EY685204

Overview
NameEY685204
Unique NameEY685204
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length577
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY685204 vs. ExPASy Swiss-Prot
Match: AB6G_ARATH (ABC transporter G family member 6 OS=Arabidopsis thaliana GN=ABCG6 PE=2 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 2.111e-13
Identity = 34/63 (53.97%), Postives = 41/63 (65.08%), Query Frame = 1
Query:   16 TFKHVLGKNITGSALLDTGGKILEHSGATDISKWNCFWLTVGFGVLFRVLFYLGGVLGSKNKR 204
            T    LG  IT S  L TG  IL+  G TD++KWNC W+TV +G  FR+LFY   +LGSKNKR
Sbjct:  664 TMSKSLGMRITSSTCLTTGYDILQQQGVTDLTKWNCLWVTVAWGFFFRILFYFSLLLGSKNKR 726          
BLAST of EY685204 vs. ExPASy Swiss-Prot
Match: AB2G_ARATH (ABC transporter G family member 2 OS=Arabidopsis thaliana GN=ABCG2 PE=2 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 2.111e-13
Identity = 34/59 (57.63%), Postives = 41/59 (69.49%), Query Frame = 1
Query:   28 VLGKNITGSALLDTGGKILEHSGATDISKWNCFWLTVGFGVLFRVLFYLGGVLGSKNKR 204
            VLG N+T    + TG  IL+  G TDISKWNC W+TV +G  FRVLFY   ++GSKNKR
Sbjct:  696 VLGTNVTAETCVTTGIDILKQQGITDISKWNCLWITVAWGFFFRVLFYFTLLIGSKNKR 754          
BLAST of EY685204 vs. ExPASy Swiss-Prot
Match: AB20G_ARATH (ABC transporter G family member 20 OS=Arabidopsis thaliana GN=ABCG20 PE=2 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.048e-12
Identity = 33/59 (55.93%), Postives = 41/59 (69.49%), Query Frame = 1
Query:   28 VLGKNITGSALLDTGGKILEHSGATDISKWNCFWLTVGFGVLFRVLFYLGGVLGSKNKR 204
            VLG N+T    + TG  IL+  G T+ISKWNC W+TV +G  FRVLFY   ++GSKNKR
Sbjct:  680 VLGINVTAETCVTTGIDILKQQGITEISKWNCLWITVAWGFFFRVLFYFTLLIGSKNKR 738          
BLAST of EY685204 vs. ExPASy Swiss-Prot
Match: AB16G_ARATH (ABC transporter G family member 16 OS=Arabidopsis thaliana GN=ABCG16 PE=2 SV=2)

HSP 1 Score: 73.1738 bits (178), Expect = 1.048e-12
Identity = 33/58 (56.90%), Postives = 41/58 (70.69%), Query Frame = 1
Query:   31 LGKNITGSALLDTGGKILEHSGATDISKWNCFWLTVGFGVLFRVLFYLGGVLGSKNKR 204
            +G  I+ S  L TG  +L+  G T +SKWNC  +TVGFG LFR+LFYL  +LGSKNKR
Sbjct:  678 IGMRISSSTCLTTGADVLKQQGVTQLSKWNCLLITVGFGFLFRILFYLCLLLGSKNKR 735          
BLAST of EY685204 vs. ExPASy Swiss-Prot
Match: AB18G_ARATH (ABC transporter G family member 18 OS=Arabidopsis thaliana GN=ABCG18 PE=2 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 1.513e-11
Identity = 31/65 (47.69%), Postives = 42/65 (64.62%), Query Frame = 1
Query:   10 VNTFKHVLGKNITGSALLDTGGKILEHSGATDISKWNCFWLTVGFGVLFRVLFYLGGVLGSKNKR 204
            ++T    LG  IT S  L TG  +L   G T +SKW+C W+T+ +G+ FR+LFYL  + GSKNKR
Sbjct:  643 LDTLSGSLGTKITESTCLRTGPDLLMQQGITQLSKWDCLWITLAWGLFFRILFYLSLLFGSKNKR 707          
BLAST of EY685204 vs. ExPASy Swiss-Prot
Match: AB1G_ARATH (ABC transporter G family member 1 OS=Arabidopsis thaliana GN=ABCG1 PE=2 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 5.749e-11
Identity = 31/65 (47.69%), Postives = 39/65 (60.00%), Query Frame = 1
Query:   10 VNTFKHVLGKNITGSALLDTGGKILEHSGATDISKWNCFWLTVGFGVLFRVLFYLGGVLGSKNKR 204
            + T    LG  I+ +  L TG  IL   G   +SKWNC ++TV FG  FR+LFY   +LGSKNKR
Sbjct:  675 LGTVSKSLGVTISSTTCLTTGSDILRQQGVVQLSKWNCLFITVAFGFFFRILFYFTLLLGSKNKR 739          
The following BLAST results are available for this feature:
BLAST of EY685204 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 6
Match NameE-valueIdentityDescription
AB6G_ARATH2.111e-1353.97ABC transporter G family member 6 OS=Arabidopsis t... [more]
AB2G_ARATH2.111e-1357.63ABC transporter G family member 2 OS=Arabidopsis t... [more]
AB20G_ARATH1.048e-1255.93ABC transporter G family member 20 OS=Arabidopsis ... [more]
AB16G_ARATH1.048e-1256.90ABC transporter G family member 16 OS=Arabidopsis ... [more]
AB18G_ARATH1.513e-1147.69ABC transporter G family member 18 OS=Arabidopsis ... [more]
AB1G_ARATH5.749e-1147.69ABC transporter G family member 1 OS=Arabidopsis t... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C2-003-011-A11-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY685204 ID=EY685204; Name=EY685204; organism=Citrus sinensis; type=EST; length=577bp
AGATAAGCTGTTAACACCTTTAAACACGTGTTGGGCAAAAACATTACTGG
CTCGGCCCTTTTGGACACTGGGGGTAAAATTCTAGAACACAGTGGAGCAA
CAGATATCAGTAAATGGAACTGCTTTTGGCTTACCGTTGGGTTTGGGGTC
CTCTTTAGGGTTCTGTTTTACTTGGGGGGGGTGCTTGGCAGCAAGAATAA
GAGAATGTAAATGATAATAATTTTGCTATTTATTTTCCTTTTTGCAACTT
GTAATACCTAAAACCGTCAGTCTTTCTTTGTCTTTGACTTTATATGGCAA
TAAAGAAATTGACCAAATGATTGCCAAGGGTCTGGGCTGGGCCGGGCTGG
GCTTTGGTCTAGGTTTTCCTTGAGCGTGGGAGTGATGAGCATTATTCACA
GTTCACTGGTGCACATACACATTGTATTCTTAGGAATTCCATAAAGGATG
CATTTGGTGGCCCGCATTGTATTGAGTTGTATCAAATTATAATGAATTGA
TAATACCAGTAATTGTATCCAAATTATAATAAATTAATAAATATTTGGAT
GGGCAAATAAAAAAAAAAAAAAAGGGG
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