EY710276

Overview
NameEY710276
Unique NameEY710276
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1119
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY710276 vs. ExPASy Swiss-Prot
Match: Y3627_ARATH (VHS domain-containing protein At3g16270 OS=Arabidopsis thaliana GN=At3g16270 PE=1 SV=1)

HSP 1 Score: 134.42 bits (337), Expect = 1.161e-30
Identity = 67/114 (58.77%), Postives = 81/114 (71.05%), Query Frame = 1 
Query:  175 FYLEAARAQEPRCQAEGTETDKYSVGKSGTDFRREMQRHSAVVRQLFHYKGQLDPLKGDALNKAVRDMAHEAISAIFSEENKPAPVEDLSLNKRIQGFGNTNF*MPSEEQNHFL 516
            F L+    + P  + +     KY+VGKSG++FRREMQR+S  VR LFHYKG  DPLKGDALNKAVR+ AHE ISAIFSEEN   P    S+N+RI+GFGNTNF +PS +   FL
Sbjct:   54 FILKRLDNKSPIVKQKALRLIKYAVGKSGSEFRREMQRNSVAVRNLFHYKGHPDPLKGDALNKAVRETAHETISAIFSEENGTKPAAPESINRRIEGFGNTNFQVPSNDNKSFL 167

HSP 2 Score: 119.013 bits (297), Expect = 5.028e-26
Identity = 59/76 (77.63%), Postives = 65/76 (85.53%), Query Frame = 2 
Query:   26 SKSXXESYWRSRMIDGATSDEDKVTPVYKLEEICELLRSSHVSIVKEVSDFILKRLEHKSPVVKQKALRLINIQWG 253
            S+   ESYWRSRMID  TSDEDKV PVYKLEEIC+LLRSSHVSIVKE S+FILKRL++KSP+VKQKALRLI    G
Sbjct:    4 SRRAVESYWRSRMIDAVTSDEDKVAPVYKLEEICDLLRSSHVSIVKEFSEFILKRLDNKSPIVKQKALRLIKYAVG 79
The following BLAST results are available for this feature:
BLAST of EY710276 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
Y3627_ARATH1.161e-3058.77VHS domain-containing protein At3g16270 OS=Arabido... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C3-701-097-A04-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY710276 ID=EY710276; Name=EY710276; organism=Citrus sinensis; type=EST; length=1119bp
CCGNNGGTCGACCCACGCGTCCNGGTCGAAGAGCNGTNNGGAGTCGTATT
GGAGATCGAGGATGATCGATGGTGCCACGTCTGATGAAGACAAGGTGACG
CCTGTGTATAAATTGGAAGAAATTTGTGAGCTTTTGAGATCATCTCATGT
GAGTATCGTCAAGGAGGTCTCTGATTTTATCTTGAAGCGGCTCGAGCACA
AGAGCCCCGTTGTCAAGCAGAAGGCACTGAGACTGATAAATATTCAGTGG
GGAAGTCTGGTACCGATTTCAGGAGGGAAATGCAAAGACATTCAGCAGTT
GTGCGTCAGTTGTTTCATTACAAGGGGCAGTTGGATCCATTAAAGGGGGA
TGCACTGAACAAGGCTGTGCGGGACATGGCTCATGAAGCTATATCTGCTA
TCTTTTCTGAGGAAAATAAGCCAGCACCTGTAGAAGACCTTAGTCTTAAC
AAACGAATACAAGGATTCGGGAATACAAACTTTTGAATGCCATCAGAAGA
ACAGAATCATTTCTTAGTGAGGTGGTGGCCTGNGCAGTGCTCTATCAAGC
GGGACTCAGTAGTTTGCTCAGGCAATCAATGAAAAGAATGAAATGAGAGT
ATAGAGTCCAATCTTCGAAGTCGTTACAATAGAGATGATTATCNATNAAT
TGAGCCGGTGATTACGCATTGAACCAGGGTGGTATGAATTCCAAAATTGG
GCAAGTGATCTTGAACAAGATTCAGGTTATAAAAAAACGGTAATTGGGAC
TCATGGCATATACTGGAGTAAACTGGAAGAATTTTGGAACATTGGCTTTG
GGGTGCTTCCACCATCGATGGCATCAGTTTCTGCAAGTGTATGGGGCTCG
TTAATCGGCTTAAAAATCATCCATGGGGGTCAAGACTATGGCTTAGCATT
AGAAGGAGAANTTCATATTGTTTTTGGAATGTGTTTGATGTCATCCCTCT
TCTAGGAGCAAGTTTGCCCTGGAGGAGGGGGTGGTACAGGATAAAAATTT
GTTCGCTTAACCGTNAAATAAAAATCCACATAATTAGTCTCTCCTCTTAT
TTCGCGGGCCAAAAACCCTATTTCGAGGGATATTTTGTGCGGCCACAGAA
AATAGTATACTCGATAATC
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