EY685055

Overview
NameEY685055
Unique NameEY685055
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length569
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY685055 vs. ExPASy Swiss-Prot
Match: AB2G_ARATH (ABC transporter G family member 2 OS=Arabidopsis thaliana GN=ABCG2 PE=2 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 2.135e-18
Identity = 41/65 (63.08%), Postives = 49/65 (75.38%), Query Frame = 2
Query:   11 VKSMGHVLGKNITGSSCLATGGKILEHSGATDISKWNCFWLTVGFGVLFRVLFYFILLLGSKNKR 205
            +KSM  VLG N+T  +C+ TG  IL+  G TDISKWNC W+TV +G  FRVLFYF LL+GSKNKR
Sbjct:  690 LKSMSGVLGTNVTAETCVTTGIDILKQQGITDISKWNCLWITVAWGFFFRVLFYFTLLIGSKNKR 754          
BLAST of EY685055 vs. ExPASy Swiss-Prot
Match: AB20G_ARATH (ABC transporter G family member 20 OS=Arabidopsis thaliana GN=ABCG20 PE=2 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 1.059e-17
Identity = 40/65 (61.54%), Postives = 49/65 (75.38%), Query Frame = 2
Query:   11 VKSMGHVLGKNITGSSCLATGGKILEHSGATDISKWNCFWLTVGFGVLFRVLFYFILLLGSKNKR 205
            +KSM  VLG N+T  +C+ TG  IL+  G T+ISKWNC W+TV +G  FRVLFYF LL+GSKNKR
Sbjct:  674 LKSMSGVLGINVTAETCVTTGIDILKQQGITEISKWNCLWITVAWGFFFRVLFYFTLLIGSKNKR 738          
BLAST of EY685055 vs. ExPASy Swiss-Prot
Match: AB6G_ARATH (ABC transporter G family member 6 OS=Arabidopsis thaliana GN=ABCG6 PE=2 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 1.171e-16
Identity = 38/63 (60.32%), Postives = 46/63 (73.02%), Query Frame = 2
Query:   17 SMGHVLGKNITGSSCLATGGKILEHSGATDISKWNCFWLTVGFGVLFRVLFYFILLLGSKNKR 205
            +M   LG  IT S+CL TG  IL+  G TD++KWNC W+TV +G  FR+LFYF LLLGSKNKR
Sbjct:  664 TMSKSLGMRITSSTCLTTGYDILQQQGVTDLTKWNCLWVTVAWGFFFRILFYFSLLLGSKNKR 726          
BLAST of EY685055 vs. ExPASy Swiss-Prot
Match: AB16G_ARATH (ABC transporter G family member 16 OS=Arabidopsis thaliana GN=ABCG16 PE=2 SV=2)

HSP 1 Score: 82.4185 bits (202), Expect = 1.691e-15
Identity = 36/63 (57.14%), Postives = 45/63 (71.43%), Query Frame = 2
Query:   17 SMGHVLGKNITGSSCLATGGKILEHSGATDISKWNCFWLTVGFGVLFRVLFYFILLLGSKNKR 205
            S+   +G  I+ S+CL TG  +L+  G T +SKWNC  +TVGFG LFR+LFY  LLLGSKNKR
Sbjct:  673 SVSRSIGMRISSSTCLTTGADVLKQQGVTQLSKWNCLLITVGFGFLFRILFYLCLLLGSKNKR 735          
BLAST of EY685055 vs. ExPASy Swiss-Prot
Match: AB1G_ARATH (ABC transporter G family member 1 OS=Arabidopsis thaliana GN=ABCG1 PE=2 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 3.190e-14
Identity = 34/58 (58.62%), Postives = 41/58 (70.69%), Query Frame = 2
Query:   32 LGKNITGSSCLATGGKILEHSGATDISKWNCFWLTVGFGVLFRVLFYFILLLGSKNKR 205
            LG  I+ ++CL TG  IL   G   +SKWNC ++TV FG  FR+LFYF LLLGSKNKR
Sbjct:  682 LGVTISSTTCLTTGSDILRQQGVVQLSKWNCLFITVAFGFFFRILFYFTLLLGSKNKR 739          
BLAST of EY685055 vs. ExPASy Swiss-Prot
Match: AB17G_ARATH (ABC transporter G family member 17 OS=Arabidopsis thaliana GN=ABCG17 PE=2 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 1.212e-13
Identity = 32/65 (49.23%), Postives = 44/65 (67.69%), Query Frame = 2
Query:   11 VKSMGHVLGKNITGSSCLATGGKILEHSGATDISKWNCFWLTVGFGVLFRVLFYFILLLGSKNKR 205
            +++M   LG  +T S+CL TG  +L+  G   + KW C W+T+ +G  FR+LFYF LLLGSKNKR
Sbjct:  597 LETMSGYLGMELTESTCLTTGSDLLKQHGIEQLDKWGCLWVTLAWGFFFRILFYFSLLLGSKNKR 661          
BLAST of EY685055 vs. ExPASy Swiss-Prot
Match: AB18G_ARATH (ABC transporter G family member 18 OS=Arabidopsis thaliana GN=ABCG18 PE=2 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 3.527e-13
Identity = 32/58 (55.17%), Postives = 41/58 (70.69%), Query Frame = 2
Query:   32 LGKNITGSSCLATGGKILEHSGATDISKWNCFWLTVGFGVLFRVLFYFILLLGSKNKR 205
            LG  IT S+CL TG  +L   G T +SKW+C W+T+ +G+ FR+LFY  LL GSKNKR
Sbjct:  650 LGTKITESTCLRTGPDLLMQQGITQLSKWDCLWITLAWGLFFRILFYLSLLFGSKNKR 707          
BLAST of EY685055 vs. ExPASy Swiss-Prot
Match: AB19G_ARATH (ABC transporter G family member 19 OS=Arabidopsis thaliana GN=ABCG19 PE=1 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.026e-12
Identity = 31/65 (47.69%), Postives = 43/65 (66.15%), Query Frame = 2
Query:   11 VKSMGHVLGKNITGSSCLATGGKILEHSGATDISKWNCFWLTVGFGVLFRVLFYFILLLGSKNKR 205
            ++++   L   IT S+CL TG  +L   G T +SKW+C W+T   G+ FR+LFYF LL GS+NKR
Sbjct:  660 LETLSKSLRTKITESTCLRTGSDLLAQQGITQLSKWDCLWITFASGLFFRILFYFALLFGSRNKR 724          
The following BLAST results are available for this feature:
BLAST of EY685055 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 8
Match NameE-valueIdentityDescription
AB2G_ARATH2.135e-1863.08ABC transporter G family member 2 OS=Arabidopsis t... [more]
AB20G_ARATH1.059e-1761.54ABC transporter G family member 20 OS=Arabidopsis ... [more]
AB6G_ARATH1.171e-1660.32ABC transporter G family member 6 OS=Arabidopsis t... [more]
AB16G_ARATH1.691e-1557.14ABC transporter G family member 16 OS=Arabidopsis ... [more]
AB1G_ARATH3.190e-1458.62ABC transporter G family member 1 OS=Arabidopsis t... [more]
AB17G_ARATH1.212e-1349.23ABC transporter G family member 17 OS=Arabidopsis ... [more]
AB18G_ARATH3.527e-1355.17ABC transporter G family member 18 OS=Arabidopsis ... [more]
AB19G_ARATH1.026e-1247.69ABC transporter G family member 19 OS=Arabidopsis ... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C2-003-008-B10-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY685055 ID=EY685055; Name=EY685055; organism=Citrus sinensis; type=EST; length=569bp
AGATCAAGCTGTTAAAAGCATGGGCCATGTGTTGGGCAAAAACATTACTG
GCTCGTCTTGTTTGGCCACTGGGGGTAAAATTCTAGAACACAGTGGAGCA
ACAGATATCAGTAAATGGAACTGCTTTTGGCTTACCGTTGGGTTTGGGGT
CCTCTTTAGGGTTCTGTTTTACTTCATTTTGTTGCTTGGCAGCAAGAATA
AGAGAATGTAAATGATAATAATTTTGCTATTTATTTTCCTTTTTGCAACT
TGTAATACCTAAAACCGTCAGTCTTTCTTTGTCTTTGACTTTATATGGCA
ATAAAGAAATTGACCAAATGATTGCCAAGGGTCTGGGCTGGGCCGGGCTG
GGCTTTGGTCTAGGTTTTCCTTGAGCGTGGGAGTGATGAGCATTATTCAC
AGTTCACTGGTGCACATACACATTGTATTCTTAGGAATTCCATAAAGGAT
GCATTTGGTGCGCCGCATTGTATTGAGTTGTATCAAATTATAATGAATTG
ATAATACAGTAATTGTATCAAATTATAATAAATTAATAATATTTGATGCG
TAATAAAAAAAAAAAAAAA
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