EY710279

Overview
NameEY710279
Unique NameEY710279
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1003
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY710279 vs. ExPASy Swiss-Prot
Match: PSL4_HUMAN (Signal peptide peptidase-like 3 OS=Homo sapiens GN=SPPL3 PE=2 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 4.976e-22
Identity = 69/194 (35.57%), Postives = 98/194 (50.52%), Query Frame = 1
Query:   10 LGIAICIAFVSHVRLPNIKICAMLLVCLFVYDIFWVFFSERFFGANVMVSVATQQASNPVHTVANSLSL-PGLQLITKKLELPVKIVFPRNLFGGVTPGGNATDFXXXXXXXXXXXXXXXXXVLCFDHRK---SSNTVSLFDLHSSKGH----KYIWYALPGYAIGLVTALSAGVLTHSPQPALLYLVPSTLGP 567
            L + +C+A ++ VRLP++K+  +LL  L +YD+FWVFFS   F +NVMV VATQ A NP+  ++  L L P +     +L LP K+VFP +           + F                 VL +D+ K   S ++       +  G      Y    L GY +GL+TA  A  +  + QPALLYLVP TL P
Sbjct:  170 LAMGLCVAMIAFVRLPSLKVSCLLLSGLLIYDVFWVFFSAYIFNSNVMVKVATQPADNPLDVLSRKLHLGPNVGRDVPRLSLPGKLVFPSS---------TGSHFSMLGIGDIVMPGLLLCFVLRYDNYKKQASGDSCGAPGPANISGRMQKVSYFHCTLIGYFVGLLTATVASRIHRAAQPALLYLVPFTLLP 354          
BLAST of EY710279 vs. ExPASy Swiss-Prot
Match: PSL4_MOUSE (Signal peptide peptidase-like 3 OS=Mus musculus GN=Sppl3 PE=2 SV=2)

HSP 1 Score: 102.834 bits (255), Expect = 3.226e-21
Identity = 68/194 (35.05%), Postives = 97/194 (50.00%), Query Frame = 1
Query:   10 LGIAICIAFVSHVRLPNIKICAMLLVCLFVYDIFWVFFSERFFGANVMVSVATQQASNPVHTVANSLSL-PGLQLITKKLELPVKIVFPRNLFGGVTPGGNATDFXXXXXXXXXXXXXXXXXVLCFDHRK---SSNTVSLFDLHSSKGH----KYIWYALPGYAIGLVTALSAGVLTHSPQPALLYLVPSTLGP 567
            L + +C+A ++  RLP++K+  +LL  L +YD+FWVFFS   F +NVMV VATQ A NP+  ++  L L P +     +L LP K+VFP +           + F                 VL +D+ K   S ++       +  G      Y    L GY +GL+TA  A  +  + QPALLYLVP TL P
Sbjct:  169 LAMGLCVAMIAFDRLPSLKVSCLLLSGLLIYDVFWVFFSAYIFNSNVMVKVATQPADNPLDVLSKKLHLGPNVGRDVPRLSLPGKLVFPSS---------TGSHFSMLGIGDIVMPGLLLCFVLRYDNYKKQASGDSCGAPGPANISGRMQKVSYFHCTLIGYFVGLLTATVASRIHRAAQPALLYLVPFTLLP 353          
BLAST of EY710279 vs. ExPASy Swiss-Prot
Match: HM13_MOUSE (Minor histocompatibility antigen H13 OS=Mus musculus GN=Hm13 PE=1 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 1.358e-11
Identity = 59/189 (31.22%), Postives = 80/189 (42.33%), Query Frame = 1
Query:    1 NNLLGIAICIAFVSHVRLPNIKICAMLLVCLFVYDIFWVFFSERFFGANVMVSVATQQASNPVHTVANSLSLPGLQLITKKLELPVKIVFPRNLFGGVTPGGNATDFXXXXXXXXXXXXXXXXXVLCFDHRKSSNTVSLFDLHSSKGHKYIWYALPGYAIGL-VTALSAGVLTHSPQPALLYLVPSTLG 564
            NNL G+A  +  V  + L N+    +LL  LF+YDIFWV      FG NVMV+VA                        K  E P+K+VFP++L   +  G  A +F                 +L FD     NT           H Y + +   Y  GL +T     +  H+ QPALLYLVP+ +G
Sbjct:  185 NNLFGLAFSLNGVELLHLNNVSTGCILLGGLFIYDIFWV------FGTNVMVTVA------------------------KSFEAPIKLVFPQDL---LEKGLEADNFAMLGLGDIVIPGIFIALLLRFDISLKKNT-----------HTYFYTSFAAYIFGLGLTIFIMHIFKHA-QPALLYLVPACIG 328          
BLAST of EY710279 vs. ExPASy Swiss-Prot
Match: HM13_HUMAN (Minor histocompatibility antigen H13 OS=Homo sapiens GN=HM13 PE=1 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 1.358e-11
Identity = 58/189 (30.69%), Postives = 80/189 (42.33%), Query Frame = 1
Query:    1 NNLLGIAICIAFVSHVRLPNIKICAMLLVCLFVYDIFWVFFSERFFGANVMVSVATQQASNPVHTVANSLSLPGLQLITKKLELPVKIVFPRNLFGGVTPGGNATDFXXXXXXXXXXXXXXXXXVLCFDHRKSSNTVSLFDLHSSKGHKYIWYALPGYAIGL-VTALSAGVLTHSPQPALLYLVPSTLG 564
            NNL G+A  +  V  + L N+    +LL  LF+YD+FWV      FG NVMV+VA                        K  E P+K+VFP++L   +  G  A +F                 +L FD     NT           H Y + +   Y  GL +T     +  H+ QPALLYLVP+ +G
Sbjct:  185 NNLFGLAFSLNGVELLHLNNVSTGCILLGGLFIYDVFWV------FGTNVMVTVA------------------------KSFEAPIKLVFPQDL---LEKGLEANNFAMLGLGDVVIPGIFIALLLRFDISLKKNT-----------HTYFYTSFAAYIFGLGLTIFIMHIFKHA-QPALLYLVPACIG 328          
The following BLAST results are available for this feature:
BLAST of EY710279 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 4
Match NameE-valueIdentityDescription
PSL4_HUMAN4.976e-2235.57Signal peptide peptidase-like 3 OS=Homo sapiens GN... [more]
PSL4_MOUSE3.226e-2135.05Signal peptide peptidase-like 3 OS=Mus musculus GN... [more]
HM13_MOUSE1.358e-1131.22Minor histocompatibility antigen H13 OS=Mus muscul... [more]
HM13_HUMAN1.358e-1130.69Minor histocompatibility antigen H13 OS=Homo sapie... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C3-701-097-A07-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY710279 ID=EY710279; Name=EY710279; organism=Citrus sinensis; type=EST; length=1003bp
AACAACTTGTTGGGAATTGCAATCTGTATTGCATTTGTGAGCCATGTGCG
CCTTCCAAACATCAAAATATGTGCGATGCTCCTTGTATGTTTATTCGTAT
ATGACATATTCTGGGTTTTCTTCTCAGAGAGATTTTTTGGGGCAAATGTC
ATGGTATCAGTAGCAACACAACAGGCATCAAATCCCGTTCACACAGTGGC
TAATAGTTTGAGCCTTCCAGGGTTGCAACTAATAACGAAGAAGCTGGAAT
TGCCAGTCAAAATTGTATTTCCCAGGAACTTGTTTGGTGGAGTGACTCCT
GGAGGAAATGCCACAGACTTCATGATGCTTGGTCTTGGTGACATGGCAAT
GCCTGCCATGCTTTTAGCATTGGTCCTCTGCTTCGATCATCGAAAGAGCA
GCAATACAGTTAGTCTTTTTGATTTACATTCTTCAAAAGGGCACAAATAC
ATATGGTATGCCCTTCCAGGATATGCCATTGGACTCGTAACTGCTTTATC
TGCCGGAGTTTTGACTCACTCACCTCAACCTGCCCTTCTTTATCTGGTGC
CTTCTACTTTGGGACCCCGTAATTTGTATGTCGGGGGTGAGGAAGGACCT
AAAACAATTATGGGGAAAGAACCTTGTCAAATTATCAATGGATAAATCCT
CATCCAAATAGAAATCCTAAACATTTTTATTTATTTTGGGTTCATTGCCC
CAGAAAAAACTTTTTTAAAGCCAATTGAAAGTTGGAAATTTTGAATGGGA
AAAATTCTGCCCCTTGAAAAACCGGGGGGGGGGAATTTGAAAAATTTCTT
CAAAAAATTTAACCCCCGGGGGAACCTTCCTTTTCAAAATTGGGGTGAAA
AAATAAAAAAAAAAAAATTAAAAAATTTTTTTTTTTGAATTTTTTTTTTG
GGTGTGGGGAAAATTTTTTTTCTCAAAAAAAAAAAAAAAAAAAAAAAAAA
TTTTTTTTTTTTCTTTCACAAAAAAAAAAAAAAAAAAAAAAAAAAGAAAA
GGG
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