EY685038

Overview
NameEY685038
Unique NameEY685038
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length544
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig6157 contig Csv1_Contig6157:465..990. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY685038 vs. ExPASy Swiss-Prot
Match: RL15B_PICMA (60S ribosomal protein L15-2 OS=Picea mariana GN=SB62 PE=2 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 2.416e-29
Identity = 57/66 (86.36%), Postives = 61/66 (92.42%), Query Frame = 1
Query:    7 VRLVDPAHNAIRNDPRINWLCNPVHKHRELRGLTSAGKKYRGLRGKGHLHHKARPSRRATWKRNNT 204
            V LVD AH  IRNDPRINW+CN VHKHRELRGLTSAGKKYRGLRG+GHL+HKARPS+RATWKRNNT
Sbjct:  132 VVLVDQAHTVIRNDPRINWICNAVHKHRELRGLTSAGKKYRGLRGRGHLYHKARPSKRATWKRNNT 197          
BLAST of EY685038 vs. ExPASy Swiss-Prot
Match: RL15A_PICMA (60S ribosomal protein L15-1 OS=Picea mariana GN=SB61 PE=2 SV=1)

HSP 1 Score: 127.487 bits (319), Expect = 4.120e-29
Identity = 56/64 (87.50%), Postives = 61/64 (95.31%), Query Frame = 1
Query:   13 LVDPAHNAIRNDPRINWLCNPVHKHRELRGLTSAGKKYRGLRGKGHLHHKARPSRRATWKRNNT 204
            LVD AH+AIR DPRINW+CN VHKHRELRGLTSAGKKYRGLRG+GHL+HKARPS+RATWKRNNT
Sbjct:  134 LVDQAHSAIRKDPRINWICNAVHKHRELRGLTSAGKKYRGLRGRGHLYHKARPSKRATWKRNNT 197          
BLAST of EY685038 vs. ExPASy Swiss-Prot
Match: RL152_ARATH (60S ribosomal protein L15-2 OS=Arabidopsis thaliana GN=RPL15B PE=2 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 9.179e-29
Identity = 55/64 (85.94%), Postives = 60/64 (93.75%), Query Frame = 1
Query:   13 LVDPAHNAIRNDPRINWLCNPVHKHRELRGLTSAGKKYRGLRGKGHLHHKARPSRRATWKRNNT 204
            LVDPAHNA+RNDPRINW+CNPVHKHRELRGLTS GKK RGLRGKGH +HK RPSRRATWK+NN+
Sbjct:  134 LVDPAHNAVRNDPRINWICNPVHKHRELRGLTSEGKKNRGLRGKGHNNHKNRPSRRATWKKNNS 197          
BLAST of EY685038 vs. ExPASy Swiss-Prot
Match: RL151_ARATH (60S ribosomal protein L15-1 OS=Arabidopsis thaliana GN=RPL15A PE=2 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 9.179e-29
Identity = 55/64 (85.94%), Postives = 60/64 (93.75%), Query Frame = 1
Query:   13 LVDPAHNAIRNDPRINWLCNPVHKHRELRGLTSAGKKYRGLRGKGHLHHKARPSRRATWKRNNT 204
            LVDPAHNA+RNDPRINW+CNPVHKHRELRGLTS GKK RGLRGKGH +HK RPSRRATWK+NN+
Sbjct:  134 LVDPAHNAVRNDPRINWICNPVHKHRELRGLTSEGKKNRGLRGKGHNNHKNRPSRRATWKKNNS 197          
BLAST of EY685038 vs. ExPASy Swiss-Prot
Match: RL15_PETHY (60S ribosomal protein L15 OS=Petunia hybrida GN=RPL15 PE=2 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 1.199e-28
Identity = 57/66 (86.36%), Postives = 60/66 (90.91%), Query Frame = 1
Query:    7 VRLVDPAHNAIRNDPRINWLCNPVHKHRELRGLTSAGKKYRGLRGKGHLHHKARPSRRATWKRNNT 204
            V LVD AH AIRNDPRINW+CNPVHKHRELRGLTSAGKKYRGLRG+GHLH+KA PSRRA WKRN T
Sbjct:  132 VILVDQAHAAIRNDPRINWICNPVHKHRELRGLTSAGKKYRGLRGRGHLHNKAPPSRRANWKRNQT 197          
BLAST of EY685038 vs. ExPASy Swiss-Prot
Match: RL15_DICDI (60S ribosomal protein L15 OS=Dictyostelium discoideum GN=rpl15-1 PE=1 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 1.202e-20
Identity = 49/67 (73.13%), Postives = 53/67 (79.10%), Query Frame = 1
Query:    7 VRLVDPAHNAIRNDPRINWLCNPVHKHRELRGLTSAGKKYRGLRGKG-HLHHKARPSRRATWKRNNT 204
            V LVD +HNAIRNDPR NW+C PVHKHRELRGLTSAG K RGLR KG H   K RPSR+A +KR NT
Sbjct:  132 VILVDNSHNAIRNDPRYNWICKPVHKHRELRGLTSAGIKARGLRRKGTHRASKTRPSRQANYKRRNT 198          
BLAST of EY685038 vs. ExPASy Swiss-Prot
Match: RL15_NEUCR (60S ribosomal protein L15 OS=Neurospora crassa GN=rpl-15 PE=3 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 3.496e-20
Identity = 46/66 (69.70%), Postives = 51/66 (77.27%), Query Frame = 1
Query:    7 VRLVDPAHNAIRNDPRINWLCNPVHKHRELRGLTSAGKKYRGLRGKGHLHHKARPSRRATWKRNNT 204
            V LVDP H AIR DPRINW+ NPVHKHRE RGLTS GK+ RGL  KGH ++K R  RR TWKR+NT
Sbjct:  132 VILVDPQHKAIRRDPRINWIVNPVHKHRESRGLTSTGKRSRGL-NKGHRYNKTRAGRRKTWKRHNT 196          
BLAST of EY685038 vs. ExPASy Swiss-Prot
Match: RL15_ASPNG (60S ribosomal protein L15 OS=Aspergillus niger GN=rpl15 PE=2 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 1.469e-18
Identity = 43/66 (65.15%), Postives = 48/66 (72.73%), Query Frame = 1
Query:    7 VRLVDPAHNAIRNDPRINWLCNPVHKHRELRGLTSAGKKYRGLRGKGHLHHKARPSRRATWKRNNT 204
            V LVDP H AIR D RINW+CN VHKHRE RGLT+ GKK RG+  KGH ++  R  RR TWKR NT
Sbjct:  132 VILVDPQHKAIRRDARINWICNAVHKHREARGLTATGKKSRGI-NKGHRYNNTRSGRRHTWKRQNT 196          
BLAST of EY685038 vs. ExPASy Swiss-Prot
Match: RL15B_YEAST (60S ribosomal protein L15-B OS=Saccharomyces cerevisiae GN=RPL15B PE=1 SV=2)

HSP 1 Score: 91.6633 bits (226), Expect = 2.506e-18
Identity = 42/66 (63.64%), Postives = 47/66 (71.21%), Query Frame = 1
Query:    7 VRLVDPAHNAIRNDPRINWLCNPVHKHRELRGLTSAGKKYRGLRGKGHLHHKARPSRRATWKRNNT 204
            V LVDP H AIR D R NW+CNPVHKHRE RGLT+ GKK RG+  KGH  +  +  RR TWKR NT
Sbjct:  132 VILVDPQHKAIRRDARYNWICNPVHKHREARGLTATGKKSRGI-NKGHKFNNTKAGRRKTWKRQNT 196          
BLAST of EY685038 vs. ExPASy Swiss-Prot
Match: RL15_ANOGA (60S ribosomal protein L15 OS=Anopheles gambiae GN=RpL15 PE=2 SV=3)

HSP 1 Score: 90.5077 bits (223), Expect = 5.582e-18
Identity = 44/66 (66.67%), Postives = 51/66 (77.27%), Query Frame = 1
Query:    7 VRLVDPAHNAIRNDPRINWLCNPVHKHRELRGLTSAGKKYRGLRGKGHLHHKA-RPSRRATWKRNN 201
            V +VDPAHNAIR DP +NW+CN VHKHRELRGLTSAGK  RGL GKG+ + +    SRRA W+R N
Sbjct:  132 VIMVDPAHNAIRRDPNVNWICNAVHKHRELRGLTSAGKSSRGL-GKGYRYSQTIGGSRRACWRRRN 196          
The following BLAST results are available for this feature:
BLAST of EY685038 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 46
Match NameE-valueIdentityDescription
RL15B_PICMA2.416e-2986.3660S ribosomal protein L15-2 OS=Picea mariana GN=SB... [more]
RL15A_PICMA4.120e-2987.5060S ribosomal protein L15-1 OS=Picea mariana GN=SB... [more]
RL152_ARATH9.179e-2985.9460S ribosomal protein L15-2 OS=Arabidopsis thalian... [more]
RL151_ARATH9.179e-2985.9460S ribosomal protein L15-1 OS=Arabidopsis thalian... [more]
RL15_PETHY1.199e-2886.3660S ribosomal protein L15 OS=Petunia hybrida GN=RP... [more]
RL15_DICDI1.202e-2073.1360S ribosomal protein L15 OS=Dictyostelium discoid... [more]
RL15_NEUCR3.496e-2069.7060S ribosomal protein L15 OS=Neurospora crassa GN=... [more]
RL15_ASPNG1.469e-1865.1560S ribosomal protein L15 OS=Aspergillus niger GN=... [more]
RL15B_YEAST2.506e-1863.6460S ribosomal protein L15-B OS=Saccharomyces cerev... [more]
RL15_ANOGA5.582e-1866.6760S ribosomal protein L15 OS=Anopheles gambiae GN=... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C2-003-007-H09-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY685038 ID=EY685038; Name=EY685038; organism=Citrus sinensis; type=EST; length=544bp
CCACGCGTCCGCTTGGTTGATCCTGCTCATAATGCCATCCGTAATGACCC
AAGAATTAATTGGTTATGCAATCCTGTCCATAAGCACAGGGAACTCCGTG
GTCTTACTTCTGCAGGTAAGAAGTACAGAGGCCTACGTGGAAAAGGACAC
TTGCACCACAAGGCTCGGCCTTCGCGCAGGGCTACCTGGAAGAGAAACAA
TACTCTTTCCCTCCGTCGCTACCGTTGATCATTGTTACGGTTTTGATGTT
TATCATCAGTTGAGGGATTTTGTCTGGAGGACATAGTAGTTGCCATTTTG
AGTCTTTTAGAGATTGAAATACTATGGAACATATCTTATTTTGAAACCGT
ACATTCTAAATTAAGACATTTGTGTTTCTTGAGTCTACCTTGAATTATAA
GAGCCTTAAATGTCTCATTCTGTTTAAGGTCTTGTTGAGTATTTGTTTCG
TCACTGCTGTGATTTATCACCTCTTGAACTAGCAGATTTTAAGTTTTGGC
TCGNCAAAAGGAAATCAAATATAAAAAAGAAAAAAAATGGACAG
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