EY710377

Overview
NameEY710377
Unique NameEY710377
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1220
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY710377 vs. ExPASy Swiss-Prot
Match: AB5F_ARATH (ABC transporter F family member 5 OS=Arabidopsis thaliana GN=ABCF5 PE=2 SV=1)

HSP 1 Score: 251.521 bits (641), Expect = 1.819e-66
Identity = 124/156 (79.49%), Postives = 136/156 (87.18%), Query Frame = 2
Query:   11 PKKGKVEVTCFGEHNVLPNYFEQNQAEALDLDKTVLETVAEAAEDWRIDDIKGLLGRCNFKADMLDTKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLDIPSKEMLDEALSEYKGTIITVSHDRYFIEAIINKVLQVNDSNLREKAGANNYY 478
            P KG+V     GEHNVLPNYFEQNQAE LDLDKTVLETV EAAEDWR DDIKGLLGRCNFKADMLD KVSLLSGGEKARLAFCKFMV PSTLLVLDEPTNHLDIPSKEML+EA++EY+GT+I VSHDRYFI+ I+N+V++V D  L + AG  NYY
Sbjct:  476 PVKGEV---ILGEHNVLPNYFEQNQAEVLDLDKTVLETVCEAAEDWRSDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVTPSTLLVLDEPTNHLDIPSKEMLEEAINEYQGTVIAVSHDRYFIKQIVNRVIEVEDGCLEDYAGDYNYY 628          

HSP 2 Score: 23.8682 bits (50), Expect = 1.819e-66
Identity = 10/19 (52.63%), Postives = 14/19 (73.68%), Query Frame = 1
Query:  505 KELEREGHLKKRAPYSRPK 561
            KELERE  L+++AP  + K
Sbjct:  638 KELEREAELEEKAPKVKAK 656          
BLAST of EY710377 vs. ExPASy Swiss-Prot
Match: AB2F_ARATH (ABC transporter F family member 2 OS=Arabidopsis thaliana GN=ABCF2 PE=3 SV=2)

HSP 1 Score: 251.521 bits (641), Expect = 4.034e-66
Identity = 123/156 (78.85%), Postives = 137/156 (87.82%), Query Frame = 2
Query:   11 PKKGKVEVTCFGEHNVLPNYFEQNQAEALDLDKTVLETVAEAAEDWRIDDIKGLLGRCNFKADMLDTKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLDIPSKEMLDEALSEYKGTIITVSHDRYFIEAIINKVLQVNDSNLREKAGANNYY 478
            P +G+V     GEHNVLPNYFEQNQAEA DLDKTV+ETV EAA DWRIDDIK LLGRCNFKADMLD KVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLDIPSKEML+EA++EYKGT+ITVSHDRYFI+ I+N+V++V D  L + AG  NY+
Sbjct:  462 PMRGEV---ILGEHNVLPNYFEQNQAEAQDLDKTVIETVVEAAVDWRIDDIKALLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLDIPSKEMLEEAINEYKGTVITVSHDRYFIKQIVNRVIEVRDGGLMDYAGDYNYF 614          

HSP 2 Score: 22.7126 bits (47), Expect = 4.034e-66
Identity = 9/19 (47.37%), Postives = 14/19 (73.68%), Query Frame = 1
Query:  505 KELEREGHLKKRAPYSRPK 561
            +ELERE  L+++AP  + K
Sbjct:  624 RELEREAELEEKAPKVKAK 642          
BLAST of EY710377 vs. ExPASy Swiss-Prot
Match: YDIF_BACSU (Uncharacterized ABC transporter ATP-binding protein ydiF OS=Bacillus subtilis GN=ydiF PE=3 SV=2)

HSP 1 Score: 117.857 bits (294), Expect = 1.271e-25
Identity = 64/143 (44.76%), Postives = 90/143 (62.94%), Query Frame = 2
Query:   53 NVLPNYFEQNQAEALDLDKTVLETVAEAAEDWRIDDIKGLLGRCNFKADMLDTKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLDIPSKEMLDEALSEYKGTIITVSHDRYFIEAIINKVLQVNDSNLREKAGANNYYS 481
            NV   Y++Q QAE L   K VL+ + +        +I+  LG   F  D +   V  LSGGEKARLA  K M++ +  L+LDEPTNHLD+ SKE+L+ AL +Y GT++ VSHDRYFI  I  +VL+++ S++ E  G  +YY+
Sbjct:  389 NVSVGYYDQEQAE-LTSSKRVLDELWDEYPGLPEKEIRTCLGNFLFSGDDVLKPVHSLSGGEKARLALAKLMLQKANFLILDEPTNHLDLDSKEVLENALIDYPGTLLFVSHDRYFINRIATRVLELSSSHIEEYLGDYDYYT 530          

HSP 2 Score: 85.5001 bits (210), Expect = 6.988e-16
Identity = 43/107 (40.19%), Postives = 65/107 (60.75%), Query Frame = 2
Query:  158 DIKGLLGRCNFKADMLDTKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLDIPSKEMLDEALSEYKGTIITVSHDRYFIEAIINKVLQVNDSNLREKAGANNYY 478
            D++ +L    F      T+V  LSGG+K RLA  K ++    LL+LDEPTNHLDI +   L+  L  Y G I+ VSHDRYF++ ++N+V +V+ +  ++  G  + Y
Sbjct:  141 DVRSVLHGLGFSHFDDSTQVQSLSGGQKTRLALGKLLLTQPDLLILDEPTNHLDIDTLTWLEHYLQGYSGAILIVSHDRYFLDKVVNQVYEVSRAESKKYHGNYSAY 247          
BLAST of EY710377 vs. ExPASy Swiss-Prot
Match: UUP1_HAEIN (ABC transporter ATP-binding protein uup-1 OS=Haemophilus influenzae GN=uup-A PE=3 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 2.742e-20
Identity = 53/117 (45.30%), Postives = 78/117 (66.67%), Query Frame = 2
Query:   68 YFEQNQAEALDLDKTVLETVAEAAEDWRIDDIK----GLLGRCNFKADMLDTKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLDIPSKEMLDEALSEYKGTIITVSHDRYFIE 406
            YF+Q +A+ LD +KTV++ VA+  +D  I+ +K    G L    F      T V  LSGGE+ RL   K ++KP+ LL+LDEPTN LD+ + E+L+E L++Y+GT++ VSHDR FI+
Sbjct:  386 YFDQYRAD-LDPEKTVMDNVADGKQDIEINGVKRHVLGYLQDFLFPPKRAMTPVKALSGGERNRLLLAKLLLKPNNLLILDEPTNDLDVETLELLEEILTDYQGTLLIVSHDRQFID 501          

HSP 2 Score: 72.7886 bits (177), Expect = 4.687e-12
Identity = 42/145 (28.97%), Postives = 79/145 (54.48%), Query Frame = 2
Query:   47 EHNVLPNYFEQNQAEALDLDKTVLETVAEAAEDWRIDD-IKGLLGRCNFKADMLDTKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLDIPSKEMLDEALSEYKGTIITVSHDRYFIEAIINKVLQVNDSNLREKAGANNYY 478
            E++ +    E+N ++ +      ++   E A+ WR ++ I  +L +     +   TK+S LSGG   + A  + +V    +L+LDEPTNHLD+ + E L+  L +++G+I+ +SHDR FI  +  +++ ++   L    G  + Y
Sbjct:  100 EYHQISVQLEENYSDQILSQLEQVQAKLEHADGWRFENKINEVLLKLGLNPN---TKLSALSGGWLRKAALARALVCDPDVLLLDEPTNHLDVEAIEWLENFLLDFQGSIVFISHDRSFIRKMATRIVDLDRGQLVSYPGNYDLY 241          
BLAST of EY710377 vs. ExPASy Swiss-Prot
Match: UUP2_HAEIN (ABC transporter ATP-binding protein uup-2 OS=Haemophilus influenzae GN=uup-B PE=3 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 7.977e-20
Identity = 52/117 (44.44%), Postives = 77/117 (65.81%), Query Frame = 2
Query:   68 YFEQNQAEALDLDKTVLETVAEAAEDWRIDDIK----GLLGRCNFKADMLDTKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLDIPSKEMLDEALSEYKGTIITVSHDRYFIE 406
            YF+Q +A+ LD +K V++ VA+  +D  I+ +K    G L    F      T V  LSGGE+ RL   K ++KP+ LL+LDEPTN LD+ + E+L+E L++Y+GT++ VSHDR FI+
Sbjct:  198 YFDQYRAD-LDPEKIVMDNVADGKQDIEINGVKRHVLGYLQEFLFPPKRAMTPVKALSGGERNRLLLAKLLLKPNNLLILDEPTNDLDVETLELLEEILTDYQGTLLIVSHDRQFID 313          
BLAST of EY710377 vs. ExPASy Swiss-Prot
Match: UUP_ECOLI (ABC transporter ATP-binding protein uup OS=Escherichia coli (strain K12) GN=uup PE=1 SV=2)

HSP 1 Score: 96.2857 bits (238), Expect = 3.959e-19
Identity = 50/122 (40.98%), Postives = 77/122 (63.11%), Query Frame = 2
Query:   68 YFEQNQAEALDLDKTVLETVAEAAEDWRIDD----IKGLLGRCNFKADMLDTKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLDIPSKEMLDEALSEYKGTIITVSHDRYFIEAIINK 421
            YF+Q++AE LD DKTV++ +AE  ++  ++     + G L    F      T V  LSGGE+ RL   +  +KPS LL+LDEPTN LD+ + E+L+E +  Y+GT++ VSHDR F++  + +
Sbjct:  386 YFDQHRAE-LDPDKTVMDNLAEGKQEVMVNGKPRHVLGYLQDFLFHPKRAMTPVRALSGGERNRLLLARLFLKPSNLLILDEPTNDLDVETLELLEELIDSYQGTVLLVSHDRQFVDNTVTE 506          
BLAST of EY710377 vs. ExPASy Swiss-Prot
Match: YFMM_BACSU (Uncharacterized ABC transporter ATP-binding protein yfmM OS=Bacillus subtilis GN=yfmM PE=3 SV=2)

HSP 1 Score: 95.5153 bits (236), Expect = 6.753e-19
Identity = 55/133 (41.35%), Postives = 77/133 (57.89%), Query Frame = 2
Query:    2 EKDPKKGKVEVTCFGEHNVLPNYFEQNQAEALDLDKTVLETVAEAAEDWRIDDIKGLLGRCNFKADMLDTKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLDIPSKEMLDEALSEYKGTIITVSHDRYF 400
            E  P +G VE    GEH +   YFEQ   E  +   T +E V      +   +I+  L +C      ++++VS+LSGGEKA++  CK +   + LLVLDEPTNHLD  +KE L  AL EYKG+I+ +SH+  F
Sbjct:  373 EIQPLEGSVER---GEH-IYTGYFEQEVKETNN--NTCIEEVWSEFPSYTQYEIRAALAKCGLTTKHIESRVSVLSGGEKAKVRLCKLINSETNLLVLDEPTNHLDADAKEELKRALKEYKGSILLISHEPDF 499          
BLAST of EY710377 vs. ExPASy Swiss-Prot
Match: YBIT_ECOLI (Uncharacterized ABC transporter ATP-binding protein ybiT OS=Escherichia coli (strain K12) GN=ybiT PE=1 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 6.753e-19
Identity = 48/138 (34.78%), Postives = 82/138 (59.42%), Query Frame = 2
Query:   53 NVLPNYFEQNQAEALDLDKTVLETVAEAAEDWRIDD-IKGLLGRCNFKADMLDTKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLDIPSKEMLDEALSEYKGTIITVSHDRYFIEAIINKVLQVNDSNLREKAG 463
            N    Y+ Q+     + D TV E +++  ++   +  ++ +LGR  F  D +     +LSGGEK R+ F K M++   +L++DEPTNHLD+ S E L+ AL  Y+GT+I VSHDR F+ ++  ++L++    + + +G
Sbjct:  381 NARIGYYAQDHEYEFENDLTVFEWMSQWKQEGDDEQAVRSILGRLLFSQDDIKKPAKVLSGGEKGRMLFGKLMMQKPNILIMDEPTNHLDMESIESLNMALELYQGTLIFVSHDREFVSSLATRILEITPERVIDFSG 518          
BLAST of EY710377 vs. ExPASy Swiss-Prot
Match: YBIT_ECOL6 (Uncharacterized ABC transporter ATP-binding protein ybiT OS=Escherichia coli O6 GN=ybiT PE=3 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 6.753e-19
Identity = 48/138 (34.78%), Postives = 82/138 (59.42%), Query Frame = 2
Query:   53 NVLPNYFEQNQAEALDLDKTVLETVAEAAEDWRIDD-IKGLLGRCNFKADMLDTKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLDIPSKEMLDEALSEYKGTIITVSHDRYFIEAIINKVLQVNDSNLREKAG 463
            N    Y+ Q+     + D TV E +++  ++   +  ++ +LGR  F  D +     +LSGGEK R+ F K M++   +L++DEPTNHLD+ S E L+ AL  Y+GT+I VSHDR F+ ++  ++L++    + + +G
Sbjct:  381 NARIGYYAQDHEYEFENDLTVFEWMSQWKQEGDDEQAVRSILGRLLFSQDDIKKPAKVLSGGEKGRMLFGKLMMQKPNILIMDEPTNHLDMESIESLNMALELYQGTLIFVSHDREFVSSLATRILEITPERVIDFSG 518          
BLAST of EY710377 vs. ExPASy Swiss-Prot
Match: YBIT_ECO57 (Uncharacterized ABC transporter ATP-binding protein ybiT OS=Escherichia coli O157:H7 GN=ybiT PE=3 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 6.753e-19
Identity = 48/138 (34.78%), Postives = 82/138 (59.42%), Query Frame = 2
Query:   53 NVLPNYFEQNQAEALDLDKTVLETVAEAAEDWRIDD-IKGLLGRCNFKADMLDTKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLDIPSKEMLDEALSEYKGTIITVSHDRYFIEAIINKVLQVNDSNLREKAG 463
            N    Y+ Q+     + D TV E +++  ++   +  ++ +LGR  F  D +     +LSGGEK R+ F K M++   +L++DEPTNHLD+ S E L+ AL  Y+GT+I VSHDR F+ ++  ++L++    + + +G
Sbjct:  381 NARIGYYAQDHEYEFENDLTVFEWMSQWKQEGDDEQAVRSILGRLLFSQDDIKKPAKVLSGGEKGRMLFGKLMMQKPNILIMDEPTNHLDMESIESLNMALELYQGTLIFVSHDREFVSSLATRILEITPERVIDFSG 518          
The following BLAST results are available for this feature:
BLAST of EY710377 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 42
Match NameE-valueIdentityDescription
AB5F_ARATH1.819e-6679.49ABC transporter F family member 5 OS=Arabidopsis t... [more]
AB2F_ARATH4.034e-6678.85ABC transporter F family member 2 OS=Arabidopsis t... [more]
YDIF_BACSU1.271e-2544.76Uncharacterized ABC transporter ATP-binding protei... [more]
UUP1_HAEIN2.742e-2045.30ABC transporter ATP-binding protein uup-1 OS=Haemo... [more]
UUP2_HAEIN7.977e-2044.44ABC transporter ATP-binding protein uup-2 OS=Haemo... [more]
UUP_ECOLI3.959e-1940.98ABC transporter ATP-binding protein uup OS=Escheri... [more]
YFMM_BACSU6.753e-1941.35Uncharacterized ABC transporter ATP-binding protei... [more]
YBIT_ECOLI6.753e-1934.78Uncharacterized ABC transporter ATP-binding protei... [more]
YBIT_ECOL66.753e-1934.78Uncharacterized ABC transporter ATP-binding protei... [more]
YBIT_ECO576.753e-1934.78Uncharacterized ABC transporter ATP-binding protei... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-701-107-C02-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY710377 ID=EY710377; Name=EY710377; organism=Citrus sinensis; type=EST; length=1220bp
GGAGAAAGACCCAAAGAAAGGGAAGGTTGAAGTTACTTGCTTCGGTGAGC
ATAATGTCCTACCAAACTATTTTGAGCAGAATCAGGCTGAGGCACTTGAT
TTGGACAAAACAGTACTTGAGACAGTAGCTGAAGCTGCGGAGGACTGGAG
AATTGATGATATAAAGGGCCTCCTTGGTCGTTGTAATTTCAAAGCTGACA
TGCTTGATACAAAGGTTTCCCTTTTGAGTGGTGGTGAGAAGGCACGTCTT
GCATTTTGCAAATTCATGGTAAAACCATCAACTCTTCTAGTTTTGGATGA
ACCCACTAATCACTTGGATATTCCTTCAAAAGAGATGCTCGATGAGGCCT
TATCAGAGTACAAGGGCACGATAATCACAGTTTCTCATGATCGATACTTC
ATAGAGGCAATAATTAATAAAGTATTGCAGGTTAACGACAGCAATTTGCG
GGAAAAAGCTGGAGCTAACAATTATTACTCAGAGTAAAACCTCAATGCTC
TTGAAAGGAACTAGAACGAGAAGGACACCTCAAAAAGAGGGCTCCATATT
CTAGGCCTAAACAATATGCCAATTGTAAAAAGGAACTCGTAATAAACAAA
TAATGCAGGCTTCCTAGCTCACGACAAATTCACATGTGGTAGGAAACTGC
AAAAGTTGGAAATAGAATTAATCCAGTATATATGAAGAAATAACCCATTG
ACACAAATATATTGAATGAATCTCGAGAAAGATGGTCTAGGTAATAATGC
AAGCAGGGGCTCGCATAATTAATATACACGGAAAATGTTGAATTATAACT
AGAATAGAACTTATGGCAAATTAGATTAATAGTAACAACAGATATAGAAT
AAGATAAATAGCATGCTTATGAAATACTAAGCATATAGAAATACATTATG
AAAAAAACAAAAGAAAGATCTAACACAGGAAATTAACAAAAAATTATAAT
CAAAAACAATAAAGGAGCAAAAAGAGTAACATGAATGATATTAATAAGAT
ATGTAACGAAAGAAAATAAGATTACATCAGACAATATACTACTGCTATAA
AAAACAAATGTATGAGTTACACAATACAGGTTTGACATAAAGTTTTACAA
CTGAATCCAAAAATAGACGAACATTATGAGAGAATGTTCACAAATGATGA
TTATTGGAAAGCAGGTTGTACGAATCATACGTCACACTAAGAACAAAGTA
AAATAAACAATAAGATTAAA
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