EY710336
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY710336 vs. ExPASy Swiss-Prot
Match: GGPPS_HEVBR (Geranylgeranyl pyrophosphate synthetase, chloroplastic OS=Hevea brasiliensis GN=GGPS PE=1 SV=1) HSP 1 Score: 193.356 bits (490), Expect = 1.765e-48 Identity = 92/172 (53.49%), Postives = 116/172 (67.44%), Query Frame = 2 Query: 179 PTFQFEEYMTSKSKKVDKALDEALPMQHPEKIHEAMRYSLLAGGKRIRPVLCIASCELVGGDESLVMPMACALEMTHTMSLIHDDLPALDNDDLRRGKPTNHKVFGEPTXXXXXXXXXXXXFEHVAAKTVGVSTDRVVRAFTEXXXXXXXXXXXXXQVTDL*REGKEVILIE 694 P+F F+ YM K +++AL+ A+P+Q P KIHE+MRYSLLAGGKR+RP LC+A+CELVGG++S+ MP ACA+EM HTMSLIHDDLP +DNDDLRRGKPTNH VFGE FEH+A T+ VS+ R+VRA E QV D+ EG + +E Sbjct: 75 PSFDFKSYMLQKGNSINQALEAAIPLQEPAKIHESMRYSLLAGGKRVRPALCLAACELVGGNDSMAMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHIVFGEDVAVLAGDALLAFAFEHIAVSTLNVSSARIVRAVGELAKAIGAEGLVAGQVVDINSEGSSEVDLE 246
BLAST of EY710336 vs. ExPASy Swiss-Prot
Match: GGPP1_ARATH (Geranylgeranyl pyrophosphate synthetase 1, chloroplastic OS=Arabidopsis thaliana GN=GGPS1 PE=2 SV=2) HSP 1 Score: 187.578 bits (475), Expect = 9.682e-47 Identity = 97/169 (57.40%), Postives = 116/169 (68.64%), Query Frame = 2 Query: 182 TFQFEEYMTSKSKKVDKALDEALPMQHPEKIHEAMRYSLLAGGKRIRPVLCIASCELVGGDESLVMPMACALEMTHTMSLIHDDLPALDNDDLRRGKPTNHKVFGEPTXXXXXXXXXXXXFEHVAAKTVG--VSTDRVVRAFTEXXXXXXXXXXXXXQVTDL*REGKEV 682 +F F Y+ +K++ V+KALD A+P++ P KIHEAMRYSLLAGGKR+RPVLCIA+CELVGG+ES MP ACA+EM HTMSLIHDDLP +DNDDLRRGKPTNHKVFGE FEH+A+ T VS RVVRA E QV D+ EG ++ Sbjct: 73 SFDFMSYIITKAELVNKALDSAVPLREPLKIHEAMRYSLLAGGKRVRPVLCIAACELVGGEESTAMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVLAGDALLSFAFEHLASATSSDVVSPVRVVRAVGELAKAIGTEGLVAGQVVDISSEGLDL 241
BLAST of EY710336 vs. ExPASy Swiss-Prot
Match: GGPPS_SINAL (Geranylgeranyl pyrophosphate synthetase, chloroplastic/chromoplastic OS=Sinapis alba GN=GGPS1 PE=1 SV=1) HSP 1 Score: 187.193 bits (474), Expect = 1.265e-46 Identity = 97/174 (55.75%), Postives = 117/174 (67.24%), Query Frame = 2 Query: 164 VKIALPTFQFEEYMTSKSKKVDKALDEALPMQHPEKIHEAMRYSLLAGGKRIRPVLCIASCELVGGDESLVMPMACALEMTHTMSLIHDDLPALDNDDLRRGKPTNHKVFGEPTXXXXXXXXXXXXFEHVAAKTVG-VSTDRVVRAFTEXXXXXXXXXXXXXQVTDL*REGKEV 682 +K + +F F Y+ K+ V+KALD A+P++ P KIHEAMRYSLLAGGKR+RPVLCIA+CELVGG+ESL MP CA+EM HTMSLIHDDLP +DNDDLRRGKPTNHKV+GE FEH+A+ T VS RVVRA E QV D+ EG ++ Sbjct: 63 LKSSSSSFDFMSYIIRKADSVNKALDSAVPLREPLKIHEAMRYSLLAGGKRVRPVLCIAACELVGGEESLAMPARCAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVYGEDVAVLAGDALLSFAFEHLASATSSEVSPARVVRAVGELAKAIGTEGLVAGQVVDISSEGLDL 236
BLAST of EY710336 vs. ExPASy Swiss-Prot
Match: GGPPS_CATRO (Geranylgeranyl pyrophosphate synthetase, chloroplastic OS=Catharanthus roseus GN=GGPS1 PE=3 SV=1) HSP 1 Score: 186.808 bits (473), Expect = 1.652e-46 Identity = 91/164 (55.49%), Postives = 113/164 (68.90%), Query Frame = 2 Query: 182 TFQFEEYMTSKSKKVDKALDEALPMQHPEKIHEAMRYSLLAGGKRIRPVLCIASCELVGGDESLVMPMACALEMTHTMSLIHDDLPALDNDDLRRGKPTNHKVFGEPTXXXXXXXXXXXXFEHVAAKTVGVSTDRVVRAFTEXXXXXXXXXXXXXQVTDL*REG 673 +F F+ YM K+ V+KAL++A+ ++ P KIHE+MRYSLLAGGKR+RP+LCIA+CEL GG ES+ MP ACA+EM HTMSL+HDDLP +DNDDLRRGKPTNHKVFGE FEH+A T GVS++R+VR E QV D+ EG Sbjct: 63 SFDFKAYMIGKANSVNKALEDAVLVREPLKIHESMRYSLLAGGKRVRPMLCIAACELFGGTESVAMPSACAVEMIHTMSLMHDDLPCMDNDDLRRGKPTNHKVFGEDVAVLAGDALLAFAFEHIATATKGVSSERIVRVVGELAKCIGSEGLVAGQVVDVCSEG 226
BLAST of EY710336 vs. ExPASy Swiss-Prot
Match: GGPPS_CAPAN (Geranylgeranyl pyrophosphate synthetase, chloroplastic OS=Capsicum annuum GN=GGPS1 PE=3 SV=1) HSP 1 Score: 180.644 bits (457), Expect = 1.184e-44 Identity = 102/237 (43.04%), Postives = 133/237 (56.12%), Query Frame = 2 Query: 5 LLKNSPLNY--FKMPFMIPFPNMKPFPMKN-----NACHAENLASVKPSQGAESIMNLKPVKIALPTFQFEEYMTSKSKKVDKALDEALPMQHPEKIHEAMRYSLLAGGKRIRPVLCIASCELVGGDESLVMPMACALEMTHTMSLIHDDLPALDNDDLRRGKPTNHKVFGEPTXXXXXXXXXXXXFEHVAAKTVGVSTDRVVRAFTEXXXXXXXXXXXXXQVTDL*REGKEVILIE 694 L+ N L+Y F IP N K P N + +A+ K + E+ +P F F+ Y+T K+ V+KALDEA+ ++ P IHEAMRYSLLAGGKR+RP+LC+A+CELVGG++ M ACA+EM HTMSLIHDDLP +DNDDLRRGKPTNHK++GE FEH+ T GV+ R+V A E QV D+ G + +E Sbjct: 16 LVFNQTLSYKSFNGFMKIPLKNSKINPKLNKKRPFSPLTVSAIATTKEDERIEAAQTEEP-------FNFKIYVTEKAISVNKALDEAIIVKEPHVIHEAMRYSLLAGGKRVRPMLCLAACELVGGNQENAMAAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKIYGEDVAVLAGDSLLAFAFEHIVNSTAGVTPSRIVGAVAELAKSIGTEGLVAGQVADIKCTGNASVSLE 245
BLAST of EY710336 vs. ExPASy Swiss-Prot
Match: GGPP2_ARATH (Geranylgeranyl pyrophosphate synthetase 2 OS=Arabidopsis thaliana GN=GGPP2 PE=2 SV=2) HSP 1 Score: 175.637 bits (444), Expect = 3.807e-43 Identity = 90/173 (52.02%), Postives = 115/173 (66.47%), Query Frame = 2 Query: 182 TFQFEEYMTSKSKKVDKALDEALPMQHPEKIHEAMRYSLLAGGKRIRPVLCIASCELVGGDESLVMPMACALEMTHTMSLIHDDLPALDNDDLRRGKPTNHKVFGEPTXXXXXXXXXXXXFEHVAAKTVGVSTDRVVRAFTEXXXXXXXXXXXXXQVTDL*REGKEVILIEIG 700 TF+F+ YM SK++ V+KAL+EA+P+ P KIHEAMRY++LA GKR+RP+LC+ASCELVGG E+ MP ACA+EM HTMSLI DDLP +DNDDLRRGKPT HKV+GE FEH+ T +S++R+V A E Q D+ EG + L E+G Sbjct: 82 TFEFDPYMMSKAESVNKALEEAIPVGEPLKIHEAMRYAILAAGKRVRPILCLASCELVGGQENAAMPAACAVEMIHTMSLIKDDLPCMDNDDLRRGKPTTHKVYGEGVAILSGGALLSLAFEHMT--TAEISSERMVWAVRELARSIGTRGLVAGQAMDISSEGLD--LNEVG 250
BLAST of EY710336 vs. ExPASy Swiss-Prot
Match: GGPP4_ARATH (Geranylgeranyl pyrophosphate synthetase 4 OS=Arabidopsis thaliana GN=GGPP4 PE=2 SV=1) HSP 1 Score: 169.474 bits (428), Expect = 2.729e-41 Identity = 85/166 (51.20%), Postives = 109/166 (65.66%), Query Frame = 2 Query: 182 TFQFEEYMTSKSKKVDKALDEALPMQHPEKIHEAMRYSLLAGGKRIRPVLCIASCELVGGDESLVMPMACALEMTHTMSLIHDDLPALDNDDLRRGKPTNHKVFGEPTXXXXXXXXXXXXFEHVAAKTVGVSTDRVVRAFTEXXXXXXXXXXXXXQVTDL*REGKE 679 +F F+ YM SK++ +++ALDEA+P+ P IH+AMRY++LAGGKR+RP+LC+A+CELVGG+E L + ACA+EM HTMSLI DDLP +DNDDLRRGKPT HKVFGE FEH+ VS+ ++VRA E Q DL EG E Sbjct: 78 SFDFKPYMISKAETINRALDEAIPLIEPLNIHKAMRYAILAGGKRVRPILCLAACELVGGEERLAIQAACAVEMIHTMSLIKDDLPCMDNDDLRRGKPTTHKVFGESVAILSGGALLALAFEHLT--EADVSSKKMVRAVKELAKSIGTKGLVAGQAKDLSSEGLE 241
BLAST of EY710336 vs. ExPASy Swiss-Prot
Match: GGPP3_ARATH (Geranylgeranyl pyrophosphate synthetase 3, chloroplastic OS=Arabidopsis thaliana GN=GGPP3 PE=2 SV=1) HSP 1 Score: 160.614 bits (405), Expect = 1.267e-38 Identity = 81/160 (50.62%), Postives = 104/160 (65.00%), Query Frame = 2 Query: 185 FQFEEYMTSKSKKVDKALDEALPMQHPEKIHEAMRYSLLAGGKRIRPVLCIASCELVGGDESLVMPMACALEMTHTMSLIHDDLPALDNDDLRRGKPTNHKVFGEPTXXXXXXXXXXXXFEHVAAKTVG-VSTDRVVRAFTEXXXXXXXXXXXXXQVTDL 661 F F+ YM K++ V+ ALD ++P++ P + EA+RYSLLAGGKR+RP+LCIA CELVGGDE+ M ACA+EM HT SLIHDDLP +DN DLRRGKPTNHKV+GE FEH+ + G V+ +R++RA E Q+ DL Sbjct: 64 FDFKLYMIRKAESVNAALDVSVPLREPLTVQEAVRYSLLAGGKRVRPLLCIAVCELVGGDEATAMSAACAVEMIHTSSLIHDDLPCMDNADLRRGKPTNHKVYGEDMAVLAGDALLALAFEHMTVVSSGLVAPERMIRAVVELARAIGTTGLVAGQMIDL 223
BLAST of EY710336 vs. ExPASy Swiss-Prot
Match: CRTE_CYAPA (Geranylgeranyl pyrophosphate synthetase homolog OS=Cyanophora paradoxa GN=crtE PE=3 SV=1) HSP 1 Score: 152.14 bits (383), Expect = 4.508e-36 Identity = 77/183 (42.08%), Postives = 107/183 (58.47%), Query Frame = 2 Query: 155 LKPVKIALPTFQFEEYMTSKSKKVDKALDEALPMQHPEKIHEAMRYSLLAGGKRIRPVLCIASCELVGGDESLVMPMACALEMTHTMSLIHDDLPALDNDDLRRGKPTNHKVFGEPTXXXXXXXXXXXXFEHVAAKTVGVSTDRVVRAFTEXXXXXXXXXXXXXQVTDL*REGKEVILIEIGN 703 +KP++ F Y+ + + V+ L++++P +P I++++RYSL AGGKRIRP+LC+ASCEL GG + +P ACALEM HTMSLIHDDLPA+DND RRGKPTNH ++GE FE +A +T V D +V+ + Q+ DL EGK +E N Sbjct: 1 MKPLQT---NFNLLTYLYERKEIVEDTLNKSIPRGNPTFIYDSIRYSLSAGGKRIRPILCLASCELAGGTMEMALPTACALEMIHTMSLIHDDLPAMDNDSYRRGKPTNHIIYGEDLAILAGDALLAYAFEFIATQTKNVPADLIVKVIAQVAHSVTTSGLVGGQIIDLSSEGKSDTTLETLN 180
BLAST of EY710336 vs. ExPASy Swiss-Prot
Match: GGPP6_ARATH (Geranylgeranyl pyrophosphate synthetase 6, mitochondrial OS=Arabidopsis thaliana GN=GGPP6 PE=2 SV=2) HSP 1 Score: 149.443 bits (376), Expect = 2.922e-35 Identity = 80/179 (44.69%), Postives = 107/179 (59.78%), Query Frame = 2 Query: 152 NLKPVKIALPTFQFEEYMTSKSKKVDKALDEALPM--------QHPEKIHEAMRYSLLAGGKRIRPVLCIASCELVGGDESLVMPMACALEMTHTMSLIHDDLPALDNDDLRRGKPTNHKVFGEPTXXXXXXXXXXXXFEHVAAKT-VGVSTDRVVRAFTEXXXXXXXXXXXXXQVTDL 661 N + IA +F YM +K+K ++KALD ++P+ + ++H+AMRY+LL GGKR+RP+LC+ +CELVGG ES MP ACA+EM H SLI DDLP +D+D LRRGKPTNHKVFGE T + A T +GV+++RV+RA E Q DL Sbjct: 19 NRRLSSIASSDSEFISYMKNKAKSINKALDNSIPLCNNFVPLWEPVLEVHKAMRYTLLPGGKRVRPMLCLVACELVGGQESTAMPAACAVEMIHAASLILDDLPCMDDDSLRRGKPTNHKVFGEKTSILASNALRSLAVKQTLASTSLGVTSERVLRAVQEMARAVGTEGLVAGQAADL 197 The following BLAST results are available for this feature:
BLAST of EY710336 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 30
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Sequences
The
following sequences are available for this feature:
EST sequence >EY710336 ID=EY710336; Name=EY710336; organism=Citrus sinensis; type=EST; length=986bpback to top |