EY685165

Overview
NameEY685165
Unique NameEY685165
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length906
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY685165 vs. ExPASy Swiss-Prot
Match: FB84_ARATH (F-box protein At1g70590 OS=Arabidopsis thaliana GN=At1g70590 PE=2 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 9.852e-27
Identity = 69/135 (51.11%), Postives = 87/135 (64.44%), Query Frame = 1 
Query:   13 MKQEHAPF*STGSRFTALQFPITEKDNRRP*LTXXXXXXXXXXXXXFSCSRSIKS----TEGHDFASLPFDVLNKIAASFTLPQLRAASLVCKSWNDALRPLREAMVLLKWGKRFKHGR-GVRKNLDKALDSFLK 402
            MKQ   P  S GSRF++L F      ++R  ++              S S S  S     E  DF+ LP+D+L KIAA F+ P L+AASLVCKSW DAL+PLRE+M+L++WGK++KHGR GVR NLDKALDSFLK
Sbjct:    1 MKQRTWPCRSEGSRFSSLSFLKPHDKDKRSRISSINKATAKSTTSSRSSSSSSSSRPPSNEFGDFSMLPYDILMKIAAPFSHPNLQAASLVCKSWRDALKPLRESMLLIRWGKKYKHGRGGVRANLDKALDSFLK 135
The following BLAST results are available for this feature:
BLAST of EY685165 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
FB84_ARATH9.852e-2751.11F-box protein At1g70590 OS=Arabidopsis thaliana GN... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C2-003-010-E12-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY685165 ID=EY685165; Name=EY685165; organism=Citrus sinensis; type=EST; length=906bp
CCACGCGTCCGGATGAAGCAAGAACATGCCCCTTTTTGATCGACCGGCTC
TCGGTTCACAGCTCTTCAATTCCCCATAACCGAGAAGGACAACCGCCGGC
CATAACTCACCGCCAGTGCACGGAAGGCTAGAATCAAACGGCGCAGCCGC
TTCAGCTGCTCACGATCAATAAAATCAACGGAGGGTCATGATTTCGCGAG
CCTACCGTTCGATGTCTTGAACAAAATCGCAGCGTCATTCACGCTGCCTC
AACTGAGAGCGGCGTCGCTGGTGTGCAAGTCATGGAACGACGCGCTTCGG
CCGTTGAGAGAGGCGATGGTGTTACTAAAATGGGGGAAACGATTCAAGCA
CGGCCGAGGCGTGCGCAAGAACTTGGATAAGGCTCTCGACTCGTTCTTGA
AGGGGGGCGGGTGGGGGGGGTCCACAACTTGCTATGGCTGACGTCTGGGC
TCAAGGAGTGCGACCAAACACTATGCACCTGGTTCTAAGGACGAACTGCG
GCAGCGCACGGCGCGTAGATCGACTAGAAACAACGGAGACCAGCTTAACA
CTAGCCAACACCATCCCGCCACCACGAAGCCGCAATGGCTCGCGCCCCTG
CCGGGCACCCAACCCCCTCGTAAACGCGCAGAGCAAACGCCGATGTGACA
GTCGCCGTCCCACCGTACCCCACCACTCCAGAGCGGGAAGAAGGCAGGAG
CAACCACTGCCTTAGGCGACACAACTGCGTCAACCGCTGCCGCGTAGAGC
GCCCGCATCCGCCCCCCACCGCCACCGACGTGACCAAAGAGCCCACTCCC
AGACCAGAAACACCTCATACACCCTCTCCCACCACCGCCCAAGCCATGAA
CCGAAACGGACGCAACACGCAAAATGACCGCCCCCACACACACCCACAAC
AAGGAA
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