EY710375

Overview
NameEY710375
Unique NameEY710375
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1192
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY710375 vs. ExPASy Swiss-Prot
Match: FRS5_ARATH (Protein FAR1-RELATED SEQUENCE 5 OS=Arabidopsis thaliana GN=FRS5 PE=2 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 9.116e-13
Identity = 31/62 (50.00%), Postives = 46/62 (74.19%), Query Frame = 3 
Query:  159 DNEWLRGLYDERHRWVPCYLNNAFWAGMSSTQHSESMNAFFDGYVNSTTTLNAFVKQYICAL 344
            D+EWL+ +Y +R +WVP YL + F+A MS T  S+S+N++FDGY+N++T L+ F K Y  AL
Sbjct:  440 DHEWLQAIYSDRRQWVPVYLRDTFFADMSLTHRSDSINSYFDGYINASTNLSQFFKLYEKAL 501
[Close]
BLAST of EY710375 vs. ExPASy Swiss-Prot
Match: FAR1_ARATH (Protein FAR-RED IMPAIRED RESPONSE 1 OS=Arabidopsis thaliana GN=FAR1 PE=1 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 5.002e-11
Identity = 30/68 (44.12%), Postives = 49/68 (72.06%), Query Frame = 3 
Query:  159 DNEWLRGLYDERHRWVPCYLNNAFWAGMSSTQHSESMNAFFDGYVNSTTTLNAFVKQYICALHIIVQN 362
            ++EWL  L++ R +WVP ++++ F AGMS++Q SES+N+FFD Y++   TL  F++QY     +I+QN
Sbjct:  416 NDEWLLWLHEHRQKWVPTFMSDVFLAGMSTSQRSESVNSFFDKYIHKKITLKEFLRQY----GVILQN 479
The following BLAST results are available for this feature:
BLAST of EY710375 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
FRS5_ARATH9.116e-1350.00Protein FAR1-RELATED SEQUENCE 5 OS=Arabidopsis tha... [more]
FAR1_ARATH5.002e-1144.12Protein FAR-RED IMPAIRED RESPONSE 1 OS=Arabidopsis... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C3-701-107-B12-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY710375 ID=EY710375; Name=EY710375; organism=Citrus sinensis; type=EST; length=1192bp
AAAGTGTGTTCCCCCAGAGAAGAAAGCTTACGGGGGCGTCATAAAAAATA
TGCGTAACATAATTAATAGTCTTTGCATTGTGCTGTTTATGATTCCCAGA
GTGCTACGAAATTTTGAGGACACTTGGCACCATATGATTACAGAATATGA
TTTCGGGGGATAACGAATGGTTACGAGGCTTATATGACGAGAGGCATCGT
TGGGTACCTTGTTATCTTAACAATGCGTTTTGGGCGGGAATGTCATCTAC
TCAACATAGTGAAAGCATGAATGCATTTTTTGATGGGTATGTTAACTCAA
CGACTACTTTGAATGCATTTGTAAAGCAATACATTTGTGCATTGCATATT
ATAGTTCAAAATGTCAATTGAATATTATGTCCGGTGTCTTTCCCACAAAT
TGCCATGTATAATCGAATACGCGATGGAAAGGACATTCCTAGATGTGTAT
ACTATCTCCAAAAATCAGGAAATTCAGCATCAAATGTATAGAATAATGCA
TTGCGAATAATTAAATTCCTGGCGAAGGGAGATATAGTACAGCAGAAGTC
AACTATTGATTAGTTGTGAAAGAAGCTTGTTGATATTTATTTAGTATAGA
ATGTGGATAATCTTGAGAATGTAGTCAGNGTTCTATTAAGATAAATATAT
GTCAAGATACTTTGATGTCTGACTATATCAGCTAGCATTATATCCATTAT
ATTATTCTCAATGAGGAAGAGAATCGACTCGATCCTTGTAAAAACAATGA
GTAGCGATAGATACAATCGAATAGACAAAATAATTATATAGAACATATGG
AACGACCAAATTGAACACAAGTAAACGAAACTAATAAAATGTATAATGAA
CATGATATCCTACACAATCAAATAATGAAATTTGTCAGTGCAATGATATA
TATAAAATGAATATTTCATGATAAAGCATACTATTAAATGATCGGTAGTG
ATACGCACACAGCAGACCGAAGTAAGCAAAAACGAGAAGACACGATACGA
CACATCATACCTAGGATGACATATGACAGACATTCATACTAATAACCAAA
GCATACAAGACAACAACTGTCTATGCATAGACAAATATCCAATCAACAAC
AACACAAAAAGACTAAACGAACAACGTTGGAGTTAAACGACAAAGGAATG
CTGTGATCTATATTATGATTAAAAATAATAATATTATTAACA
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