EY684891

Overview
NameEY684891
Unique NameEY684891
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length913
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY684891 vs. ExPASy Swiss-Prot
Match: RS8_ORYSJ (40S ribosomal protein S8 OS=Oryza sativa subsp. japonica GN=RPS8 PE=2 SV=2)

HSP 1 Score: 209.149 bits (531), Expect = 2.766e-53
Identity = 105/124 (84.68%), Postives = 106/124 (85.48%), Query Frame = 3
Query:   66 MGISRDSMHXXXXXXXXXXXXXXXXXYELGRQPANTKLSSNKTVRRIRVRGGNVKWRALRLDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGVDIGR 437
            MGISRDSMH                 YELGRQPANTKLSSNKTVRR+RVRGGNVKWRALRLDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYL HYGVDIGR
Sbjct:    1 MGISRDSMHKRRATGGKQKAWRKKRKYELGRQPANTKLSSNKTVRRVRVRGGNVKWRALRLDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLTHYGVDIGR 124          
BLAST of EY684891 vs. ExPASy Swiss-Prot
Match: RS8_MAIZE (40S ribosomal protein S8 OS=Zea mays GN=RPS8 PE=2 SV=2)

HSP 1 Score: 209.149 bits (531), Expect = 2.766e-53
Identity = 105/124 (84.68%), Postives = 106/124 (85.48%), Query Frame = 3
Query:   66 MGISRDSMHXXXXXXXXXXXXXXXXXYELGRQPANTKLSSNKTVRRIRVRGGNVKWRALRLDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGVDIGR 437
            MGISRDSMH                 YELGRQPANTKLSSNKTVRR+RVRGGNVKWRALRLDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYL HYGVDIGR
Sbjct:    1 MGISRDSMHKRRATGGKQKAWRKKRKYELGRQPANTKLSSNKTVRRVRVRGGNVKWRALRLDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLTHYGVDIGR 124          
BLAST of EY684891 vs. ExPASy Swiss-Prot
Match: RS8_PRUAR (40S ribosomal protein S8 OS=Prunus armeniaca GN=RPS8 PE=2 SV=1)

HSP 1 Score: 207.994 bits (528), Expect = 6.161e-53
Identity = 104/124 (83.87%), Postives = 107/124 (86.29%), Query Frame = 3
Query:   66 MGISRDSMHXXXXXXXXXXXXXXXXXYELGRQPANTKLSSNKTVRRIRVRGGNVKWRALRLDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGVDIGR 437
            MGISRDSMH                 YELGRQPANTKLSSNKTVRRIRVRGGNVKWRALRLDTGN+SWGSEAVTRKTR+LDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV+IGR
Sbjct:    1 MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKLSSNKTVRRIRVRGGNVKWRALRLDTGNFSWGSEAVTRKTRLLDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGVEIGR 124          
BLAST of EY684891 vs. ExPASy Swiss-Prot
Match: RS82_ARATH (40S ribosomal protein S8-2 OS=Arabidopsis thaliana GN=RPS8B PE=2 SV=1)

HSP 1 Score: 202.216 bits (513), Expect = 3.381e-51
Identity = 103/124 (83.06%), Postives = 105/124 (84.68%), Query Frame = 3
Query:   66 MGISRDSMHXXXXXXXXXXXXXXXXXYELGRQPANTKLSSNKTVRRIRVRGGNVKWRALRLDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGVDIGR 437
            MGISRDS+H                 YELGRQPANTKLSSNKTVRRIRVRGGNVKWRALRLDTGN+SWGSEAVTRKTRILDV YNASNNELVRTQTLVKSAIVQVDAAPFKQ YLQHYGVDIGR
Sbjct:    1 MGISRDSIHKRRATGGKQKMWRKKRKYELGRQPANTKLSSNKTVRRIRVRGGNVKWRALRLDTGNFSWGSEAVTRKTRILDVAYNASNNELVRTQTLVKSAIVQVDAAPFKQGYLQHYGVDIGR 124          
BLAST of EY684891 vs. ExPASy Swiss-Prot
Match: RS81_ARATH (40S ribosomal protein S8-1 OS=Arabidopsis thaliana GN=RPS8A PE=2 SV=1)

HSP 1 Score: 201.83 bits (512), Expect = 4.416e-51
Identity = 99/124 (79.84%), Postives = 105/124 (84.68%), Query Frame = 3
Query:   66 MGISRDSMHXXXXXXXXXXXXXXXXXYELGRQPANTKLSSNKTVRRIRVRGGNVKWRALRLDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGVDIGR 437
            MGISRDS+H                 YE+GRQPANTKLSSNKTVRRIRVRGGNVKWRALRLDTGNYSWGSEA TRKTR+LDVVYNASNNELVRT+TLVKSAIVQVDAAPFKQWYL HYGV++GR
Sbjct:    1 MGISRDSIHKRRATGGKQKQWRKKRKYEMGRQPANTKLSSNKTVRRIRVRGGNVKWRALRLDTGNYSWGSEATTRKTRVLDVVYNASNNELVRTKTLVKSAIVQVDAAPFKQWYLSHYGVELGR 124          
BLAST of EY684891 vs. ExPASy Swiss-Prot
Match: RS8_THEPA (40S ribosomal protein S8 OS=Theileria parva GN=RPS8 PE=3 SV=1)

HSP 1 Score: 152.14 bits (383), Expect = 4.012e-36
Identity = 75/124 (60.48%), Postives = 93/124 (75.00%), Query Frame = 3
Query:   66 MGISRDSMHXXXXXXXXXXXXXXXXXYELGRQPANTKLSSNKTVRRIRVRGGNVKWRALRLDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGVDIGR 437
            MGISRDS H                 YELGR  +NTKL S K VR++R RGGN+K+RALRLD+GN+SWGS+ VTRKTR++DVVYNAS+NELVRT+TLVK+AIV VD  PFK W+  HYG+++G+
Sbjct:    1 MGISRDSRHKRRLTGGRYPVHKKKRKYELGRPSSNTKLGS-KLVRKVRCRGGNLKFRALRLDSGNFSWGSQNVTRKTRVMDVVYNASSNELVRTKTLVKNAIVTVDPTPFKLWFKTHYGLELGK 123          
BLAST of EY684891 vs. ExPASy Swiss-Prot
Match: RS8_ICTPU (40S ribosomal protein S8 OS=Ictalurus punctatus GN=rps8 PE=2 SV=3)

HSP 1 Score: 152.14 bits (383), Expect = 4.012e-36
Identity = 74/124 (59.68%), Postives = 89/124 (71.77%), Query Frame = 3
Query:   66 MGISRDSMHXXXXXXXXXXXXXXXXXYELGRQPANTKLSSNKTVRRIRVRGGNVKWRALRLDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGVDIGR 437
            MGISRD+ H                 YELGR P+NTKL   K +  +RVRGGN K+RALRLD GN+SWGSE  TRKTRI+DVVYNASNNELVRT+TLVK+ ++ VD+APF+QWY  HY + +GR
Sbjct:    1 MGISRDNWHKRRKTGGKRKPVHKKRKYELGRPPSNTKLGP-KRIHTVRVRGGNKKYRALRLDVGNFSWGSECCTRKTRIIDVVYNASNNELVRTKTLVKNCVILVDSAPFRQWYESHYALPLGR 123          
BLAST of EY684891 vs. ExPASy Swiss-Prot
Match: RS8_GRIJA (40S ribosomal protein S8 OS=Griffithsia japonica GN=RPS8 PE=2 SV=1)

HSP 1 Score: 150.984 bits (380), Expect = 8.938e-36
Identity = 75/124 (60.48%), Postives = 90/124 (72.58%), Query Frame = 3
Query:   66 MGISRDSMHXXXXXXXXXXXXXXXXXYELGRQPANTKLSSNKTVRRIRVRGGNVKWRALRLDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGVDIGR 437
            MGISRDS H                 YELGRQPA TK+   K VR +RVRGGN+K RALRL++GN++WGSEA T K+RIL+VVYNASNNELVRT T VK  I+Q+DA PF+Q+Y  HYG+DIG+
Sbjct:    1 MGISRDSRHKRRLTGGKHPYTCKKRKYELGRQPAMTKIGG-KLVRTVRVRGGNLKSRALRLESGNFAWGSEAFTSKSRILNVVYNASNNELVRTNTFVKGCIIQIDATPFRQYYHNHYGIDIGK 123          
BLAST of EY684891 vs. ExPASy Swiss-Prot
Match: RS8_THEAN (40S ribosomal protein S8 OS=Theileria annulata GN=RPS8 PE=3 SV=1)

HSP 1 Score: 149.058 bits (375), Expect = 3.397e-35
Identity = 74/122 (60.66%), Postives = 91/122 (74.59%), Query Frame = 3
Query:   66 MGISRDSMHXXXXXXXXXXXXXXXXXYELGRQPANTKLSSNKTVRRIRVRGGNVKWRALRLDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGVDI 431
            MGISRDS H                 YELGR  +NTKL S + VR++R RGGN+K+RALRLD+GN+SWGS+ VTRKTR++DVVYNAS+NELVRT+TLVK+AIV VD  PFK W+  HYGV++
Sbjct:    1 MGISRDSRHKRRLTGGRYPVHKKKRKYELGRPSSNTKLGS-RLVRKVRCRGGNLKFRALRLDSGNFSWGSQNVTRKTRVMDVVYNASSNELVRTKTLVKNAIVTVDPTPFKLWFKTHYGVEL 121          
BLAST of EY684891 vs. ExPASy Swiss-Prot
Match: RS8_APIME (40S ribosomal protein S8 OS=Apis mellifera GN=RpS8 PE=2 SV=2)

HSP 1 Score: 147.902 bits (372), Expect = 7.567e-35
Identity = 74/124 (59.68%), Postives = 87/124 (70.16%), Query Frame = 3
Query:   66 MGISRDSMHXXXXXXXXXXXXXXXXXYELGRQPANTKLSSNKTVRRIRVRGGNVKWRALRLDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGVDIGR 437
            MGISRD  H                 +ELGR  ANTKL   + +  +R RGGN K+RALRLDTGN+SWGSE  TRKTRI+DVVYNASNNELVRT+TLVK+AIV +DA PF+QWY  HY + +GR
Sbjct:    1 MGISRDHWHKRRATGGKRKPIRKKRKFELGRPAANTKLGPQR-IHTVRTRGGNKKYRALRLDTGNFSWGSECTTRKTRIIDVVYNASNNELVRTKTLVKNAIVTIDATPFRQWYEGHYVLPLGR 123          
The following BLAST results are available for this feature:
BLAST of EY684891 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 25
Match NameE-valueIdentityDescription
RS8_ORYSJ2.766e-5384.6840S ribosomal protein S8 OS=Oryza sativa subsp. ja... [more]
RS8_MAIZE2.766e-5384.6840S ribosomal protein S8 OS=Zea mays GN=RPS8 PE=2 ... [more]
RS8_PRUAR6.161e-5383.8740S ribosomal protein S8 OS=Prunus armeniaca GN=RP... [more]
RS82_ARATH3.381e-5183.0640S ribosomal protein S8-2 OS=Arabidopsis thaliana... [more]
RS81_ARATH4.416e-5179.8440S ribosomal protein S8-1 OS=Arabidopsis thaliana... [more]
RS8_THEPA4.012e-3660.4840S ribosomal protein S8 OS=Theileria parva GN=RPS... [more]
RS8_ICTPU4.012e-3659.6840S ribosomal protein S8 OS=Ictalurus punctatus GN... [more]
RS8_GRIJA8.938e-3660.4840S ribosomal protein S8 OS=Griffithsia japonica G... [more]
RS8_THEAN3.397e-3560.6640S ribosomal protein S8 OS=Theileria annulata GN=... [more]
RS8_APIME7.567e-3559.6840S ribosomal protein S8 OS=Apis mellifera GN=RpS8... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C2-003-005-A01-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY684891 ID=EY684891; Name=EY684891; organism=Citrus sinensis; type=EST; length=913bp
CAAACGCTGAATCACCTATCAATCGCCCACAGACAGAGAAACCCTAAGAA
TTTCTCTCTGCGAAAATGGGTATTTCCCGTGATTCCATGCACAAGAGGCG
TGCTACTGGGGGCAAGAAGAAGGCTTGGAGGAAGAAGAGAAAGTATGAGC
TTGGAAGGCAACCTGCAAATACTAAGCTATCAAGCAACAAGACAGTGAGG
AGGATTAGGGTTCGTGGAGGTAATGTGAAATGGCGTGCTTTGAGGCTTGA
CACAGGAAACTACTCCTGGGGAAGTGAAGCAGTGACTCGTAAGACCAGAA
TTCTGGATGTGGTATACAATGCCTCCAATAATGAGCTGGTCCGTACTCAA
ACTTTGGTGAAGAGTGCCATTGTTCAGGTTGATGCAGCACCATTCAAGCA
GTGGTATCTCCAGCATTATGGTGTTGACATTGGTCGCAAGAAGAAGGCTG
CAGCTGCTGCCACAACCAAGAAAGAAGGAGAGGAAGGAGAGGCTCCCGCC
ACTGAGGAGGCAAAGAAGAGCAACCCATGTCTCGAAGAAAGCTTGAAAAG
CGGTCAAAAAGATCGCACACTTGACCCCACATATTGAGGAGCAGTTTGGG
TAGTGGACGTTTGGTTACTTGAACTCCATCCCGAGCTGGCCCACGGGGGA
CGACGGCGAAGCAAAAATATTGACACGGGAACGACATAGATTCTCCACCC
TCCCAAACTCCCCCACGCACCCACCCGACGACCCGCCCCGCCTCCCCCCC
CCCGCCGCCCACCAACGCCCCAACCACCCGCATCCCCAACCTCCCCCCTC
CACACCGCCACCACACCTCACCCACCACCCGAGCGACCCGACCCCCACCC
ACCCCAGGCGACGCCTCCCCGTCCCTCAAAACCCGCGGCATCCTAACACA
GCCGAGCGCGAGA
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