EY710283

Overview
NameEY710283
Unique NameEY710283
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1056
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
EY710283_ssr81 microsatellite EY710283_ssr81:81..92. BLAST: Citrus ESTs to Prunus persica proteins V1
Homology
BLAST of EY710283 vs. ExPASy Swiss-Prot
Match: P2C60_ARATH (Probable protein phosphatase 2C 60 OS=Arabidopsis thaliana GN=At4g31860 PE=2 SV=1)

HSP 1 Score: 287.345 bits (734), Expect = 9.872e-77
Identity = 139/162 (85.80%), Postives = 152/162 (93.83%), Query Frame = 2
Query:    2 VQKAFFRMDEMMKGQRGWRELAVLGDKINKFTGMIEGLIWSPRGGDSNDQPNDWAFEEGPHSDFAGPTSGSTACVAIIRNNHLIVANAGDSRCVISRKGQAYNLSRDHKPDLEAEKERILKAGGFIHAGRVNGSLNLARAIGDMEFKQNKFLSAEKAKLVTA 487
            +QKAFFRMDEMM+GQRGWRELAVLGDKINKF+GMIEGLIWSPR GDS ++P+ WAFEEGPHSDFAGP SGSTACVA++R+  L VANAGDSRCVISRK QAYNLSRDHKPDLEAEKERILKAGGFIHAGRVNGSLNL+RAIGDMEFKQNKFL +EK ++VTA
Sbjct:   91 LQKAFFRMDEMMQGQRGWRELAVLGDKINKFSGMIEGLIWSPRSGDSANKPDAWAFEEGPHSDFAGPNSGSTACVAVVRDKQLFVANAGDSRCVISRKNQAYNLSRDHKPDLEAEKERILKAGGFIHAGRVNGSLNLSRAIGDMEFKQNKFLPSEK-QIVTA 251          
BLAST of EY710283 vs. ExPASy Swiss-Prot
Match: P2C58_ORYSJ (Probable protein phosphatase 2C 58 OS=Oryza sativa subsp. japonica GN=Os06g0651600 PE=2 SV=1)

HSP 1 Score: 275.404 bits (703), Expect = 3.882e-73
Identity = 129/157 (82.17%), Postives = 144/157 (91.72%), Query Frame = 2
Query:    8 KAFFRMDEMMKGQRGWRELAVLGDKINKFTGMIEGLIWSPRGGDSNDQPNDWAFEEGPHSDFAGPTSGSTACVAIIRNNHLIVANAGDSRCVISRKGQAYNLSRDHKPDLEAEKERILKAGGFIHAGRVNGSLNLARAIGDMEFKQNKFLSAEKAKL 478
            KAFFRMDEMM+GQRGWREL  LGDKIN+ +GMIEGLIWSPRG DSNDQ +DWAFEEGPHSDFAGPT GSTACVAI+RN+ L+VANAGDSRCVISR GQAYNLSRDHKP+LEAE+ERILKAGG+I  GRVNG++NL+RAIGD+EFKQNKFLS +K  L
Sbjct:   93 KAFFRMDEMMRGQRGWRELQALGDKINQISGMIEGLIWSPRGSDSNDQHDDWAFEEGPHSDFAGPTCGSTACVAIVRNSQLVVANAGDSRCVISRNGQAYNLSRDHKPELEAERERILKAGGYIQMGRVNGTINLSRAIGDIEFKQNKFLSPDKQML 249          
BLAST of EY710283 vs. ExPASy Swiss-Prot
Match: P2C11_ORYSJ (Probable protein phosphatase 2C 11 OS=Oryza sativa subsp. japonica GN=Os02g0180000 PE=2 SV=1)

HSP 1 Score: 275.404 bits (703), Expect = 3.882e-73
Identity = 131/162 (80.86%), Postives = 146/162 (90.12%), Query Frame = 2
Query:    2 VQKAFFRMDEMMKGQRGWRELAVLGDKINKFTGMIEGLIWSPRGGDSNDQPNDWAFEEGPHSDFAGPTSGSTACVAIIRNNHLIVANAGDSRCVISRKGQAYNLSRDHKPDLEAEKERILKAGGFIHAGRVNGSLNLARAIGDMEFKQNKFLSAEKAKLVTA 487
            V +AFFRMDEMM+GQRGWREL+ LGDKINK  GMIEGLIWSPRG DSN+  +DW+FEEGPHSDFAGPT G TACVA+IRNN L+VANAGDSRCVISR GQAYNLSRDHKP+LEAE++RI+KAGGFIH GR+NGSLNL RAIGDMEFKQNKFL  EK ++VTA
Sbjct:   91 VHRAFFRMDEMMRGQRGWRELSALGDKINKIGGMIEGLIWSPRGSDSNNGQDDWSFEEGPHSDFAGPTCGCTACVALIRNNQLVVANAGDSRCVISRAGQAYNLSRDHKPELEAERDRIVKAGGFIHMGRINGSLNLTRAIGDMEFKQNKFLPPEK-QIVTA 251          
BLAST of EY710283 vs. ExPASy Swiss-Prot
Match: P2C21_ARATH (Probable protein phosphatase 2C 21 OS=Arabidopsis thaliana GN=PPC4-2 PE=2 SV=1)

HSP 1 Score: 273.092 bits (697), Expect = 1.927e-72
Identity = 128/162 (79.01%), Postives = 147/162 (90.74%), Query Frame = 2
Query:    2 VQKAFFRMDEMMKGQRGWRELAVLGDKINKFTGMIEGLIWSPRGGDSNDQPNDWAFEEGPHSDFAGPTSGSTACVAIIRNNHLIVANAGDSRCVISRKGQAYNLSRDHKPDLEAEKERILKAGGFIHAGRVNGSLNLARAIGDMEFKQNKFLSAEKAKLVTA 487
            +++AFFRMD+MM+GQRGWRELAVLGDK+NKF+GMIEG IWSPR GD+N+QP+ W  E+GPHSDF GPTSG TACVA+I++  L VANAGDSRCVISRK QAYNLS+DHKPDLE EKERILKAGGFIHAGR+NGSLNL RAIGDMEFKQNKFL +EK ++VTA
Sbjct:   91 LRRAFFRMDDMMQGQRGWRELAVLGDKMNKFSGMIEGFIWSPRSGDTNNQPDSWPLEDGPHSDFTGPTSGCTACVALIKDKKLFVANAGDSRCVISRKSQAYNLSKDHKPDLEVEKERILKAGGFIHAGRINGSLNLTRAIGDMEFKQNKFLPSEK-QMVTA 251          
BLAST of EY710283 vs. ExPASy Swiss-Prot
Match: P2C70_ORYSJ (Probable protein phosphatase 2C 70 OS=Oryza sativa subsp. japonica GN=Os09g0558000 PE=2 SV=2)

HSP 1 Score: 254.603 bits (649), Expect = 7.092e-67
Identity = 128/163 (78.53%), Postives = 145/163 (88.96%), Query Frame = 2
Query:    2 VQKAFFRMDEMMKGQRGWRELAVLGDKINKFTGMIEGLIWSPRGGDSNDQPNDWAFEEGPHSDFAGPTSGSTACVAIIRNNHLIVANAGDSRCVISRKGQAYNLSRDHKPDLEAEKERILKAGGFIHAGRVNGSLNLARAIGDMEFKQNKFLSAEKAKLVTAQ 490
            V K+FFRMDEMMKGQRGWRELA LGDK  KFTGM+EG+IWSP+ G+S D+P D   EEGPHS F GPTSGSTACVAIIRN+ LIVANAGDSRCV+SRKG+AY+LS+DHKPDL+AEKERIL AGGFI AGRVNGSLNLARAIGDME KQN+FL AE+ ++VTA+
Sbjct:   91 VLKSFFRMDEMMKGQRGWRELAELGDKGQKFTGMLEGIIWSPKPGES-DKPEDTWTEEGPHSHFPGPTSGSTACVAIIRNDELIVANAGDSRCVLSRKGRAYDLSKDHKPDLDAEKERILNAGGFIVAGRVNGSLNLARAIGDMELKQNEFLPAER-QIVTAE 251          
BLAST of EY710283 vs. ExPASy Swiss-Prot
Match: P2C42_ORYSJ (Probable protein phosphatase 2C 42 OS=Oryza sativa subsp. japonica GN=Os04g0500900 PE=2 SV=4)

HSP 1 Score: 104.375 bits (259), Expect = 1.185e-21
Identity = 67/168 (39.88%), Postives = 93/168 (55.36%), Query Frame = 2
Query:    2 VQKAFFRMDEMMKGQRGWRELAVLGDKINKFTGMIEGLIWSPRGGDSNDQPNDWA----FEEGPHSDFAGPTS-GSTACVAIIRNNHLIVANAGDSRCVISRKGQAYNLSRDHKPDLEAEKERILKAGGFIH----AGRVNGSLNLARAIGDMEFKQNKFLSAEKAKL 478
            ++++FFRMDEM++ Q   +EL   G   N++        W   G         W        GP   + GP + G TACV +IRN  ++V NAGD+RCVISR GQA  LS DHKP+   E +RI+ AGG +     + RVN  + ++RAIGD+ +K NK L  E+  L
Sbjct:   95 LRQSFFRMDEMLRNQAASKELTEYGSG-NEY--------WRTAG-------RSWLRCAPCVLGPV--YCGPLAEGCTACVVLIRNTQIVVGNAGDARCVISRNGQAIALSNDHKPNFPEETQRIVAAGGSVSFSRGSHRVNNGIAVSRAIGDLSYKNNKKLRPEQQLL 244          
BLAST of EY710283 vs. ExPASy Swiss-Prot
Match: P2C21_ORYSJ (Probable protein phosphatase 2C 21 OS=Oryza sativa subsp. japonica GN=Os02g0606900 PE=2 SV=2)

HSP 1 Score: 102.834 bits (255), Expect = 3.449e-21
Identity = 51/89 (57.30%), Postives = 64/89 (71.91%), Query Frame = 2
Query:  188 DFAGPT-SGSTACVAIIRNNHLIVANAGDSRCVISRKGQAYNLSRDHKPDLEAEKERILKAGGFIHAGRVNGSLNLARAIGDMEFKQNK 451
            D+  P+  GSTACV IIR N +IV N GDSRCV+S+ GQA +LS DHKP  EAE+ERI +AGG +   R+ G L  +RAIGD  +KQN+
Sbjct:  134 DYVPPSYEGSTACVVIIRGNQIIVGNVGDSRCVLSKNGQAISLSFDHKPHHEAERERIQRAGGHVFLQRILGMLATSRAIGDFAYKQNR 222          
BLAST of EY710283 vs. ExPASy Swiss-Prot
Match: PPM1G_MACFA (Protein phosphatase 1G OS=Macaca fascicularis GN=PPM1G PE=2 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 1.712e-20
Identity = 54/92 (58.70%), Postives = 66/92 (71.74%), Query Frame = 2
Query:  197 GPTSGSTACVAIIRNNHLIVANAGDSRCVISRKGQAYNLSRDHKPDLEAEKERILKAGGFIHA-GRVNGSLNLARAIGDMEFKQNKFLSAEK 469
            G  SG+TA VA+IR   LIVANAGDSRCV+S  G+A ++S DHKP+ E E  RI  AGG +   GRVNG LNL+RAIGD  +K+NK L  E+
Sbjct:  325 GSDSGTTAVVALIRGKQLIVANAGDSRCVVSEAGKALDMSYDHKPEDEVELARIKNAGGKVTMDGRVNGGLNLSRAIGDHFYKRNKNLPPEE 416          
BLAST of EY710283 vs. ExPASy Swiss-Prot
Match: PPM1G_HUMAN (Protein phosphatase 1G OS=Homo sapiens GN=PPM1G PE=1 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 1.712e-20
Identity = 54/92 (58.70%), Postives = 66/92 (71.74%), Query Frame = 2
Query:  197 GPTSGSTACVAIIRNNHLIVANAGDSRCVISRKGQAYNLSRDHKPDLEAEKERILKAGGFIHA-GRVNGSLNLARAIGDMEFKQNKFLSAEK 469
            G  SG+TA VA+IR   LIVANAGDSRCV+S  G+A ++S DHKP+ E E  RI  AGG +   GRVNG LNL+RAIGD  +K+NK L  E+
Sbjct:  324 GSDSGTTAVVALIRGKQLIVANAGDSRCVVSEAGKALDMSYDHKPEDEVELARIKNAGGKVTMDGRVNGGLNLSRAIGDHFYKRNKNLPPEE 415          
BLAST of EY710283 vs. ExPASy Swiss-Prot
Match: PPM1G_BOVIN (Protein phosphatase 1G OS=Bos taurus GN=PPM1G PE=2 SV=2)

HSP 1 Score: 100.523 bits (249), Expect = 1.712e-20
Identity = 54/92 (58.70%), Postives = 66/92 (71.74%), Query Frame = 2
Query:  197 GPTSGSTACVAIIRNNHLIVANAGDSRCVISRKGQAYNLSRDHKPDLEAEKERILKAGGFIHA-GRVNGSLNLARAIGDMEFKQNKFLSAEK 469
            G  SG+TA VA+IR   LIVANAGDSRCV+S  G+A ++S DHKP+ E E  RI  AGG +   GRVNG LNL+RAIGD  +K+NK L  E+
Sbjct:  322 GSDSGTTAVVALIRGKQLIVANAGDSRCVVSEAGKALDMSYDHKPEDEVELARIKNAGGKVTMDGRVNGGLNLSRAIGDHFYKRNKNLPPEE 413          
The following BLAST results are available for this feature:
BLAST of EY710283 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 89
Match NameE-valueIdentityDescription
P2C60_ARATH9.872e-7785.80Probable protein phosphatase 2C 60 OS=Arabidopsis ... [more]
P2C58_ORYSJ3.882e-7382.17Probable protein phosphatase 2C 58 OS=Oryza sativa... [more]
P2C11_ORYSJ3.882e-7380.86Probable protein phosphatase 2C 11 OS=Oryza sativa... [more]
P2C21_ARATH1.927e-7279.01Probable protein phosphatase 2C 21 OS=Arabidopsis ... [more]
P2C70_ORYSJ7.092e-6778.53Probable protein phosphatase 2C 70 OS=Oryza sativa... [more]
P2C42_ORYSJ1.185e-2139.88Probable protein phosphatase 2C 42 OS=Oryza sativa... [more]
P2C21_ORYSJ3.449e-2157.30Probable protein phosphatase 2C 21 OS=Oryza sativa... [more]
PPM1G_MACFA1.712e-2058.70Protein phosphatase 1G OS=Macaca fascicularis GN=P... [more]
PPM1G_HUMAN1.712e-2058.70Protein phosphatase 1G OS=Homo sapiens GN=PPM1G PE... [more]
PPM1G_BOVIN1.712e-2058.70Protein phosphatase 1G OS=Bos taurus GN=PPM1G PE=2... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-701-097-A11-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY710283 ID=EY710283; Name=EY710283; organism=Citrus sinensis; type=EST; length=1056bp
CGTTCAGAAAGCTTTTTTCAGGATGGATGAGATGATGAAGGGACAAAGAG
GATGGAGAGAATTAGCTGTTTTGGGAGATAAAATAAATAAATTCACTGGC
ATGATAGAAGGGTTGATATGGTCTCCAAGGGGTGGTGATAGTAATGATCA
ACCTAATGATTGGGCTTTTGAGGAGGGCCCTCACTCTGATTTTGCTGGAC
CAACTTCTGGAAGCACAGCCTGTGTTGCAATTATCAGAAACAATCATCTC
ATTGTTGCAAATGCTGGTGATTCTCGATGCGTGATATCTAGAAAGGGCCA
GGCATATAATCTCTCAAGAGATCACAAACCAGATCTTGAAGCTGAGAAAG
AAAGGATATTGAAAGCTGGTGGATTTATACATGCAGGACGAGTCAATGGT
AGTTTGAATCTTGCAAGAGCAATAGGTGACATGGAATTCAAGCAGAACAA
ATTTTTGTCTGCTGAAAAAGCAAAATTGGTTACTGCCCAATCCAAATATA
AACTCTGTTGAACTGTGTGATGAATGATGATTTTCGTTGGTGCTGGCGTG
GTGATGGGATCCGGGGAATTGCATGTCCAGCCCGCAATTTAGTAAAATTT
TTATTCCTGAACAACTTCCTTTCCGGAAAAAGCAAGATTTTTCTGGCTGG
TGTTGCCAAAAAATTACTCCAGAAAAAGTTTTGGCCCCCATCCACCCGCC
TGGAGGGGGGAAGGGATGGGGCAACCTTGACCATGAATCAAAAGTGGCAG
TTCAAGAAAAACCCAATCCCAGTCCCCCTTTCCCCCCCTTTTAAGTACAA
ACTTTCCCTTGGGAATTTTCAAACCAAAATGACTCTCATTCCCCCTCACC
CCCGAAAAAAATGGAAATACAAGAATTTGCCCCCCGGTATAAAGGTAACC
CCCCATTATGACCAGGGGGTCCCACCAATTATTCTGGGGTATCCCTCTTT
TCCCCCCAAATAAAAAAAAAGATTGAAAAAAAAAAACCCCCTCTTTTTTT
TATGAATTAAAAAAAAAAAATTGATGAGAATAATAACAAAAAAAAAATGA
CGTGTG
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