EY710388

Overview
NameEY710388
Unique NameEY710388
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1028
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY710388 vs. ExPASy Swiss-Prot
Match: EXPA1_ARATH (Expansin-A1 OS=Arabidopsis thaliana GN=EXPA1 PE=2 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 7.590e-42
Identity = 87/150 (58.00%), Postives = 99/150 (66.00%), Query Frame = 3
Query:  108 HANG--GGGWINARATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKCVNDPKWCLPGTIMVTATXXXXXXXXXXXXXXGWCNPPQQQF*SLSACVPITLLNNRAGVVPVTLQKGTPGGKKGGIRFTINGH 551
            H NG  GGGW+NA ATFY              YGNLYSQGYGTNTAALSTALFNNGLSCG+C+EI+C ND KWCLPG+I+VTAT              GWCNPPQQ F  LS  V   +   RAG+VPV  ++  P  ++GGIRFTINGH
Sbjct:   18 HVNGYAGGGWVNAHATFYGGGDASGTMGGACGYGNLYSQGYGTNTAALSTALFNNGLSCGACFEIRCQNDGKWCLPGSIVVTATNFCPPNNALPNNAGGWCNPPQQHF-DLSQPVFQRIAQYRAGIVPVAYRR-VPCVRRGGIRFTINGH 165          
BLAST of EY710388 vs. ExPASy Swiss-Prot
Match: EXP10_ARATH (Expansin-A10 OS=Arabidopsis thaliana GN=EXPA10 PE=2 SV=1)

HSP 1 Score: 164.081 bits (414), Expect = 1.212e-39
Identity = 82/144 (56.94%), Postives = 96/144 (66.67%), Query Frame = 3
Query:  120 GGGWINARATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKCVNDPKWCLPGTIMVTATXXXXXXXXXXXXXXGWCNPPQQQF*SLSACVPITLLNNRAGVVPVTLQKGTPGGKKGGIRFTINGH 551
            GGGWINA ATFY              YGNLYSQGYGT+TAALSTALFNNGLSCGSC+EI+C ND KWCLPG+I+VTAT              GWCNPP + F  L+  V   +   RAG+VPV+ ++  P  ++GGIRFTINGH
Sbjct:   23 GGGWINAHATFYGGGDASGTMGGACGYGNLYSQGYGTSTAALSTALFNNGLSCGSCFEIRCENDGKWCLPGSIVVTATNFCPPNNALANNNGGWCNPPLEHF-DLAQPVFQRIAQYRAGIVPVSYRR-VPCRRRGGIRFTINGH 164          
BLAST of EY710388 vs. ExPASy Swiss-Prot
Match: EXPA9_ARATH (Expansin-A9 OS=Arabidopsis thaliana GN=EXPA9 PE=2 SV=1)

HSP 1 Score: 159.458 bits (402), Expect = 2.985e-38
Identity = 79/145 (54.48%), Postives = 97/145 (66.90%), Query Frame = 3
Query:  120 GGGWINARATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKCVNDPKWCLPG--TIMVTATXXXXXXXXXXXXXXGWCNPPQQQF*SLSACVPITLLNNRAGVVPVTLQKGTPGGKKGGIRFTING 548
            GG WINA ATFY              YGNLYSQGYG NTAALSTALFNNGLSCGSC+E+KC+NDP WCLPG  +I++TAT              GWCNPP++ F  L+  + +++   +AG+VPV+ ++  P  KKGGIRFTING
Sbjct:   29 GGPWINAHATFYGEADASGTMGGACGYGNLYSQGYGVNTAALSTALFNNGLSCGSCFELKCINDPGWCLPGNPSILITATNFCPPNFNQASDNGGWCNPPREHF-DLAMPMFLSIAKYKAGIVPVSYRR-IPCRKKGGIRFTING 171          
BLAST of EY710388 vs. ExPASy Swiss-Prot
Match: EXP14_ARATH (Expansin-A14 OS=Arabidopsis thaliana GN=EXPA14 PE=2 SV=1)

HSP 1 Score: 155.992 bits (393), Expect = 3.300e-37
Identity = 77/142 (54.23%), Postives = 91/142 (64.08%), Query Frame = 3
Query:  126 GWINARATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKCVNDPKWCLPGTIMVTATXXXXXXXXXXXXXXGWCNPPQQQF*SLSACVPITLLNNRAGVVPVTLQKGTPGGKKGGIRFTINGH 551
            GW+NARATFY              YGNLYSQGYGTNTAALSTALFN G SCG+C++IKCV+DPKWC+ GTI VT T              GWCNPPQ  F  L+  + + +   +AGVVPV  ++     +KGGIRFTINGH
Sbjct:   28 GWVNARATFYGGADASGTMGGACGYGNLYSQGYGTNTAALSTALFNGGQSCGACFQIKCVDDPKWCIGGTITVTGTNFCPPNFAQANNAGGWCNPPQHHF-DLAQPIFLRIAQYKAGVVPVQYRR-VACRRKGGIRFTINGH 167          
BLAST of EY710388 vs. ExPASy Swiss-Prot
Match: EXPA4_ARATH (Expansin-A4 OS=Arabidopsis thaliana GN=EXPA4 PE=1 SV=1)

HSP 1 Score: 155.606 bits (392), Expect = 4.310e-37
Identity = 77/146 (52.74%), Postives = 95/146 (65.07%), Query Frame = 3
Query:  120 GGGWINARATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKCVNDPKWCLPG--TIMVTATXXXXXXXXXXXXXXGWCNPPQQQF*SLSACVPITLLNNRAGVVPVTLQKGTPGGKKGGIRFTINGH 551
            GG W NA ATFY              YGNLYSQGYGTNTAALSTALFNNG+SCG+C+E+KC NDP+WC  G  +I++TAT              GWCNPP++ F  L+  V + +   RAG+VPV+ ++  P  K+GGIRFTINGH
Sbjct:   28 GGAWQNAHATFYGGSDASGTMGGACGYGNLYSQGYGTNTAALSTALFNNGMSCGACFELKCANDPQWCHSGSPSILITATNFCPPNLAQPSDNGGWCNPPREHF-DLAMPVFLKIAQYRAGIVPVSYRR-VPCRKRGGIRFTINGH 171          
BLAST of EY710388 vs. ExPASy Swiss-Prot
Match: EXP15_ARATH (Expansin-A15 OS=Arabidopsis thaliana GN=EXPA15 PE=2 SV=2)

HSP 1 Score: 155.606 bits (392), Expect = 4.310e-37
Identity = 79/142 (55.63%), Postives = 91/142 (64.08%), Query Frame = 3
Query:  126 GWINARATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKCVNDPKWCLPGTIMVTATXXXXXXXXXXXXXXGWCNPPQQQF*SLSACVPITLLNNRAGVVPVTLQKGTPGGKKGGIRFTINGH 551
            GW+NA ATFY              YGNLYSQGYGTNTAALSTALFNNGLSCG+C+EIKC +D  WCLPG I+VTAT              GWCNPP   F  LS  V   +   +AGVVPV+ ++  P  ++GGIRFTINGH
Sbjct:   29 GWVNAHATFYGGSDASGTMGGACGYGNLYSQGYGTNTAALSTALFNNGLSCGACFEIKCQSDGAWCLPGAIIVTATNFCPPNNALPNNAGGWCNPPLHHF-DLSQPVFQRIAQYKAGVVPVSYRR-VPCMRRGGIRFTINGH 168          
BLAST of EY710388 vs. ExPASy Swiss-Prot
Match: EXPA8_ARATH (Expansin-A8 OS=Arabidopsis thaliana GN=EXPA8 PE=2 SV=1)

HSP 1 Score: 153.68 bits (387), Expect = 1.638e-36
Identity = 77/143 (53.85%), Postives = 89/143 (62.24%), Query Frame = 3
Query:  123 GGWINARATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKCVNDPKWCLPGTIMVTATXXXXXXXXXXXXXXGWCNPPQQQF*SLSACVPITLLNNRAGVVPVTLQKGTPGGKKGGIRFTINGH 551
            GGW    ATFY              YGNLY QGYGTNTAALSTALFNNGL+CG+CYE+KC +DP+WCL  TI VTAT              GWCNPP Q F  L+    + +   RAG+VPV+ ++  P  KKGGIRFTINGH
Sbjct:   28 GGWQGGHATFYGGEDASGTMGGACGYGNLYGQGYGTNTAALSTALFNNGLTCGACYEMKCNDDPRWCLGSTITVTATNFCPPNPGLSNDNGGWCNPPLQHF-DLAEPAFLQIAQYRAGIVPVSFRR-VPCMKKGGIRFTINGH 168          
BLAST of EY710388 vs. ExPASy Swiss-Prot
Match: EXP16_ARATH (Expansin-A16 OS=Arabidopsis thaliana GN=EXPA16 PE=2 SV=1)

HSP 1 Score: 149.828 bits (377), Expect = 2.365e-35
Identity = 76/146 (52.05%), Postives = 91/146 (62.33%), Query Frame = 3
Query:  120 GGGWINARATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKCVNDPKWCLPG--TIMVTATXXXXXXXXXXXXXXGWCNPPQQQF*SLSACVPITLLNNRAGVVPVTLQKGTPGGKKGGIRFTINGH 551
            GG W  A ATFY              YGNLYSQGYGTNTAALST+LFN+G SCG+C+EIKCVNDPKWC PG  ++ VTAT              GWCNPP+  F  L+  V + +   RAG+VP++ ++     K GGIRFTINGH
Sbjct:   31 GGSWQTAHATFYGGNDASGTMGGACGYGNLYSQGYGTNTAALSTSLFNSGQSCGACFEIKCVNDPKWCHPGNPSVFVTATNFCPPNLAQPSDNGGWCNPPRSHF-DLAMPVFLKIAEYRAGIVPISYRR-VACRKSGGIRFTINGH 174          
BLAST of EY710388 vs. ExPASy Swiss-Prot
Match: EXPA3_ARATH (Expansin-A3 OS=Arabidopsis thaliana GN=EXPA3 PE=2 SV=1)

HSP 1 Score: 147.517 bits (371), Expect = 1.174e-34
Identity = 75/145 (51.72%), Postives = 93/145 (64.14%), Query Frame = 3
Query:  120 GGGWINARATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKCVNDPKWCLPG--TIMVTATXXXXXXXXXXXXXXGWCNPPQQQF*SLSACVPITLLNNRAGVVPVTLQKGTPGGKKGGIRFTING 548
            GG W NA ATFY              YGNLYSQGYG NTAALSTALFNNG SCG+C+EIKC +DP+WC+PG  +I+VTAT              GWCNPP++ F  L+  + + +   RAG+VPV+ ++  P  K GGIRFT+NG
Sbjct:   33 GGPWQNAHATFYGGSDASGTMGGACGYGNLYSQGYGVNTAALSTALFNNGFSCGACFEIKCTDDPRWCVPGNPSILVTATNFCPPNFAQPSDDGGWCNPPREHF-DLAMPMFLKIGLYRAGIVPVSYRR-VPCRKIGGIRFTVNG 175          
BLAST of EY710388 vs. ExPASy Swiss-Prot
Match: EXPA6_ARATH (Expansin-A6 OS=Arabidopsis thaliana GN=EXPA6 PE=2 SV=2)

HSP 1 Score: 146.747 bits (369), Expect = 2.002e-34
Identity = 74/145 (51.03%), Postives = 90/145 (62.07%), Query Frame = 3
Query:  120 GGGWINARATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKCVNDPKWCLPG--TIMVTATXXXXXXXXXXXXXXGWCNPPQQQF*SLSACVPITLLNNRAGVVPVTLQKGTPGGKKGGIRFTING 548
            GGGW  A ATFY              YGNLYSQGYG NTAALSTALFNNG SCG+C+E+KC +DPKWC  G  +I +TAT              GWCNPP+  F  L+  + + +   RAG+VPV+ ++  P  K+GGIRFTING
Sbjct:   28 GGGWETAHATFYGGSDASGTMGGACGYGNLYSQGYGVNTAALSTALFNNGFSCGACFELKCASDPKWCHSGSPSIFITATNFCPPNFAQPSDNGGWCNPPRPHF-DLAMPMFLKIAEYRAGIVPVSFRR-VPCRKRGGIRFTING 170          
The following BLAST results are available for this feature:
BLAST of EY710388 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 58
Match NameE-valueIdentityDescription
EXPA1_ARATH7.590e-4258.00Expansin-A1 OS=Arabidopsis thaliana GN=EXPA1 PE=2 ... [more]
EXP10_ARATH1.212e-3956.94Expansin-A10 OS=Arabidopsis thaliana GN=EXPA10 PE=... [more]
EXPA9_ARATH2.985e-3854.48Expansin-A9 OS=Arabidopsis thaliana GN=EXPA9 PE=2 ... [more]
EXP14_ARATH3.300e-3754.23Expansin-A14 OS=Arabidopsis thaliana GN=EXPA14 PE=... [more]
EXPA4_ARATH4.310e-3752.74Expansin-A4 OS=Arabidopsis thaliana GN=EXPA4 PE=1 ... [more]
EXP15_ARATH4.310e-3755.63Expansin-A15 OS=Arabidopsis thaliana GN=EXPA15 PE=... [more]
EXPA8_ARATH1.638e-3653.85Expansin-A8 OS=Arabidopsis thaliana GN=EXPA8 PE=2 ... [more]
EXP16_ARATH2.365e-3552.05Expansin-A16 OS=Arabidopsis thaliana GN=EXPA16 PE=... [more]
EXPA3_ARATH1.174e-3451.72Expansin-A3 OS=Arabidopsis thaliana GN=EXPA3 PE=2 ... [more]
EXPA6_ARATH2.002e-3451.03Expansin-A6 OS=Arabidopsis thaliana GN=EXPA6 PE=2 ... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-701-107-D09-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY710388 ID=EY710388; Name=EY710388; organism=Citrus sinensis; type=EST; length=1028bp
CCACGCGTCCGCTTTCTCTACTCTGCTTCTGGGCTTCCAATTTCTCCAAG
AAAATGTATTTTGCTGGGTTTTTCTCGTTGGGTTTCCTTGCATTGGTGTC
CTCCGTTCATGCTAATGGAGGCGGTGGGTGGATCAATGCTCGTGCCACTT
TCTATGGTGGTGGCGATGCTTCAGGGACTATGGGTGGGGCTTGTGGCTAT
GGGAATCTGTATAGCCAGGGTTATGGAACGAACACTGCAGCCTTGAGCAC
GGCTTTGTTCAACAACGGTTTGAGCTGTGGGTCTTGCTATGAGATTAAGT
GTGTTAATGACCCCAAATGGTGCTTGCCCGGCACCATTATGGTCACAGCT
ACCAATTTTTGCCCACCGAACAACGCCCTCCCCAACAATGCATGCGGTTG
GTGCAATCCTCCGCAGCAACAATTTTGATCTCTCTCAGCCTGTGTTCCAA
TAACATTGCTCAATAACAGAGCTGGAGTTGTCCCTGTAACTTTACAAAAA
GGTACCCCTGGCGGAAAAAAGGGAGGCATCAGGTTCACAATCAATGGCCA
TTTCCTAATTCAACCATAATGATGATCTCCAAACGTTGGGGGGGGCTGGG
TGAAAGTTCAGGGCTGATTTCAAATCAAAAGGGACTAAAACTGGGTGGGG
AAACCAGGGTCAAAAAAATTGGGGGGCCAAAACTTGGCAAATATATAACC
TTTTTCTCCTTGGGGCCAAAACTTGGACCTTTTTAAGGTCCAACAAACAG
AGGAGGGGGCCGCCCGTGGGACTATCAAAAAAAGTATTCCCACAAAGAAA
ACAAGGATAATATGGGATCGAAATTTTAACACGGGCTAGACCATATTTTC
CTTTATAATAACAGCAAAAAAAACACTATAAAAAAAGATTGAGGGGATTA
AATACATCATGAATTTTTAAAGCGTCCACAAAAATTATTGTAGGAGAAAG
AAAAAAAGAGAGAAGAAATAAATTAAAGGGAAAAAAAAAGTAAATTGATA
TATTTAAACCCCACATAAAAAGAAGGAG
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