EY710401

Overview
NameEY710401
Unique NameEY710401
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1013
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY710401 vs. ExPASy Swiss-Prot
Match: CSLD3_ARATH (Cellulose synthase-like protein D3 OS=Arabidopsis thaliana GN=CSLD3 PE=1 SV=1)

HSP 1 Score: 358.992 bits (920), Expect = 2.509e-98
Identity = 174/202 (86.14%), Postives = 180/202 (89.11%), Query Frame = 1
Query:    7 IALYGFDPPRAKEHHPGCCSCCFGRHKKHSSVTNTPEENRALRMG--DSDDEEMNLSLFPKKFGNSTFLVDSIPVAEFQGRPLADHPSVKNGRPPGALTIPRELLDASTVAEAISVISCWYEDKTEWGQRIGWIYGSVTEDVVTGYRMHNRGWKSVYCVTKRDAFRGTAPINLTDGLHQVLRWATGSVEIFFLPHIALLCQP 606
            IALYGFDPPRAKEHHPG CSCCF R KK S V   PEENR+LRMG    DDEEMNLSL PKKFGNSTFL+DSIPVAEFQGRPLADHP+V+NGRPPGALTIPRELLDASTVAEAI+VISCWYEDKTEWG RIGWIYGSVTEDVVTGYRMHNRGWKSVYCVTKRDAFRGTAPINLTD LHQVLRWATGSVEIFF  + A    P
Sbjct:  711 IALYGFDPPRAKEHHPGFCSCCFSRKKKKSRV---PEENRSLRMGGDSDDDEEMNLSLVPKKFGNSTFLIDSIPVAEFQGRPLADHPAVQNGRPPGALTIPRELLDASTVAEAIAVISCWYEDKTEWGSRIGWIYGSVTEDVVTGYRMHNRGWKSVYCVTKRDAFRGTAPINLTDRLHQVLRWATGSVEIFFSRNNAFFASP 909          
BLAST of EY710401 vs. ExPASy Swiss-Prot
Match: CSLD2_ARATH (Cellulose synthase-like protein D2 OS=Arabidopsis thaliana GN=CSLD2 PE=2 SV=1)

HSP 1 Score: 350.903 bits (899), Expect = 6.834e-96
Identity = 170/197 (86.29%), Postives = 177/197 (89.85%), Query Frame = 1
Query:    7 IALYGFDPPRAKEHHPGCCSCCFGRHKKHSSVTNTPEENRALRMGDSDDEEMNLSLFPKKFGNSTFLVDSIPVAEFQGRPLADHPSVKNGRPPGALTIPRELLDASTVAEAISVISCWYEDKTEWGQRIGWIYGSVTEDVVTGYRMHNRGWKSVYCVTKRDAFRGTAPINLTDGLHQVLRWATGSVEIFFLPHIALL 597
            IALYGF+PPR+K+  P C SCCF R KK     N PEENRALRM D DDEEMNLSL PKKFGNSTFL+DSIPVAEFQGRPLADHP+VKNGRPPGALTIPRELLDASTVAEAI+VISCWYEDKTEWG RIGWIYGSVTEDVVTGYRMHNRGWKSVYCVTKRDAFRGTAPINLTD LHQVLRWATGSVEIFF  + ALL
Sbjct:  714 IALYGFNPPRSKDFSPSCWSCCFPRSKKK----NIPEENRALRMSDYDDEEMNLSLVPKKFGNSTFLIDSIPVAEFQGRPLADHPAVKNGRPPGALTIPRELLDASTVAEAIAVISCWYEDKTEWGSRIGWIYGSVTEDVVTGYRMHNRGWKSVYCVTKRDAFRGTAPINLTDRLHQVLRWATGSVEIFFSRNNALL 906          
BLAST of EY710401 vs. ExPASy Swiss-Prot
Match: CSLD2_ORYSJ (Cellulose synthase-like protein D2 OS=Oryza sativa subsp. japonica GN=CSLD2 PE=2 SV=1)

HSP 1 Score: 347.051 bits (889), Expect = 9.868e-95
Identity = 164/197 (83.25%), Postives = 177/197 (89.85%), Query Frame = 1
Query:    7 IALYGFDPPRAKEHHPGCCSCCFGRHKKHSSVTNTPEENRALRMGDSDDEEMNLSLFPKKFGNSTFLVDSIPVAEFQGRPLADHPSVKNGRPPGALTIPRELLDASTVAEAISVISCWYEDKTEWGQRIGWIYGSVTEDVVTGYRMHNRGWKSVYCVTKRDAFRGTAPINLTDGLHQVLRWATGSVEIFFLPHIALL 597
            IALYGFDPPR+KEH  GCCSCCF + +K  + T   EE +ALRM D DDEEMN+S FPKKFGNS FL++SIP+AEFQGRPLADHP VKNGRPPGALT+PR+LLDASTVAEAISVISCWYEDKTEWGQR+GWIYGSVTEDVVTGYRMHNRGWKSVYCVTKRDAFRGTAPINLTD LHQVLRWATGSVEIFF  + ALL
Sbjct:  736 IALYGFDPPRSKEHS-GCCSCCFPQRRKVKTSTVASEERQALRMADFDDEEMNMSQFPKKFGNSNFLINSIPIAEFQGRPLADHPGVKNGRPPGALTVPRDLLDASTVAEAISVISCWYEDKTEWGQRVGWIYGSVTEDVVTGYRMHNRGWKSVYCVTKRDAFRGTAPINLTDRLHQVLRWATGSVEIFFSRNNALL 931          
BLAST of EY710401 vs. ExPASy Swiss-Prot
Match: CSLD2_ORYSI (Cellulose synthase-like protein D2 OS=Oryza sativa subsp. indica GN=CSLD2 PE=3 SV=1)

HSP 1 Score: 347.051 bits (889), Expect = 9.868e-95
Identity = 164/197 (83.25%), Postives = 177/197 (89.85%), Query Frame = 1
Query:    7 IALYGFDPPRAKEHHPGCCSCCFGRHKKHSSVTNTPEENRALRMGDSDDEEMNLSLFPKKFGNSTFLVDSIPVAEFQGRPLADHPSVKNGRPPGALTIPRELLDASTVAEAISVISCWYEDKTEWGQRIGWIYGSVTEDVVTGYRMHNRGWKSVYCVTKRDAFRGTAPINLTDGLHQVLRWATGSVEIFFLPHIALL 597
            IALYGFDPPR+KEH  GCCSCCF + +K  + T   EE +ALRM D DDEEMN+S FPKKFGNS FL++SIP+AEFQGRPLADHP VKNGRPPGALT+PR+LLDASTVAEAISVISCWYEDKTEWGQR+GWIYGSVTEDVVTGYRMHNRGWKSVYCVTKRDAFRGTAPINLTD LHQVLRWATGSVEIFF  + ALL
Sbjct:  736 IALYGFDPPRSKEHS-GCCSCCFPQRRKVKTSTVASEERQALRMADFDDEEMNMSQFPKKFGNSNFLINSIPIAEFQGRPLADHPGVKNGRPPGALTVPRDLLDASTVAEAISVISCWYEDKTEWGQRVGWIYGSVTEDVVTGYRMHNRGWKSVYCVTKRDAFRGTAPINLTDRLHQVLRWATGSVEIFFSRNNALL 931          
BLAST of EY710401 vs. ExPASy Swiss-Prot
Match: CSLD1_ORYSJ (Cellulose synthase-like protein D1 OS=Oryza sativa subsp. japonica GN=CSLD1 PE=2 SV=1)

HSP 1 Score: 303.523 bits (776), Expect = 2.578e-82
Identity = 152/199 (76.38%), Postives = 164/199 (82.41%), Query Frame = 1
Query:    7 IALYGFDPPRAKEHHPGCCSCCFGRHKKHSSVTNTPEENR---ALRMGDSDDEEMNLSLFPKKFGNSTFLVDSIPVAEFQGRPLADHPSVKNGRPPGALTIPRELLDASTVAEAISVISCWYEDKTEWGQRIGWIYGSVTEDVVTGYRMHNRGWKSVYCVTKRDAFRGTAPINLTDGLHQVLRWATGSVEIFFLPHIAL 594
            IALYGFDPPR+K+H     SCC  R ++  S     EE     ALRM    D  MN++ FPKKFGNS+FL+DSIPVAEFQGRPLADHPSVKNGRPPGALTIPRE LDAS VAEAISV+SCWYE+KTEWG R+GWIYGSVTEDVVTGYRMHNRGWKSVYCVT RDAFRGTAPINLTD LHQVLRWATGSVEIFF  + AL
Sbjct:  690 IALYGFDPPRSKDHTTPW-SCCLPRRRRTRSQPQPQEEEEETMALRM--DMDGAMNMASFPKKFGNSSFLIDSIPVAEFQGRPLADHPSVKNGRPPGALTIPRETLDASIVAEAISVVSCWYEEKTEWGTRVGWIYGSVTEDVVTGYRMHNRGWKSVYCVTHRDAFRGTAPINLTDRLHQVLRWATGSVEIFFSRNNAL 885          

HSP 2 Score: 24.6386 bits (52), Expect = 2.578e-82
Identity = 14/22 (63.64%), Postives = 16/22 (72.73%), Query Frame = 2
Query:  572 FFSRTLPSFASPKMEIGLQRIA 637
            FFSR    FAS KM++ LQRIA
Sbjct:  878 FFSRNNALFASSKMKV-LQRIA 898          
BLAST of EY710401 vs. ExPASy Swiss-Prot
Match: CSLD1_ORYSI (Cellulose synthase-like protein D1 OS=Oryza sativa subsp. indica GN=CSLD1 PE=2 SV=2)

HSP 1 Score: 303.523 bits (776), Expect = 2.578e-82
Identity = 152/199 (76.38%), Postives = 164/199 (82.41%), Query Frame = 1
Query:    7 IALYGFDPPRAKEHHPGCCSCCFGRHKKHSSVTNTPEENR---ALRMGDSDDEEMNLSLFPKKFGNSTFLVDSIPVAEFQGRPLADHPSVKNGRPPGALTIPRELLDASTVAEAISVISCWYEDKTEWGQRIGWIYGSVTEDVVTGYRMHNRGWKSVYCVTKRDAFRGTAPINLTDGLHQVLRWATGSVEIFFLPHIAL 594
            IALYGFDPPR+K+H     SCC  R ++  S     EE     ALRM    D  MN++ FPKKFGNS+FL+DSIPVAEFQGRPLADHPSVKNGRPPGALTIPRE LDAS VAEAISV+SCWYE+KTEWG R+GWIYGSVTEDVVTGYRMHNRGWKSVYCVT RDAFRGTAPINLTD LHQVLRWATGSVEIFF  + AL
Sbjct:  690 IALYGFDPPRSKDHTTPW-SCCLPRRRRTRSQPQPQEEEEETMALRM--DMDGAMNMASFPKKFGNSSFLIDSIPVAEFQGRPLADHPSVKNGRPPGALTIPRETLDASIVAEAISVVSCWYEEKTEWGTRVGWIYGSVTEDVVTGYRMHNRGWKSVYCVTHRDAFRGTAPINLTDRLHQVLRWATGSVEIFFSRNNAL 885          

HSP 2 Score: 24.6386 bits (52), Expect = 2.578e-82
Identity = 14/22 (63.64%), Postives = 16/22 (72.73%), Query Frame = 2
Query:  572 FFSRTLPSFASPKMEIGLQRIA 637
            FFSR    FAS KM++ LQRIA
Sbjct:  878 FFSRNNALFASSKMKV-LQRIA 898          
BLAST of EY710401 vs. ExPASy Swiss-Prot
Match: CSLD1_ARATH (Cellulose synthase-like protein D1 OS=Arabidopsis thaliana GN=CSLD1 PE=2 SV=1)

HSP 1 Score: 267.314 bits (682), Expect = 9.937e-71
Identity = 136/204 (66.67%), Postives = 154/204 (75.49%), Query Frame = 1
Query:   10 ALYGFDPPRAKEHHPGCCSCCFGRHK---------KHSSVTNTPEENRALRMGDSDDEEMNLSLFPKKFGNSTFLVDSIPVAEFQGRPLADHPSVKNGRPPGALTIPRELLDASTVAEAISVISCWYEDKTEWGQRIGWIYGSVTEDVVTGYRMHNRGWKSVYCVTKRDAFRGTAPINLTDGLHQVLRWATGSVEIFFLPHIAL 594
            ALYGF+PPRA E+     S  FG+ K           +S T+   +  +     +DD ++ L   PKKFGNST   D+IPVAE+QGRPLADH SVKNGRPPGAL +PR  LDA TVAEAI+VISCWYED TEWG RIGWIYGSVTEDVVTGYRMHNRGW+SVYC+TKRDAFRGTAPINLTD LHQVLRWATGSVEIFF  + A+
Sbjct:  603 ALYGFNPPRANEY-----SGVFGQEKAPAMHVRTQSQASQTSQASDLESDTQPLNDDPDLGL---PKKFGNSTMFTDTIPVAEYQGRPLADHMSVKNGRPPGALLLPRPPLDAPTVAEAIAVISCWYEDNTEWGDRIGWIYGSVTEDVVTGYRMHNRGWRSVYCITKRDAFRGTAPINLTDRLHQVLRWATGSVEIFFSKNNAM 798          
BLAST of EY710401 vs. ExPASy Swiss-Prot
Match: CSLD4_ARATH (Cellulose synthase-like protein D4 OS=Arabidopsis thaliana GN=CSLD4 PE=2 SV=1)

HSP 1 Score: 264.233 bits (674), Expect = 8.412e-70
Identity = 130/196 (66.33%), Postives = 152/196 (77.55%), Query Frame = 1
Query:   10 ALYGFDPPRAKEHHPGCCSCCFGRHKKHSSVTNTPEENRALRMGDSDDEEMNLSLFPKKFGNSTFLVDSIPVAEFQGRPLADHPSVKNGRPPGALTIPRELLDASTVAEAISVISCWYEDKTEWGQRIGWIYGSVTEDVVTGYRMHNRGWKSVYCVTKRDAFRGTAPINLTDGLHQVLRWATGSVEIFFLPHIALL 597
            ALYGFDPP   +             KK S       E  AL   D D + ++++  PK+FGNST L +SIP+AEFQGRPLADHP+VK GRPPGAL +PR+ LDA+TVAE++SVISCWYEDKTEWG R+GWIYGSVTEDVVTGYRMHNRGW+SVYC+TKRD+FRG+APINLTD LHQVLRWATGSVEIFF  + A+L
Sbjct:  690 ALYGFDPPNPDKL----------LEKKES-------ETEALTTSDFDPD-LDVTQLPKRFGNSTLLAESIPIAEFQGRPLADHPAVKYGRPPGALRVPRDPLDATTVAESVSVISCWYEDKTEWGDRVGWIYGSVTEDVVTGYRMHNRGWRSVYCITKRDSFRGSAPINLTDRLHQVLRWATGSVEIFFSRNNAIL 867          
BLAST of EY710401 vs. ExPASy Swiss-Prot
Match: CSLD3_ORYSJ (Cellulose synthase-like protein D3 OS=Oryza sativa subsp. japonica GN=CSLD3 PE=2 SV=2)

HSP 1 Score: 258.84 bits (660), Expect = 3.534e-68
Identity = 127/196 (64.80%), Postives = 146/196 (74.49%), Query Frame = 1
Query:   10 ALYGFDPPRAKEHHPGCCSCCFGRHKKHSSVTNTPEENRALRMGDSDDEEMNLSLFPKKFGNSTFLVDSIPVAEFQGRPLADHPSVKNGRPPGALTIPRELLDASTVAEAISVISCWYEDKTEWGQRIGWIYGSVTEDVVTGYRMHNRGWKSVYCVTKRDAFRGTAPINLTDGLHQVLRWATGSVEIFFLPHIALL 597
            A+YGFDPPR  E+     +      KK  +    PE +      +  D E+   L P++FGNS+  + SIPVAEFQ RPLADHP+V +GRP GALT+PR  LD  TVAEA+SVISCWYEDKTEWG R+GWIYGSVTEDVVTGYRMHNRGW+SVYC+TKRDAF GTAPINLTD LHQVLRWATGSVEIFF  + A L
Sbjct:  716 AVYGFDPPRTAEYTGWLFT------KKKVTTFKDPESDTQTLKAEDFDAELTSHLVPRRFGNSSPFMASIPVAEFQARPLADHPAVLHGRPSGALTVPRPPLDPPTVAEAVSVISCWYEDKTEWGDRVGWIYGSVTEDVVTGYRMHNRGWRSVYCITKRDAFLGTAPINLTDRLHQVLRWATGSVEIFFSRNNAFL 905          
BLAST of EY710401 vs. ExPASy Swiss-Prot
Match: CSLD5_ORYSJ (Cellulose synthase-like protein D5 OS=Oryza sativa subsp. japonica GN=CSLD5 PE=2 SV=1)

HSP 1 Score: 249.21 bits (635), Expect = 2.800e-65
Identity = 128/215 (59.53%), Postives = 147/215 (68.37%), Query Frame = 1
Query:   10 ALYGFDPPRAKEHH-------------------PGCCSCCFGRHKKHSSVTNTPEENRALRMGDSDDEEMNLSLFPKKFGNSTFLVDSIPVAEFQGRPLADHPSVKNGRPPGALTIPRELLDASTVAEAISVISCWYEDKTEWGQRIGWIYGSVTEDVVTGYRMHNRGWKSVYCVTKRDAFRGTAPINLTDGLHQVLRWATGSVEIFFLPHIALL 597
            A+YGF+PPRA E+                    PG      G  +          E +AL     D E       P+KFG S   ++SI VAE+QGRPL DHPSV NGRPPGAL +PR  LDA+TVAE++SVISCWYED TEWGQR+GWIYGSVTEDVVTGYRMHNRGW+SVYC+T+RDAFRGTAPINLTD LHQVLRWATGSVEIFF  + A+L
Sbjct:  572 AIYGFNPPRAIEYRGTYGQTKVPIDPRQGSEAMPGA-----GGGRSGGGSVGGDHELQALSTAHPDHEA------PQKFGKSKMFIESIAVAEYQGRPLQDHPSVLNGRPPGALLMPRPPLDAATVAESVSVISCWYEDNTEWGQRVGWIYGSVTEDVVTGYRMHNRGWRSVYCITRRDAFRGTAPINLTDRLHQVLRWATGSVEIFFSKNNAVL 775          
The following BLAST results are available for this feature:
BLAST of EY710401 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 64
Match NameE-valueIdentityDescription
CSLD3_ARATH2.509e-9886.14Cellulose synthase-like protein D3 OS=Arabidopsis ... [more]
CSLD2_ARATH6.834e-9686.29Cellulose synthase-like protein D2 OS=Arabidopsis ... [more]
CSLD2_ORYSJ9.868e-9583.25Cellulose synthase-like protein D2 OS=Oryza sativa... [more]
CSLD2_ORYSI9.868e-9583.25Cellulose synthase-like protein D2 OS=Oryza sativa... [more]
CSLD1_ORYSJ2.578e-8276.38Cellulose synthase-like protein D1 OS=Oryza sativa... [more]
CSLD1_ORYSI2.578e-8276.38Cellulose synthase-like protein D1 OS=Oryza sativa... [more]
CSLD1_ARATH9.937e-7166.67Cellulose synthase-like protein D1 OS=Arabidopsis ... [more]
CSLD4_ARATH8.412e-7066.33Cellulose synthase-like protein D4 OS=Arabidopsis ... [more]
CSLD3_ORYSJ3.534e-6864.80Cellulose synthase-like protein D3 OS=Oryza sativa... [more]
CSLD5_ORYSJ2.800e-6559.53Cellulose synthase-like protein D5 OS=Oryza sativa... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-701-107-F07-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY710401 ID=EY710401; Name=EY710401; organism=Citrus sinensis; type=EST; length=1013bp
TCCGGGATTGCCCTCTATGGATTTGATCCTCCTCGAGCAAAAGAGCACCA
CCCAGGTTGCTGCAGCTGCTGCTTTGGCCGTCACAAGAAGCATTCCTCAG
TTACAAACACCCCTGAAGAGAATAGGGCCCTAAGAATGGGTGATTCTGAT
GATGAAGAGATGAACCTTTCTTTGTTCCCTAAGAAGTTTGGTAACTCAAC
TTTCCTTGTTGATTCAATTCCAGTGGCAGAGTTCCAAGGTCGTCCCCTTG
CAGATCACCCCTCTGTGAAGAATGGACGCCCACCTGGTGCTCTTACCATA
CCTCGTGAACTTCTTGATGCATCAACTGTTGCAGAGGCTATCAGTGTCAT
CTCGTGCTGGTATGAAGACAAGACTGAATGGGGACAGCGTATAGGGTGGA
TTTATGGGTCTGTTACCGAAGATGTGGTCACTGGGTATAGAATGCACAAT
AGAGGGTGGAAATCTGTTTATTGTGTGACCAAGCGTGATGCCTTCCGTGG
AACTGCTCCGATAAATCTTACAGATGGGCTTCATCAAGTCCTACGGTGGG
CTACGGGTTCAGTTGAAATCTTTTTTCTCCCGCACATTGCCCTCCTTTGC
CAGCCCGAAAATGGAAATTGGCCTCCAAAGGATCGCAAAACCTCCAGGTT
GGGAAATCCATCCTTTTAATTTCTACCTTCCCGGAATGGTCAACGGGTTT
TCCTTCCAGCTTTTTTTCCCTCTTTCTCCCGGCCCGGTTCCATCGGTCCC
GAACCCCCTCAAGGGTAACATTTCCCTTTCCCTACCCTTCCTTAACCCAT
CCCCGGGGGAAATCCCAAAGATAAAAACAAAGCTTTTTGCGTTGGAAAAA
TAAAATGGGGGCCCGCGGGTATTTTGAAAATTTTAAAAAAAAAGGGGGGG
TGGGGAAAAAAAAAAGAAACAATAGTTTTTTTGGGGGGGTTTTAATTTTG
GGAGAGAGGCGCCACTATGGGGGGGCCACTCCACCCTGCTTTGGCGTTGG
GCAGGGGTGGGTG
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