EY710274

Overview
NameEY710274
Unique NameEY710274
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1036
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY710274 vs. ExPASy Swiss-Prot
Match: EXPA5_ARATH (Expansin-A5 OS=Arabidopsis thaliana GN=EXPA5 PE=2 SV=1)

HSP 1 Score: 204.527 bits (519), Expect = 5.415e-55
Identity = 92/157 (58.60%), Postives = 112/157 (71.34%), Query Frame = 3
Query:   72 GGWINAHATFYXXXXXXXXXXXXXXYGNLYSQXXXXXXXXXXXXXXXXXXSCGACFQIMCANDPQWCLRG-SIIVTATNFCPPGGWCDPPNHHFDLSQPVFQHIAQYRAGNVPVIYRRVKCKINGGNKFTINGHSYFNLILITNVGRASEVRAASIK 539
            G WINAHATFY              YGNLYSQ                  SCGACF++MC NDPQWC++G SI+VTATNFCPPGG CDPPNHHFDLSQP+++ IA Y++G +PV+YRRV+CK +GG +FTINGHSYFNL+L+TNVG A +V + S+K
Sbjct:   36 GPWINAHATFYGGGDASGTMGGACGYGNLYSQGYGLETAALSTALFDQGLSCGACFELMCVNDPQWCIKGRSIVVTATNFCPPGGACDPPNHHFDLSQPIYEKIALYKSGIIPVMYRRVRCKRSGGIRFTINGHSYFNLVLVTNVGGAGDVHSVSMK 192          

HSP 2 Score: 32.3426 bits (72), Expect = 5.415e-55
Identity = 19/57 (33.33%), Postives = 28/57 (49.12%), Query Frame = 2
Query:  536 QSSRIKGQPMSKNWGQNW*THQI**TKPILDVTTEKPKG*SIK---VPPTMGI*ETY 697
            + SR K Q MS+NWGQNW ++     + +  V T   +   +     PPT    +TY
Sbjct:  192 KGSRTKWQLMSRNWGQNWQSNSYLNGQSLSFVVTTSDRRSVVSFNVAPPTWSFGQTY 248          
BLAST of EY710274 vs. ExPASy Swiss-Prot
Match: EXP10_ARATH (Expansin-A10 OS=Arabidopsis thaliana GN=EXPA10 PE=2 SV=1)

HSP 1 Score: 205.297 bits (521), Expect = 2.040e-54
Identity = 104/182 (57.14%), Postives = 120/182 (65.93%), Query Frame = 3
Query:   21 VILCVGFLSLVSSVQGYGG-WINAHATFYXXXXXXXXXXXXXXYGNLYSQXXXXXXXXXXXXXXXXXXSCGACFQIMCANDPQWCLRGSIIVTATNFCPP--------GGWCDPPNHHFDLSQPVFQHIAQYRAGNVPVIYRRVKCKINGGNKFTINGHSYFNLILITNVGRASEVRAASIK 539
            V++ VG ++  SSV GYGG WINAHATFY              YGNLYSQ                  SCG+CF+I C ND +WCL GSI+VTATNFCPP        GGWC+PP  HFDL+QPVFQ IAQYRAG VPV YRRV C+  GG +FTINGHSYFNL+LITNVG A +V +A+IK
Sbjct:    8 VMIMVGVMA--SSVSGYGGGWINAHATFYGGGDASGTMGGACGYGNLYSQGYGTSTAALSTALFNNGLSCGSCFEIRCENDGKWCLPGSIVVTATNFCPPNNALANNNGGWCNPPLEHFDLAQPVFQRIAQYRAGIVPVSYRRVPCRRRGGIRFTINGHSYFNLVLITNVGGAGDVHSAAIK 187          

HSP 2 Score: 29.6462 bits (65), Expect = 2.040e-54
Identity = 11/18 (61.11%), Postives = 13/18 (72.22%), Query Frame = 2
Query:  536 QSSRIKGQPMSKNWGQNW 589
            + SR   Q MS+NWGQNW
Sbjct:  187 KGSRTVWQAMSRNWGQNW 204          
BLAST of EY710274 vs. ExPASy Swiss-Prot
Match: EXPA1_ARATH (Expansin-A1 OS=Arabidopsis thaliana GN=EXPA1 PE=2 SV=1)

HSP 1 Score: 202.986 bits (515), Expect = 1.001e-53
Identity = 100/175 (57.14%), Postives = 112/175 (64.00%), Query Frame = 3
Query:   45 SLVSSVQGY--GGWINAHATFYXXXXXXXXXXXXXXYGNLYSQXXXXXXXXXXXXXXXXXXSCGACFQIMCANDPQWCLRGSIIVTATNFCPP--------GGWCDPPNHHFDLSQPVFQHIAQYRAGNVPVIYRRVKCKINGGNKFTINGHSYFNLILITNVGRASEVRAASIK 539
            ++ S V GY  GGW+NAHATFY              YGNLYSQ                  SCGACF+I C ND +WCL GSI+VTATNFCPP        GGWC+PP  HFDLSQPVFQ IAQYRAG VPV YRRV C   GG +FTINGHSYFNL+LITNVG A +V +A +K
Sbjct:   14 AMTSHVNGYAGGGWVNAHATFYGGGDASGTMGGACGYGNLYSQGYGTNTAALSTALFNNGLSCGACFEIRCQNDGKWCLPGSIVVTATNFCPPNNALPNNAGGWCNPPQQHFDLSQPVFQRIAQYRAGIVPVAYRRVPCVRRGGIRFTINGHSYFNLVLITNVGGAGDVHSAMVK 188          

HSP 2 Score: 29.6462 bits (65), Expect = 1.001e-53
Identity = 11/18 (61.11%), Postives = 13/18 (72.22%), Query Frame = 2
Query:  536 QSSRIKGQPMSKNWGQNW 589
            + SR   Q MS+NWGQNW
Sbjct:  188 KGSRTGWQAMSRNWGQNW 205          
BLAST of EY710274 vs. ExPASy Swiss-Prot
Match: EXP15_ARATH (Expansin-A15 OS=Arabidopsis thaliana GN=EXPA15 PE=2 SV=2)

HSP 1 Score: 200.675 bits (509), Expect = 1.701e-53
Identity = 98/176 (55.68%), Postives = 113/176 (64.20%), Query Frame = 3
Query:   39 FLSLVSSVQGY-GGWINAHATFYXXXXXXXXXXXXXXYGNLYSQXXXXXXXXXXXXXXXXXXSCGACFQIMCANDPQWCLRGSIIVTATNFCPP--------GGWCDPPNHHFDLSQPVFQHIAQYRAGNVPVIYRRVKCKINGGNKFTINGHSYFNLILITNVGRASEVRAASIK 539
            F ++V SV GY  GW+NAHATFY              YGNLYSQ                  SCGACF+I C +D  WCL G+IIVTATNFCPP        GGWC+PP HHFDLSQPVFQ IAQY+AG VPV YRRV C   GG +FTINGHSYFNL+L+TNVG A +V + ++K
Sbjct:   16 FAAMVCSVHGYDAGWVNAHATFYGGSDASGTMGGACGYGNLYSQGYGTNTAALSTALFNNGLSCGACFEIKCQSDGAWCLPGAIIVTATNFCPPNNALPNNAGGWCNPPLHHFDLSQPVFQRIAQYKAGVVPVSYRRVPCMRRGGIRFTINGHSYFNLVLVTNVGGAGDVHSVAVK 191          

HSP 2 Score: 31.187 bits (69), Expect = 1.701e-53
Identity = 11/18 (61.11%), Postives = 14/18 (77.78%), Query Frame = 2
Query:  536 QSSRIKGQPMSKNWGQNW 589
            + SR + Q MS+NWGQNW
Sbjct:  191 KGSRTRWQQMSRNWGQNW 208          
BLAST of EY710274 vs. ExPASy Swiss-Prot
Match: EXP14_ARATH (Expansin-A14 OS=Arabidopsis thaliana GN=EXPA14 PE=2 SV=1)

HSP 1 Score: 191.43 bits (485), Expect = 8.212e-50
Identity = 94/182 (51.65%), Postives = 112/182 (61.54%), Query Frame = 3
Query:   21 VILCVGFLSLVSSVQGYG-GWINAHATFYXXXXXXXXXXXXXXYGNLYSQXXXXXXXXXXXXXXXXXXSCGACFQIMCANDPQWCLRGSIIVTATNFCPP--------GGWCDPPNHHFDLSQPVFQHIAQYRAGNVPVIYRRVKCKINGGNKFTINGHSYFNLILITNVGRASEVRAASIK 539
            + L +  + +  SV GY  GW+NA ATFY              YGNLYSQ                  SCGACFQI C +DP+WC+ G+I VT TNFCPP        GGWC+PP HHFDL+QP+F  IAQY+AG VPV YRRV C+  GG +FTINGHSYFNL+LITNV  A +V + SIK
Sbjct:    9 ISLSLMMMIMWKSVDGYSSGWVNARATFYGGADASGTMGGACGYGNLYSQGYGTNTAALSTALFNGGQSCGACFQIKCVDDPKWCIGGTITVTGTNFCPPNFAQANNAGGWCNPPQHHFDLAQPIFLRIAQYKAGVVPVQYRRVACRRKGGIRFTINGHSYFNLVLITNVAGAGDVISVSIK 190          

HSP 2 Score: 28.1054 bits (61), Expect = 8.212e-50
Identity = 9/18 (50.00%), Postives = 13/18 (72.22%), Query Frame = 2
Query:  536 QSSRIKGQPMSKNWGQNW 589
            + +  + Q MS+NWGQNW
Sbjct:  190 KGTNTRWQSMSRNWGQNW 207          
BLAST of EY710274 vs. ExPASy Swiss-Prot
Match: EXPA4_ORYSJ (Expansin-A4 OS=Oryza sativa subsp. japonica GN=EXPA4 PE=2 SV=1)

HSP 1 Score: 182.57 bits (462), Expect = 1.516e-48
Identity = 89/180 (49.44%), Postives = 110/180 (61.11%), Query Frame = 3
Query:   24 ILCVGFLSLVSSVQGYGGWINAHATFYXXXXXXXXXXXXXXYGNLYSQXXXXXXXXXXXXXXXXXXSCGACFQIMCANDPQWCLRGSIIVTATNFCPP--------GGWCDPPNHHFDLSQPVFQHIAQYRAGNVPVIYRRVKCKINGGNKFTINGHSYFNLILITNVGRASEVRAASIK 539
            +L + FL+  +S  GYGGW +AHATFY              YGNLYSQ                  +CG+C+++ C N    CL GSI VTATNFCPP        GGWC+PP  HFD+++P F HIAQYRAG VPV +RRV C   GG +FT+NGHSYFNL+L+TNV  A +VR+ SIK
Sbjct:    6 VLFLLFLARQASAAGYGGWQSAHATFYGGGDASGTMGGACGYGNLYSQGYGTNTAALSTALFNDGAACGSCYELRCDNAGSSCLPGSITVTATNFCPPNYGLPSDDGGWCNPPRPHFDMAEPAFLHIAQYRAGIVPVSFRRVPCVKKGGVRFTVNGHSYFNLVLVTNVAGAGDVRSVSIK 185          

HSP 2 Score: 32.7278 bits (73), Expect = 1.516e-48
Identity = 12/18 (66.67%), Postives = 14/18 (77.78%), Query Frame = 2
Query:  536 QSSRIKGQPMSKNWGQNW 589
            + SR   QPMS+NWGQNW
Sbjct:  185 KGSRTGWQPMSRNWGQNW 202          
BLAST of EY710274 vs. ExPASy Swiss-Prot
Match: EXPA4_ORYSI (Expansin-A4 OS=Oryza sativa subsp. indica GN=EXPA4 PE=2 SV=1)

HSP 1 Score: 182.57 bits (462), Expect = 1.516e-48
Identity = 89/180 (49.44%), Postives = 110/180 (61.11%), Query Frame = 3
Query:   24 ILCVGFLSLVSSVQGYGGWINAHATFYXXXXXXXXXXXXXXYGNLYSQXXXXXXXXXXXXXXXXXXSCGACFQIMCANDPQWCLRGSIIVTATNFCPP--------GGWCDPPNHHFDLSQPVFQHIAQYRAGNVPVIYRRVKCKINGGNKFTINGHSYFNLILITNVGRASEVRAASIK 539
            +L + FL+  +S  GYGGW +AHATFY              YGNLYSQ                  +CG+C+++ C N    CL GSI VTATNFCPP        GGWC+PP  HFD+++P F HIAQYRAG VPV +RRV C   GG +FT+NGHSYFNL+L+TNV  A +VR+ SIK
Sbjct:    6 VLFLLFLARQASAAGYGGWQSAHATFYGGGDASGTMGGACGYGNLYSQGYGTNTAALSTALFNDGAACGSCYELRCDNAGSSCLPGSITVTATNFCPPNYGLPSDDGGWCNPPRPHFDMAEPAFLHIAQYRAGIVPVSFRRVPCVKKGGVRFTVNGHSYFNLVLVTNVAGAGDVRSVSIK 185          

HSP 2 Score: 32.7278 bits (73), Expect = 1.516e-48
Identity = 12/18 (66.67%), Postives = 14/18 (77.78%), Query Frame = 2
Query:  536 QSSRIKGQPMSKNWGQNW 589
            + SR   QPMS+NWGQNW
Sbjct:  185 KGSRTGWQPMSRNWGQNW 202          
BLAST of EY710274 vs. ExPASy Swiss-Prot
Match: EXPA4_ARATH (Expansin-A4 OS=Arabidopsis thaliana GN=EXPA4 PE=1 SV=1)

HSP 1 Score: 183.341 bits (464), Expect = 6.183e-47
Identity = 90/173 (52.02%), Postives = 104/173 (60.12%), Query Frame = 3
Query:   51 VSSVQGYGGWINAHATFYXXXXXXXXXXXXXXYGNLYSQXXXXXXXXXXXXXXXXXXSCGACFQIMCANDPQWCLRGS--IIVTATNFCPP--------GGWCDPPNHHFDLSQPVFQHIAQYRAGNVPVIYRRVKCKINGGNKFTINGHSYFNLILITNVGRASEVRAASIK 539
            +  +   G W NAHATFY              YGNLYSQ                  SCGACF++ CANDPQWC  GS  I++TATNFCPP        GGWC+PP  HFDL+ PVF  IAQYRAG VPV YRRV C+  GG +FTINGH YFNL+LITNV  A ++  AS+K
Sbjct:   22 IPGIYSGGAWQNAHATFYGGSDASGTMGGACGYGNLYSQGYGTNTAALSTALFNNGMSCGACFELKCANDPQWCHSGSPSILITATNFCPPNLAQPSDNGGWCNPPREHFDLAMPVFLKIAQYRAGIVPVSYRRVPCRKRGGIRFTINGHRYFNLVLITNVAGAGDIVRASVK 194          

HSP 2 Score: 26.5646 bits (57), Expect = 6.183e-47
Identity = 9/18 (50.00%), Postives = 12/18 (66.67%), Query Frame = 2
Query:  536 QSSRIKGQPMSKNWGQNW 589
            + SR     +S+NWGQNW
Sbjct:  194 KGSRTGWMSLSRNWGQNW 211          
BLAST of EY710274 vs. ExPASy Swiss-Prot
Match: EXPA2_ORYSJ (Expansin-A2 OS=Oryza sativa subsp. japonica GN=EXPA2 PE=2 SV=2)

HSP 1 Score: 169.474 bits (428), Expect = 1.236e-44
Identity = 80/165 (48.48%), Postives = 97/165 (58.79%), Query Frame = 3
Query:   69 YGGWINAHATFYXXXXXXXXXXXXXXYGNLYSQXXXXXXXXXXXXXXXXXXSCGACFQIMCANDPQWCLRGSIIVTATNFCPP--------GGWCDPPNHHFDLSQPVFQHIAQYRAGNVPVIYRRVKCKINGGNKFTINGHSYFNLILITNVGRASEVRAASIK 539
            YG W +AHATFY              YGNLYS                   +CG+C+++ C ND QWCL GS+ VTATN CPP        GGWC+PP  HFD+++P F  I  YRAG VPV YRRV C   GG +FTINGHSYFNL+L+TNV    +V++ SIK
Sbjct:   26 YGSWQSAHATFYGGGDASGTMGGACGYGNLYSTGYGTNTAALSTVLFNDGAACGSCYELRCDNDGQWCLPGSVTVTATNLCPPNYALPNDDGGWCNPPRPHFDMAEPAFLQIGVYRAGIVPVSYRRVPCVKKGGIRFTINGHSYFNLVLVTNVAGPGDVQSVSIK 190          

HSP 2 Score: 32.7278 bits (73), Expect = 1.236e-44
Identity = 15/23 (65.22%), Postives = 16/23 (69.57%), Query Frame = 2
Query:  536 QSSRIKG-----QPMSKNWGQNW 589
            QS  IKG     QPMS+NWGQNW
Sbjct:  185 QSVSIKGSSTGWQPMSRNWGQNW 207          
BLAST of EY710274 vs. ExPASy Swiss-Prot
Match: EXPA5_ORYSJ (Expansin-A5 OS=Oryza sativa subsp. japonica GN=EXPA5 PE=2 SV=1)

HSP 1 Score: 174.096 bits (440), Expect = 3.557e-44
Identity = 86/169 (50.89%), Postives = 102/169 (60.36%), Query Frame = 3
Query:   66 GYGGWINAHATFYXXXXXXXXXXXXXXYGNLYSQXXXXXXXXXXXXXXXXXXSCGACFQIMC---ANDPQWCLRGSIIVTATNFCPP--------GGWCDPPNHHFDLSQPVFQHIAQYRAGNVPVIYRRVKCKINGGNKFTINGHSYFNLILITNVGRASEVRAASIK 539
            G GGW +AHATFY              YGNLYSQ                  SCGACF++ C         CL GS++VTATNFCPP        GGWC+PP  HFD+SQPVFQ IA ++AG VPV YRRV C+  GG +FTINGHSYFNL+L+TNVG A +V A ++K
Sbjct:   60 GGGGWSSAHATFYGGGDASGTMGGACGYGNLYSQGYGTNTAALSTALFNNGLSCGACFEVRCDAGGGGSHSCLPGSVVVTATNFCPPNNALPSDDGGWCNPPRAHFDMSQPVFQRIALFKAGIVPVSYRRVACQKKGGIRFTINGHSYFNLVLVTNVGGAGDVHAVAVK 228          

HSP 2 Score: 26.5646 bits (57), Expect = 3.557e-44
Identity = 8/11 (72.73%), Postives = 10/11 (90.91%), Query Frame = 2
Query:  557 QPMSKNWGQNW 589
            Q +S+NWGQNW
Sbjct:  236 QALSRNWGQNW 246          
The following BLAST results are available for this feature:
BLAST of EY710274 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 59
Match NameE-valueIdentityDescription
EXPA5_ARATH5.415e-5558.60Expansin-A5 OS=Arabidopsis thaliana GN=EXPA5 PE=2 ... [more]
EXP10_ARATH2.040e-5457.14Expansin-A10 OS=Arabidopsis thaliana GN=EXPA10 PE=... [more]
EXPA1_ARATH1.001e-5357.14Expansin-A1 OS=Arabidopsis thaliana GN=EXPA1 PE=2 ... [more]
EXP15_ARATH1.701e-5355.68Expansin-A15 OS=Arabidopsis thaliana GN=EXPA15 PE=... [more]
EXP14_ARATH8.212e-5051.65Expansin-A14 OS=Arabidopsis thaliana GN=EXPA14 PE=... [more]
EXPA4_ORYSJ1.516e-4849.44Expansin-A4 OS=Oryza sativa subsp. japonica GN=EXP... [more]
EXPA4_ORYSI1.516e-4849.44Expansin-A4 OS=Oryza sativa subsp. indica GN=EXPA4... [more]
EXPA4_ARATH6.183e-4752.02Expansin-A4 OS=Arabidopsis thaliana GN=EXPA4 PE=1 ... [more]
EXPA2_ORYSJ1.236e-4448.48Expansin-A2 OS=Oryza sativa subsp. japonica GN=EXP... [more]
EXPA5_ORYSJ3.557e-4450.89Expansin-A5 OS=Oryza sativa subsp. japonica GN=EXP... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-701-097-A02-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY710274 ID=EY710274; Name=EY710274; organism=Citrus sinensis; type=EST; length=1036bp
CCACGCGTCCGGCTCTTTGAGTGATTCTTTGTGTTGGGTTTCTCTCATTG
GTCTCATCCGTTCAAGGTTATGGAGGTTGGATTAATGCTCATGCAACTTT
CTATGGAGGTGGTGATGCTTCTGGCACAATGGGGGGCGCTTGTGGGTACG
GCAATTTGTACAGCCAAGGTTATGGTACTAATACCGCAGCACTTAACACT
GCTTTGTTCAACAATGGCCTAAGTTGTGGAGCTTGCTTTCAAATTATGTG
CGCTAATGACCCGCAATGGTGCCTGCGTGGCTCCATCATTGTCACTGCCA
CTAACTTTTGCCCTCCTGGAGGCTGGTGTGATCCTCCTAACCACCACTTT
GATCTCTCTCAGCCTGTCTTCCAACACATTGCCCAGTATAGAGCTGGTAA
TGTTCCTGTAATCTACAGAAGGGTGAAATGCAAGATAAATGGGGGAAATA
AGTTCACAATCAATGGTCATTCTTACTTCAATTTAATTCTAATAACAAAC
GTGGGTAGAGCTAGTGAAGTGCGTGCTGCATCCATCAAAGTTCAAGGATT
AAAGGGCAACCGATGTCAAAAAACTGGGGCCAAAACTGGTAAACACATCA
GATTTAATAGACAAAGCCAATTTTAGATGTAACCACAGAAAAGCCAAAAG
GTTGATCTATAAAAGTTCCACCTACAATGGGCATTTGAGAAACATATCAG
GAAGAAAATCAAAAATAAGGATAATTAAGTAAAGAAGCAACGCATTATAA
ATTATAATACCTCAACAAAGGGGGGGGAAATAATATCCTGATTGGCCCAT
AGGCTAAAACAATATCAAAAGAGTGCAATATATTTTATATTTAAATTAAG
AACATAGAGGTAAAAAAAAATTAAAAAATTGTTAAAAAATGACAATAAAA
GATGAGTAATGATGATAGAAGAATTTCATAACTTAAATGTGAGTAGAAGA
ATTAAACATAAATAATAAAAACATAATAAAAAACAAAATAAACAAGCTGA
TAATATATCAAACAATATGCACTCATTAAATGACCA
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