EY710284

Overview
NameEY710284
Unique NameEY710284
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1011
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY710284 vs. ExPASy Swiss-Prot
Match: SC24A_ARATH (Protein transport protein Sec24-like At3g07100 OS=Arabidopsis thaliana GN=At3g07100 PE=1 SV=2)

HSP 1 Score: 153.295 bits (386), Expect = 2.100e-36
Identity = 71/103 (68.93%), Postives = 90/103 (87.38%), Query Frame = 2 
Query:   59 VLWFGRMLSPDIAMNLLGSEFAAELSKVTLREQDNEMSRKLLGILKKLKEQDPSYYQLCQLVRHGEPPREGFLLLANLVEDQIGGSNGYAE*IMQIHRQVRQN 367
            VLWFGRMLSPDIA NLLG +FAA+LS+VT +EQ+N MS+KL+ ++KKL+E DPSY+ +C LVR GE PREGFLLL NL+EDQ+GGS+GY + I+Q+HRQV+QN
Sbjct:  936 VLWFGRMLSPDIAKNLLGVDFAADLSRVTFQEQENGMSKKLMRLVKKLRESDPSYHPMCFLVRQGEQPREGFLLLRNLIEDQMGGSSGYVDWILQLHRQVQQN 1038
The following BLAST results are available for this feature:
BLAST of EY710284 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
SC24A_ARATH2.100e-3668.93Protein transport protein Sec24-like At3g07100 OS=... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C3-701-097-A12-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY710284 ID=EY710284; Name=EY710284; organism=Citrus sinensis; type=EST; length=1011bp
GTGGGAATTCCCGGGGGTCGACCCACGCGTCCGATATTTGATGACGGTTT
CCGTTTTTGTTTTGTGGTTCGGTAGAATGCTCTCTCCTGATATAGCTATG
AATTTGCTTGGCTCAGAGTTTGCGGCTGAGTTATCAAAGGTTACGCTTAG
AGAGCAAGATAATGAAATGTCTAGGAAGCTATTGGGGATCCTGAAGAAGC
TTAAAGAGCAAGATCCTTCCTATTATCAGCTGTGTCAACTTGTAAGACAT
GGTGAACCGCCCAGAGAAGGTTTCCTTCTTCTTGCGAACCTTGTAGAGGA
CCAAATTGGGGGCTCCAATGGTTATGCAGAATGAATTATGCAGATTCATC
GCCAAGTACGGCAAAACCCATGAAATACAGGTGAAATAAGAGGCTATGAA
GTGCTACTGTAGCTTTATCATGCTAAGTTTGAAAAAATATTTGGGAAAAT
TTATGGTTATAAAAAAAATCCCACGGAACTTGCTAATCTGCTGCAAAGGA
TTATCAATAAGATTGGTCAGTACTCTTCACCAACAAATGATATAAGATAA
TGTTCCATTAAATAATTAACAATTTGATTTCGTATTATCTTTCCATATCA
TATAGTGAATGTTGAAGTTAATGAATTTAGATTACCAAACAGATTCAAGA
GAAATTAGTGCGGGTTAAATACGGTATCTATACAGAGGGGAGAGGACTTA
TGAAAGAAAAGAGTAAAAAAAGAAGTTCATATGGAAATCTGCGAGATTAC
ATTTAAAAAATACGAAATAAAAATGAAAGATATTTATAAGAGATAGGTAA
GTATATAAAAAATAGTGAAGTGGCATACGATAAAAAAAACTAAGGTTGAG
GTATCCATACACTCTTGCGACCATTTAAATTCTGAGAGTACTTAAAATTC
TGAAAGGAAACTGAATTTAATAATGAATCACAATAGTCCCTTACTCCTGC
AATATTCGAAGACTAATAAGTATTTTGTACAATGCAAACTTTCAAAAAGA
TTGATTGATCA
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