAELLMTSGVVLCEGVKWLSFHSGYDFGYLIKILTNSNLPEEELDFFEILRLFFPVIYDVKYLMKSCKNLKGGLQEVAEQLELERIGPQHQAGSDSLLTGMAFFKMREMFFEDHIDDAKYCGHLYGLGSGSSYVQNG 272          
BLAST of EY685259 vs. ExPASy Swiss-Prot
Match: CNOT7_HUMAN (CCR4-NOT transcription complex subunit 7 OS=Homo sapiens GN=CNOT7 PE=1 SV=3)

HSP 1 Score: 202.986 bits (515), Expect = 2.003e-51
Identity = 96/179 (53.63%), Postives = 133/179 (74.30%), Query Frame = 3
Query:   21 WQFNFREFDVNEDIFANDSIELLKQSGINFTKNNEIGIDAMRFGEFMMSSGIVLSDSIHWVTFHSGYDFGYLLKLLTCQNLPDTQVEFFNLIRIYFPTVYDIKHLMKFCNSLHGGLNKLAELLEVERVGICHQAGSDSLLTASTFRKLKENFFSSSLE--KYAGVLYGLG-----VENG 536
            WQFNF+ F++ ED++A DSIELL  SGI F K+ E GI+   F E +M+SG+VL + + W++FHSGYDFGYL+K+LT  NLP+ +++FF ++R++FP +YD+K+LMK C +L GGL ++AE LE+ER+G  HQAGSDSLLT   F K++E FF   ++  KY G LYGLG     V+NG
Sbjct:   95 WQFNFK-FNLTEDMYAQDSIELLTTSGIQFKKHEEEGIETQYFAELLMTSGVVLCEGVKWLSFHSGYDFGYLIKILTNSNLPEEELDFFEILRLFFPVIYDVKYLMKSCKNLKGGLQEVAEQLELERIGPQHQAGSDSLLTGMAFFKMREMFFEDHIDDAKYCGHLYGLGSGSSYVQNG 272          
BLAST of EY685259 vs. ExPASy Swiss-Prot
Match: CNOT7_CHICK (CCR4-NOT transcription complex subunit 7 OS=Gallus gallus GN=CNOT7 PE=2 SV=1)

HSP 1 Score: 202.986 bits (515), Expect = 2.003e-51
Identity = 96/179 (53.63%), Postives = 133/179 (74.30%), Query Frame = 3
Query:   21 WQFNFREFDVNEDIFANDSIELLKQSGINFTKNNEIGIDAMRFGEFMMSSGIVLSDSIHWVTFHSGYDFGYLLKLLTCQNLPDTQVEFFNLIRIYFPTVYDIKHLMKFCNSLHGGLNKLAELLEVERVGICHQAGSDSLLTASTFRKLKENFFSSSLE--KYAGVLYGLG-----VENG 536
            WQFNF+ F++ ED++A DSIELL  SGI F K+ E GI+   F E +M+SG+VL + + W++FHSGYDFGYL+K+LT  NLP+ +++FF ++R++FP +YD+K+LMK C +L GGL ++AE LE+ER+G  HQAGSDSLLT   F K++E FF   ++  KY G LYGLG     V+NG
Sbjct:   95 WQFNFK-FNLTEDMYAQDSIELLTTSGIQFKKHEEEGIETQYFAELLMTSGVVLCEGVKWLSFHSGYDFGYLIKILTNSNLPEEELDFFEILRLFFPVIYDVKYLMKSCKNLKGGLQEVAEQLELERIGPQHQAGSDSLLTGMAFFKMREMFFEDHIDDAKYCGHLYGLGSGSSYVQNG 272          
BLAST of EY685259 vs. ExPASy Swiss-Prot
Match: CNOT7_BOVIN (CCR4-NOT transcription complex subunit 7 OS=Bos taurus GN=CNOT7 PE=2 SV=1)

HSP 1 Score: 202.986 bits (515), Expect = 2.003e-51
Identity = 96/179 (53.63%), Postives = 133/179 (74.30%), Query Frame = 3
Query:   21 WQFNFREFDVNEDIFANDSIELLKQSGINFTKNNEIGIDAMRFGEFMMSSGIVLSDSIHWVTFHSGYDFGYLLKLLTCQNLPDTQVEFFNLIRIYFPTVYDIKHLMKFCNSLHGGLNKLAELLEVERVGICHQAGSDSLLTASTFRKLKENFFSSSLE--KYAGVLYGLG-----VENG 536
            WQFNF+ F++ ED++A DSIELL  SGI F K+ E GI+   F E +M+SG+VL + + W++FHSGYDFGYL+K+LT  NLP+ +++FF ++R++FP +YD+K+LMK C +L GGL ++AE LE+ER+G  HQAGSDSLLT   F K++E FF   ++  KY G LYGLG     V+NG
Sbjct:   95 WQFNFK-FNLTEDMYAQDSIELLTTSGIQFKKHEEEGIETQYFAELLMTSGVVLCEGVKWLSFHSGYDFGYLIKILTNSNLPEEELDFFEILRLFFPVIYDVKYLMKSCKNLKGGLQEVAEQLELERIGPQHQAGSDSLLTGMAFFKMREMFFEDHIDDAKYCGHLYGLGSGSSYVQNG 272          
BLAST of EY685259 vs. ExPASy Swiss-Prot
Match: CNOT7_XENLA (CCR4-NOT transcription complex subunit 7 OS=Xenopus laevis GN=cnot7 PE=2 SV=1)

HSP 1 Score: 201.83 bits (512), Expect = 4.463e-51
Identity = 96/179 (53.63%), Postives = 131/179 (73.18%), Query Frame = 3
Query:   21 WQFNFREFDVNEDIFANDSIELLKQSGINFTKNNEIGIDAMRFGEFMMSSGIVLSDSIHWVTFHSGYDFGYLLKLLTCQNLPDTQVEFFNLIRIYFPTVYDIKHLMKFCNSLHGGLNKLAELLEVERVGICHQAGSDSLLTASTFRKLKENFFSSSLE--KYAGVLYGLG-----VENG 536
            WQFNF+ F++ ED++A DSIELL  SGI F K+ E GI+   F E  M+SG+VL + + W++FHSGYDFGYL+K+LT  NLP+ + +FF ++R++FP +YD+K+LMK C +L GGL ++AE LE+ER+G  HQAGSDSLLT   F K++E FF   ++  KY G LYGLG     V+NG
Sbjct:   95 WQFNFK-FNLTEDMYAQDSIELLTSSGIQFKKHEEEGIETQYFAELFMTSGVVLCEGVKWLSFHSGYDFGYLIKILTNSNLPEVEQDFFEILRLFFPVIYDVKYLMKSCKNLKGGLQEVAEQLELERIGPQHQAGSDSLLTGMAFFKMREMFFEDHIDDAKYCGHLYGLGSGSSYVQNG 272          
The following BLAST results are available for this feature:
BLAST of EY685259 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 23
Match NameE-valueIdentityDescription
CAF1G_ARATH1.052e-8479.01Probable CCR4-associated factor 1 homolog 7 OS=Ara... [more]
CAF1F_ARATH3.999e-8481.56Probable CCR4-associated factor 1 homolog 6 OS=Ara... [more]
CAF1J_ARATH9.873e-7573.03Probable CCR4-associated factor 1 homolog 10 OS=Ar... [more]
CAF1B_ARATH1.384e-6064.16Probable CCR4-associated factor 1 homolog 2 OS=Ara... [more]
CNOT7_DANRE1.174e-5154.19CCR4-NOT transcription complex subunit 7 OS=Danio ... [more]
CNOT7_MOUSE2.003e-5153.63CCR4-NOT transcription complex subunit 7 OS=Mus mu... [more]
CNOT7_HUMAN2.003e-5153.63CCR4-NOT transcription complex subunit 7 OS=Homo s... [more]
CNOT7_CHICK2.003e-5153.63CCR4-NOT transcription complex subunit 7 OS=Gallus... [more]
CNOT7_BOVIN2.003e-5153.63CCR4-NOT transcription complex subunit 7 OS=Bos ta... [more]
CNOT7_XENLA4.463e-5153.63CCR4-NOT transcription complex subunit 7 OS=Xenopu... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C2-003-011-G04-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY685259 ID=EY685259; Name=EY685259; organism=Citrus sinensis; type=EST; length=919bp
GGACAGATAAATATTGTGTTTGGCAATTTAATTTTCGGGAGTTCGATGTT
AATGAGGATATCTTTGCCAATGATTCGATCGAGCTTTTGAAACAAAGTGG
GATTAATTTTACAAAAAATAATGAGATAGGTATTGATGCAATGAGATTTG
GTGAGTTTATGATGTCATCTGGGATTGTTTTGAGTGATAGCATCCATTGG
GTGACATTTCATAGTGGGTATGATTTTGGGTATTTGCTAAAGCTTTTGAC
GTGCCAGAATCTGCCTGATACGCAAGTGGAGTTCTTTAATTTGATCAGAA
TTTATTTTCCGACCGTATATGATATCAAGCACTTGATGAAGTTTTGTAAT
AGCCTTCATGGAGGATTGAACAAACTTGCTGAGTTGTTGGAAGTTGAAAG
AGTTGGGATTTGTCATCAAGCAGGTTCAGATAGTTTGCTTACAGCTAGTA
CATTCCGAAAATTGAAAGAAAACTTCTTTAGCAGCTCTTTGGAAAAATAT
GCTGGTGTCTTATATGGTTTAGGCGTTGAAAATGGACAAAATATTCATTG
AAAAGAAGGGGGAAAAAAGGGAGTTTAGAAAGCTGTTTAATTTATTGTGT
GAATGTGGCCGGGGCCCTAGCCCCAAATTCATTGGATTACTTTTTGGGCA
ACTTAAATTTAATAAATTTCTCTTATACTTATTATCCCCAGGTTTTCAAC
AGAAAAAATTTGCATAGAACGCAGTCACAATACTTTTTTCCTGGTTTACA
AAAATAAATAACAAGGGCGGCCGCTTTCACAGGAACCAATAATTCCGGTC
CCCGCTGCTGCGCACACACAACGTTCTCATACCTGGCCCCACCAATTCAA
TACCCCTGCCCACGCGTTCCAACCGNGTGCATCGGGAGACAAGACCGGCC
GGAGCAGAACTGGCCGCGG
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