EY685054

Overview
NameEY685054
Unique NameEY685054
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length963
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY685054 vs. ExPASy Swiss-Prot
Match: AMYB_IPOBA (Beta-amylase OS=Ipomoea batatas GN=BMY1 PE=1 SV=4)

HSP 1 Score: 129.413 bits (324), Expect = 3.010e-29
Identity = 76/200 (38.00%), Postives = 109/200 (54.50%), Query Frame = -3
Query:  221 FFGRDVPWNSEYDGFFMEWYSGKVIQHGVEIFSSCQRKIIPRNWLKNSLEK*PEFTGTTDRGPMRLELTAGYYNTRYCDGYIPIARMLAKHGAILNFTCMEMRDREQPGNANCSPEGLVQQVKMATRTAGVELAGENALERYDADAYAQVLATSNLDVGN-------GLGAFTYVRMHKKLLESDNWRNLVEFVQRMSSE 799
            FF  +  + ++   FF+ WYS K+I HG ++     +  +      N   K        +      ELTAG+YN    DGY PIARMLA+H A LNFTC+EMRD EQP  A  +P+ LVQQV  +     +++AGENAL RYDA AY Q+L     +  N        +   TY+R+   LL++DN+    +FV++M ++
Sbjct:  250 FFRPNGTYKTDMGKFFLTWYSNKLIIHGDQVLEEANKVFVGLR--VNIAAKVSGIHWWYNHVSHAAELTAGFYNVAGRDGYRPIARMLARHHATLNFTCLEMRDSEQPAEAKSAPQELVQQVLSSGWKEYIDVAGENALPRYDATAYNQMLLNVRPNGVNLNGPPKLKMSGLTYLRLSDDLLQTDNFELFKKFVKKMHAD 447          
BLAST of EY685054 vs. ExPASy Swiss-Prot
Match: AMYB_SOYBN (Beta-amylase OS=Glycine max GN=BMY1 PE=1 SV=3)

HSP 1 Score: 129.028 bits (323), Expect = 3.932e-29
Identity = 81/213 (38.03%), Postives = 109/213 (51.17%), Query Frame = -3
Query:  221 GFFGRDVPWNSEYDGFFMEWYSGKVIQHGVEI-------FSSCQRKIIPRN-----WLKNSLEK*PEFTGTTDRGPMRLELTAGYYNTRYCDGYIPIARMLAKHGAILNFTCMEMRDREQPGNANCSPEGLVQQVKMATRTAGVELAGENALERYDADAYAQVLATSNLDVGNGLG-------AFTYVRMHKKLLESDNWRNLVEFVQRMSSE 802
            GFF  +  + +E   FF+ WYS K++ HG +I       F  C+ K+  +      W K                    ELTAGYYN    DGY PIARML++H AILNFTC+EMRD EQP +A   P+ LVQQV        + +AGENAL RYDA AY Q++  +     N  G         TY+R+   LL+  N+    +FV +M ++
Sbjct:  247 GFFKSNGTYVTEKGKFFLTWYSNKLLNHGDQILDEANKAFLGCKVKLAIKVSGIHWWYKVENH--------------AAELTAGYYNLNDRDGYRPIARMLSRHHAILNFTCLEMRDSEQPSDAKSGPQELVQQVLSGGWREDIRVAGENALPRYDATAYNQIILNAKPQGVNNNGPPKLSMFGVTYLRLSDDLLQKSNFNIFKKFVLKMHAD 445          
BLAST of EY685054 vs. ExPASy Swiss-Prot
Match: AMYB_ARATH (Beta-amylase OS=Arabidopsis thaliana GN=BMY1 PE=2 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 1.951e-28
Identity = 78/212 (36.79%), Postives = 108/212 (50.94%), Query Frame = -3
Query:  221 GFFGRDVPWNSEYDGFFMEWYSGKVIQHGVEIFSSCQR-----------KIIPRNWLKNSLEK*PEFTGTTDRGPMRLELTAGYYNTRYCDGYIPIARMLAKHGAILNFTCMEMRDREQPGNANCSPEGLVQQVKMATRTAGVELAGENALERYDADAYAQVLATSNLDVGNGLG-------AFTYVRMHKKLLESDNWRNLVEFVQRMSSE 802
            GFF +D  + SE   FFM WYS K+I HG +I     +           K+   +WL N                   ELTAGYYN    DGY PIARML+KH  ILNFTC+EM+D +    A  +P+ LVQ+V       G+E+AGENALE Y A  Y Q+L  +  +  N  G        FTY+R+   + + +N+    + V++M ++
Sbjct:  249 GFFKKDGTYVSEKGKFFMTWYSNKLIFHGDQILGEANKIFAGLKVNLAAKVSGIHWLYNHHSH-------------AAELTAGYYNLFKRDGYRPIARMLSKHYGILNFTCLEMKDTDNTAEALSAPQELVQEVLSKAWKEGIEVAGENALETYGAKGYNQILLNARPNGVNPNGKPKLRMYGFTYLRLSDTVFQENNFELFKKLVRKMHAD 447          
BLAST of EY685054 vs. ExPASy Swiss-Prot
Match: AMYB_MEDSA (Beta-amylase OS=Medicago sativa GN=BMY1 PE=2 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 8.198e-27
Identity = 76/207 (36.71%), Postives = 111/207 (53.62%), Query Frame = -3
Query:  221 FFGRDVPWNSEYDGFFMEWYSGKVIQHGVEI-------FSSCQRKIIPRNWLKNSLEK*PEFTGTTDRGPMRLELTAGYYNTRYCDGYIPIARMLAKHGAILNFTCMEMRDREQPGNANCSPEGLVQQVKMATRTAGVELAGENALERYDADAYAQVLATSNLDVGNGLG-------AFTYVRMHKKLLESDNWRNLVEFVQRMSSE 799
            FF  +  + +E   FF+ WYS +++ HG +I       F  C+ K+  +    +   K P             ELTAGYYN    DGY PIA+++++H AILNFTC+EMRD EQ  +A+ SP+ LVQQV        +E+AGENAL RYDA AY Q++  +     N  G         TY+R+   L++  N+    +FV +M ++
Sbjct:  248 FFKTNGTYLTEKGKFFLTWYSNQLLNHGDQILDEANKAFLGCKVKLAIKVSGIHWWYKAPNHAA---------ELTAGYYNLDDRDGYRPIAKIVSRHHAILNFTCLEMRDSEQSSDAHSSPQKLVQQVLSGGWRENIEVAGENALSRYDATAYNQIILNARPQGVNKDGPPKLRMYGVTYLRLSDDLMQQSNFDIFKKFVVKMHAD 445          
BLAST of EY685054 vs. ExPASy Swiss-Prot
Match: AMYB_VIGUN (Beta-amylase OS=Vigna unguiculata GN=BMY1 PE=2 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 1.398e-26
Identity = 74/200 (37.00%), Postives = 104/200 (52.00%), Query Frame = -3
Query:  221 FFGRDVPWNSEYDGFFMEWYSGKVIQHGVEIFSSCQRKIIPRNWLKNSLEK*PEFTGTTDRGPMRLELTAGYYNTRYCDGYIPIARMLAKHGAILNFTCMEMRDREQPGNANCSPEGLVQQVKMATRTAGVELAGENALERYDADAYAQVLATSNLDVGNGLG-------AFTYVRMHKKLLESDNWRNLVEFVQRMSSE 799
            FF  +  + +E   FF+ WYS +++ HG EI     +  +      N   K               ELTAGYYN    DGY PIA+M+++H A LNFTC+EMRD EQ  +A   P+ LVQQV        +E+AGENAL RYDA AY Q++  +     N  G         TY+R+  +LL+  N+    +FV +M ++
Sbjct:  248 FFKTNGTYLTEKGKFFLTWYSNQLLNHGDEILDEANKAFL--GCKVNLAIKVSGIHWWYKAQNHAAELTAGYYNLDDRDGYRPIAKMVSRHHASLNFTCLEMRDSEQSSDAQSGPQELVQQVLSGGWRENIEVAGENALSRYDATAYNQIILNARPQGVNKDGPPKHRMYGVTYLRLSDELLQQSNFDIFKKFVVKMHAD 445          
BLAST of EY685054 vs. ExPASy Swiss-Prot
Match: AMYB_TRIRP (Beta-amylase OS=Trifolium repens GN=BMY1 PE=2 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 1.826e-26
Identity = 75/211 (35.55%), Postives = 109/211 (51.66%), Query Frame = -3
Query:  221 FFGRDVPWNSEYDGFFMEWYSGKVIQHGVEI-------FSSCQRKIIPR----NWLKNSLEK*PEFTGTTDRGPMRLELTAGYYNTRYCDGYIPIARMLAKHGAILNFTCMEMRDREQPGNANCSPEGLVQQVKMATRTAGVELAGENALERYDADAYAQVLATSNLDVGNGLG-------AFTYVRMHKKLLESDNWRNLVEFVQRMSSE 799
            FF  +  + +E   FF+ WYS +++ HG +I       F  C+ K+  +    +W   +                  ELTAGYYN    DGY PIA+M+++H  ILNFTC+EMRD EQ  +A  +P+ LVQQV        +E+AGENAL RYDA AY Q++  +     N  G         TY+R+   LL+  N+    +FV +M ++
Sbjct:  248 FFKTNGTYLTEKGKFFLTWYSNQLLNHGDQILDEANKAFLGCKVKLAIKVSGIHWWYKAQNH-------------AAELTAGYYNLDDRDGYRPIAKMVSRHHGILNFTCLEMRDSEQSSDAQSAPQELVQQVLSGGWRENIEVAGENALSRYDATAYNQIILNARPQGVNKDGPPKLRMYGVTYLRLSDDLLQESNFEIFKKFVVKMHAD 445          
BLAST of EY685054 vs. ExPASy Swiss-Prot
Match: AMYB_WHEAT (Beta-amylase OS=Triticum aestivum GN=BMY1 PE=2 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 3.115e-26
Identity = 78/198 (39.39%), Postives = 104/198 (52.53%), Query Frame = -3
Query:  230 FFGRDVPWNSEYDGFFMEWYSGKVIQHGVEIFSSCQRKIIP-RNWLKNSLEK*PEFTGTTDRGPMRLELTAGYYNTRYCDGYIPIARMLAKHGAILNFTCMEMRDREQPGNANCSPEGLVQQVKMATRTAGVELAGENALERYDADAYAQVLATS-------NLDVGNGLGAFTYVRMHKKLLESDNWRNLVEFVQRM 799
            FF  +  + +E   FF+ WYS K+I+HG +I     +  +  R  L   +     +    +      ELTAGYYN    DGY  IARML +H A +NFTC EMRD EQ   A  +PE LVQQV  A    G+ +A ENAL RYDA AY  +L  +       N    + L  FTY+R+  +LLE  N+     FV++M
Sbjct:  245 FFKDNGTYLTEKGKFFLSWYSNKLIKHGDKILDEANKVFLGCRVQLAIKISGIHWWYRVPNHAA---ELTAGYYNLDDRDGYRTIARMLTRHHASMNFTCAEMRDSEQSEEAKSAPEELVQQVLSAGWREGLHVACENALGRYDATAYNTILRNARPKGINKNGPPEHKLFGFTYLRLSNELLEGQNYATFQTFVEKM 439          
BLAST of EY685054 vs. ExPASy Swiss-Prot
Match: AMYB_MAIZE (Beta-amylase OS=Zea mays GN=BMY1 PE=2 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 3.115e-26
Identity = 78/208 (37.50%), Postives = 102/208 (49.04%), Query Frame = -3
Query:  230 FFGRDVPWNSEYDGFFMEWYSGKVIQHGVEIFSSCQR-----------KIIPRNWLKNSLEK*PEFTGTTDRGPMRLELTAGYYNTRYCDGYIPIARMLAKHGAILNFTCMEMRDREQPGNANCSPEGLVQQVKMATRTAGVELAGENALERYDADAYAQVLATS-------NLDVGNGLGAFTYVRMHKKLLESDNWRNLVEFVQRM 799
            FF  +  + ++   FF+ WYS K+I+HG +I     +           K+   +W  N     P             ELTAGYYN    DGY  IA ML +H A +NFTC EMRD EQ   A  +PE LVQQV  A    G+ LA ENAL RYDA AY  +L  +       N    + L  FTY+R+  +L +  N+     FV+RM
Sbjct:  245 FFADNGTYQTDKGKFFLTWYSNKLIKHGDKILDEANKVFLGCKVQLAIKVSGIHWWYNV----PNHAA---------ELTAGYYNLDDRDGYRTIAHMLTRHRASMNFTCAEMRDSEQSSEAKSAPEELVQQVLSAGWREGLNLACENALNRYDATAYNTILRNARPQGINKNGPPEHKLHGFTYLRVSDELFQEQNYTTFKTFVRRM 439          
BLAST of EY685054 vs. ExPASy Swiss-Prot
Match: AMYB_HORVU (Beta-amylase OS=Hordeum vulgare GN=BMY1 PE=1 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 9.064e-26
Identity = 85/221 (38.46%), Postives = 104/221 (47.06%), Query Frame = -3
Query:  191 FFGRDVPWNSEYDGFFMEWYSGKVIQHGVEIFSSCQR-----------KIIPRNWLKNSLEK*PEFTGTTDRGPMRLELTAGYYNTRYCDGYIPIARMLAKHGAILNFTCMEMRDREQPGNANCSPEGLVQQVKMATRTAGVELAGENALERYDADAYAQVLATSNLDVGNGLG-------AFTYVRMHKKLLESDNWRNLVEFVQRMSSEGRRPRLPEWD 799
            FF  +  + SE   FF+ WYS  +I+HG  I     +           KI   +W      K P             ELTAGYYN    DGY  IARML +H A +NFTC EMRD EQ   A  +PE LVQQV  A    G+ +A ENAL RYD  AY  +L  +     N  G        FTY+R+  +L+E  N+ N   FV RM      PR P  D
Sbjct:  245 FFRDNGTYLSEKGRFFLAWYSNNLIKHGDRILDEANKVFLGYKVQLAIKISGIHW----WYKVPSHAA---------ELTAGYYNLHDRDGYRTIARMLKRHRASINFTCAEMRDLEQSSQAMSAPEELVQQVLSAGWREGLNVACENALPRYDPTAYNTILRNARPHGINQSGPPEHKLFGFTYLRLSNQLVEGQNYVNFKTFVDRM--HANLPRDPYVD 450          
BLAST of EY685054 vs. ExPASy Swiss-Prot
Match: AMYB_HORSP (Beta-amylase OS=Hordeum spontaneum GN=BMY1 PE=1 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 1.546e-25
Identity = 84/221 (38.01%), Postives = 104/221 (47.06%), Query Frame = -3
Query:  191 FFGRDVPWNSEYDGFFMEWYSGKVIQHGVEIFSSCQR-----------KIIPRNWLKNSLEK*PEFTGTTDRGPMRLELTAGYYNTRYCDGYIPIARMLAKHGAILNFTCMEMRDREQPGNANCSPEGLVQQVKMATRTAGVELAGENALERYDADAYAQVLATSNLDVGNGLG-------AFTYVRMHKKLLESDNWRNLVEFVQRMSSEGRRPRLPEWD 799
            FF  +  + +E   FF+ WYS  +I+HG  I     +           KI   +W      K P             ELTAGYYN    DGY  IARML +H A +NFTC EMRD EQ   A  +PE LVQQV  A    G+ +A ENAL RYD  AY  +L  +     N  G        FTY+R+  +L+E  N+ N   FV RM      PR P  D
Sbjct:  245 FFRDNGTYLTEKGRFFLAWYSNNLIKHGDRILDEANKVFLGYKVQLAIKISGIHW----WYKVPSHAA---------ELTAGYYNLHDRDGYRTIARMLKRHRASINFTCAEMRDSEQSSQAMSAPEELVQQVLSAGWREGLNVACENALPRYDPTAYNTILRNARPHGINQSGPPEHKLFGFTYLRLSNQLVEGQNYVNFKTFVDRM--HANLPRDPYVD 450          
The following BLAST results are available for this feature:
BLAST of EY685054 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 11
Match NameE-valueIdentityDescription
AMYB_IPOBA3.010e-2938.00Beta-amylase OS=Ipomoea batatas GN=BMY1 PE=1 SV=4[more]
AMYB_SOYBN3.932e-2938.03Beta-amylase OS=Glycine max GN=BMY1 PE=1 SV=3[more]
AMYB_ARATH1.951e-2836.79Beta-amylase OS=Arabidopsis thaliana GN=BMY1 PE=2 ... [more]
AMYB_MEDSA8.198e-2736.71Beta-amylase OS=Medicago sativa GN=BMY1 PE=2 SV=1[more]
AMYB_VIGUN1.398e-2637.00Beta-amylase OS=Vigna unguiculata GN=BMY1 PE=2 SV=... [more]
AMYB_TRIRP1.826e-2635.55Beta-amylase OS=Trifolium repens GN=BMY1 PE=2 SV=1[more]
AMYB_WHEAT3.115e-2639.39Beta-amylase OS=Triticum aestivum GN=BMY1 PE=2 SV=... [more]
AMYB_MAIZE3.115e-2637.50Beta-amylase OS=Zea mays GN=BMY1 PE=2 SV=1[more]
AMYB_HORVU9.064e-2638.46Beta-amylase OS=Hordeum vulgare GN=BMY1 PE=1 SV=1[more]
AMYB_HORSP1.546e-2538.01Beta-amylase OS=Hordeum spontaneum GN=BMY1 PE=1 SV... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C2-003-008-B07-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY685054 ID=EY685054; Name=EY685054; organism=Citrus sinensis; type=EST; length=963bp
CCAGTGTCATGATGCACATCTACTACAATGGTTTTGTACTATTTTTCCTT
TCTTGTCATCATTATGATTTATGATATAATGTGGTGTTATACTAAAACAG
TCAAAATACATTTTACACAACAGCAACTTCCTTGGGTTTCTTCCCATTCT
TCCCTTTAACAAAGCCAACATAAAGGTCACTTCCAGTTGAGTCCCACTCT
GGAAGTCTTGGCCTCCTGCCTTCCGATGACATTCTTTGCACAAACTCTAC
CAAGTTTCTCCAGTTGTCACTCTCTAACAATTTCTTGTGCATTCTTACAT
ATGTAAATGCACCCAACCCGTTGCCAACATCTAAATTGCTGGTTGCCAGA
ACTTGTGCATATGCATCTGCATCATATCTCTCCAGTGCATTCTCCCCGGC
AAGTTCTACTCCAGCTGTCCTTGTTGCCATCTTTACTTGCTGAACTAATC
CTTCTGGTGAGCAGTTCGCATTACCAGGCTGTTCTCTGTCTCTCATTTCC
ATGCAGGTGAAGTTTAATATAGCTCCATGTTTAGCCAGCATTCGTGCTAT
TGGTATGTAACCATCACAATACCTAGTATTGTAGTATCCGGCTGTCAATT
CCAGCCGCATGGGACCTCGATCTGTAGTGCCAGTGAATTCCGGCTACTTT
TCCAGAGAGTTTTTGAGCCAATTCCTTGGAATAATTTTCCTTTGGCAGCT
GCTAAAAATTTCAACCCCATGTTGAATTACCTTTCCCGAATACCATTCCA
TGAAAAAACCGTCATACTCAGAGTTCCAAGGTACATCTCTTCCGAAAAAA
CCCTGGAACTTCAGGAAAATTGATTATACTGGGCAAAAATCTTAAGGCCC
CCACCCTTCCCCACACCCCCTAAAAAAAAGTCCCCCTTCTGAAAAGCTTC
TCAAGGAACCTCCCACTATCCGTTTTTTGGGAATGGGAAAGCCAGTTTTC
AAAATGAAAAAAA
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