EY684893

Overview
NameEY684893
Unique NameEY684893
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length889
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY684893 vs. ExPASy Swiss-Prot
Match: ASOL_TOBAC (L-ascorbate oxidase homolog OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 1.289e-23
Identity = 49/95 (51.58%), Postives = 62/95 (65.26%), Query Frame = 2
Query:   14 FWVVGMDGGQWTSASRNQYNLRDAVARVTVQVYPKSWSAIYIALDNVGMWNLRSESWARQYLGQQFYLRVYTASTSLRDEYPIPKNARLCGKAAG 298
            F+ V ++ G+W+   R  YNL D ++R  +QVYP SW+AI +  DN GMWNLRSE W + YLG+Q Y  V + S SLRDEY IP N  LCG   G
Sbjct:  451 FFAVAVEPGRWSPEKRKNYNLVDGLSRNNIQVYPNSWAAIMLTFDNAGMWNLRSEMWEKTYLGEQLYFSVLSPSRSLRDEYNIPDNHPLCGIVKG 545          
BLAST of EY684893 vs. ExPASy Swiss-Prot
Match: ASOL_BRANA (L-ascorbate oxidase homolog OS=Brassica napus GN=Bp10 PE=2 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 1.861e-22
Identity = 49/91 (53.85%), Postives = 62/91 (68.13%), Query Frame = 2
Query:   14 FWVVGMDGGQWTSASRNQYNLRDAVARVTVQVYPKSWSAIYIALDNVGMWNLRSESWARQYLGQQFYLRVYTASTSLRDEYPIPKNARLCG 286
            F+ V ++ G WT   R  YNL DAV+R TVQVYPK W+AI +  DN GMWN+RSE+  R+YLGQQ Y  V +   SLRDEY +P+ +  CG
Sbjct:  450 FFSVAVEPGTWTPEKRKNYNLLDAVSRHTVQVYPKCWAAILLTFDNCGMWNVRSENTERRYLGQQLYASVLSPEKSLRDEYNMPETSLQCG 540          
BLAST of EY684893 vs. ExPASy Swiss-Prot
Match: SKU5_ARATH (Monocopper oxidase-like protein SKU5 OS=Arabidopsis thaliana GN=SKU5 PE=1 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 2.275e-20
Identity = 47/91 (51.65%), Postives = 60/91 (65.93%), Query Frame = 2
Query:   14 FWVVGMDGGQWTSASRNQYNLRDAVARVTVQVYPKSWSAIYIALDNVGMWNLRSESWARQYLGQQFYLRVYTASTSLRDEYPIPKNARLCG 286
            F+VVGMD G+WT  SR  YN  D +AR T+QVYP +WSAI I+LDN G WNLR+E+    YLGQ+ Y+RV     + + E+  P N   CG
Sbjct:  458 FFVVGMDYGEWTENSRGTYNKWDGIARSTIQVYPGAWSAILISLDNPGAWNLRTENLDSWYLGQETYVRVVNPDENNKTEFGHPDNVLYCG 548          
BLAST of EY684893 vs. ExPASy Swiss-Prot
Match: SKS2_ARATH (Monocopper oxidase-like protein SKS2 OS=Arabidopsis thaliana GN=SKS2 PE=1 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 3.632e-18
Identity = 43/91 (47.25%), Postives = 59/91 (64.84%), Query Frame = 2
Query:   14 FWVVGMDGGQWTSASRNQYNLRDAVARVTVQVYPKSWSAIYIALDNVGMWNLRSESWARQYLGQQFYLRVYTASTSLRDEYPIPKNARLCG 286
            F+VV MD G W+    + YN  DAVAR TV+VYP +W+A+ I+LDNVG+WN+R E+  R YLGQ+ Y+R+     +   E   P+N   CG
Sbjct:  461 FYVVAMDFGIWSEDRNSSYNNWDAVARSTVEVYPGAWTAVLISLDNVGVWNIRVENLDRWYLGQETYMRIINPEENGSTEMDPPENVMYCG 551          
BLAST of EY684893 vs. ExPASy Swiss-Prot
Match: SKS1_ARATH (Monocopper oxidase-like protein SKS1 OS=Arabidopsis thaliana GN=SKS1 PE=1 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 1.057e-17
Identity = 40/91 (43.96%), Postives = 58/91 (63.74%), Query Frame = 2
Query:   14 FWVVGMDGGQWTSASRNQYNLRDAVARVTVQVYPKSWSAIYIALDNVGMWNLRSESWARQYLGQQFYLRVYTASTSLRDEYPIPKNARLCG 286
            F+VVGMD G W+   +  YN  DA++R T++VYP  W+A+ I+LDNVG+WN+R E+  R YLG++ Y+R+       + E   P N   CG
Sbjct:  461 FFVVGMDFGIWSEDKKGSYNNWDAISRSTIEVYPGGWTAVLISLDNVGVWNIRVENLDRWYLGEETYMRITNPEEDGKTEMDPPDNVLYCG 551          
The following BLAST results are available for this feature:
BLAST of EY684893 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 5
Match NameE-valueIdentityDescription
ASOL_TOBAC1.289e-2351.58L-ascorbate oxidase homolog OS=Nicotiana tabacum P... [more]
ASOL_BRANA1.861e-2253.85L-ascorbate oxidase homolog OS=Brassica napus GN=B... [more]
SKU5_ARATH2.275e-2051.65Monocopper oxidase-like protein SKU5 OS=Arabidopsi... [more]
SKS2_ARATH3.632e-1847.25Monocopper oxidase-like protein SKS2 OS=Arabidopsi... [more]
SKS1_ARATH1.057e-1743.96Monocopper oxidase-like protein SKS1 OS=Arabidopsi... [more]
back to top
Properties
Property NameValue
Genbank descriptionCS00-C2-003-005-A03-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY684893 ID=EY684893; Name=EY684893; organism=Citrus sinensis; type=EST; length=889bp
CCACGCGTCCGAATTTTGGGTTGTCGGCATGGATGGAGGCCAATGGACAT
CTGCTAGTAGAAACCAGTACAATCTCCGCGATGCAGTTGCCCGTGTAACC
GTTCAGGTGTATCCCAAGTCATGGTCTGCGATTTATATAGCACTGGATAA
CGTAGGTATGTGGAACTTGAGGTCTGAGTCTTGGGCACGACAGTACCTTG
GACAACAATTTTACTTGCGTGTTTACACAGCATCAACTTCACTAAGGGAT
GAATATCCCATCCCAAAGAATGCACGTCTTTGCGGCAAAGCAGCTGGCAG
ACACACGAGGCCCCTCTAAATTATTATTTAATAAAATGATCCACCGTTGG
GTACGCAATTTGTGGATTCGAGTAGAATTTTGATTTCTAATCTTATATTC
GATTAGTTTAATGTTGCTTTGCTTATTTATGCGAGGAGTGTGTACAAGTG
GAACTTGAAATTGACCCCAGCTCGAGGTCTCATTCTTTTCTATTGAAGGT
TGTATTTCCGTTGTTACAGCGGTAGCTGTTATAGCATTACTGTTAGTATT
ATTTAAAATTATGTTGATTCTCCTTTATCAATTTGATAATTGGCTCAACC
CTTTTCGTAGCCAACAAACACGCACAGAGAGAACAGGAAAGAGAAAACAA
AAAAGACTGCTAAGAACCGAATAACACGACCACACCCCCCCACCTACCGC
CAAGAGAAGAGCGCACCCCTCTCAACAACCCACTACGAGCCCCCAACACC
CCCAATAACCATCCGAACCAACAAACTCACACGAGAAAGGACATGCGGGC
GCGCCCTTACCATACGCGGTTCCGTATCAAAACCGTATCAACCCTCTCCC
CCATCCATTAACTGCCGTCGAACACAACACCGCATGGAC
back to top